Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4913 and Pf6N2E2_4914 are separated by 120 nucleotides Pf6N2E2_4914 and Pf6N2E2_4915 are separated by 35 nucleotides Pf6N2E2_4915 and Pf6N2E2_4916 are separated by 199 nucleotides Pf6N2E2_4916 and Pf6N2E2_4917 overlap by 4 nucleotides
Pf6N2E2_4913 - Predicted zinc-binding protein, at 5,669,419 to 5,669,997
_4913
Pf6N2E2_4914 - FIG00954755: hypothetical protein, at 5,670,118 to 5,670,510
_4914
Pf6N2E2_4915 - FIG000875: Thioredoxin domain-containing protein EC-YbbN, at 5,670,546 to 5,671,418
_4915
Pf6N2E2_4916 - Glutamate synthase [NADPH] large chain (EC 1.4.1.13), at 5,671,618 to 5,672,274
_4916
Pf6N2E2_4917 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 5,672,271 to 5,672,762
_4917
Position (kb)
5670
5671
5672 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 5669.579 kb on + strand, within Pf6N2E2_4913 at 5669.728 kb on + strand, within Pf6N2E2_4913 at 5669.729 kb on - strand, within Pf6N2E2_4913 at 5669.729 kb on - strand, within Pf6N2E2_4913 at 5670.022 kb on - strand at 5670.101 kb on + strand at 5670.102 kb on - strand at 5670.102 kb on - strand at 5670.102 kb on - strand at 5670.431 kb on + strand, within Pf6N2E2_4914 at 5670.431 kb on + strand, within Pf6N2E2_4914 at 5670.432 kb on - strand, within Pf6N2E2_4914 at 5670.432 kb on - strand, within Pf6N2E2_4914 at 5670.457 kb on + strand, within Pf6N2E2_4914 at 5670.457 kb on + strand, within Pf6N2E2_4914 at 5670.458 kb on - strand, within Pf6N2E2_4914 at 5670.458 kb on - strand, within Pf6N2E2_4914 at 5670.458 kb on - strand, within Pf6N2E2_4914 at 5670.487 kb on + strand at 5670.487 kb on + strand at 5670.487 kb on + strand at 5670.488 kb on - strand at 5670.547 kb on + strand at 5670.550 kb on + strand at 5670.550 kb on + strand at 5670.550 kb on + strand at 5670.550 kb on + strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.551 kb on - strand at 5670.577 kb on + strand at 5670.577 kb on + strand at 5670.577 kb on + strand at 5670.578 kb on - strand at 5670.655 kb on + strand, within Pf6N2E2_4915 at 5670.655 kb on + strand, within Pf6N2E2_4915 at 5670.656 kb on - strand, within Pf6N2E2_4915 at 5670.656 kb on - strand, within Pf6N2E2_4915 at 5670.706 kb on + strand, within Pf6N2E2_4915 at 5670.879 kb on + strand, within Pf6N2E2_4915 at 5670.879 kb on + strand, within Pf6N2E2_4915 at 5670.941 kb on - strand, within Pf6N2E2_4915 at 5671.255 kb on + strand, within Pf6N2E2_4915 at 5671.255 kb on + strand, within Pf6N2E2_4915 at 5671.255 kb on + strand, within Pf6N2E2_4915 at 5671.399 kb on + strand at 5671.399 kb on + strand at 5671.400 kb on - strand at 5671.400 kb on - strand at 5671.400 kb on - strand at 5671.430 kb on + strand at 5671.431 kb on - strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.452 kb on + strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.453 kb on - strand at 5671.454 kb on + strand at 5671.455 kb on - strand at 5671.455 kb on - strand at 5671.561 kb on - strand at 5671.561 kb on - strand at 5671.580 kb on + strand at 5671.580 kb on + strand at 5671.581 kb on - strand at 5671.581 kb on - strand at 5671.581 kb on - strand at 5671.637 kb on + strand at 5671.637 kb on + strand at 5671.638 kb on - strand at 5671.716 kb on - strand, within Pf6N2E2_4916 at 5671.814 kb on + strand, within Pf6N2E2_4916 at 5671.815 kb on - strand, within Pf6N2E2_4916 at 5672.021 kb on - strand, within Pf6N2E2_4916 at 5672.060 kb on + strand, within Pf6N2E2_4916 at 5672.061 kb on - strand, within Pf6N2E2_4916 at 5672.102 kb on + strand, within Pf6N2E2_4916
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 5,669,579 + Pf6N2E2_4913 0.28 -0.4 5,669,728 + Pf6N2E2_4913 0.53 +0.2 5,669,729 - Pf6N2E2_4913 0.54 +0.6 5,669,729 - Pf6N2E2_4913 0.54 +0.9 5,670,022 - +0.6 5,670,101 + -0.1 5,670,102 - -0.4 5,670,102 - +0.1 5,670,102 - +0.6 5,670,431 + Pf6N2E2_4914 0.80 -1.6 5,670,431 + Pf6N2E2_4914 0.80 -0.3 5,670,432 - Pf6N2E2_4914 0.80 +0.2 5,670,432 - Pf6N2E2_4914 0.80 +0.5 5,670,457 + Pf6N2E2_4914 0.86 -0.3 5,670,457 + Pf6N2E2_4914 0.86 +0.1 5,670,458 - Pf6N2E2_4914 0.87 -0.3 5,670,458 - Pf6N2E2_4914 0.87 -0.0 5,670,458 - Pf6N2E2_4914 0.87 -2.9 5,670,487 + -0.9 5,670,487 + +0.2 5,670,487 + +0.4 5,670,488 - +0.8 5,670,547 + -0.7 5,670,550 + +0.2 5,670,550 + -0.2 5,670,550 + +0.1 5,670,550 + +0.3 5,670,551 - +1.1 5,670,551 - +0.4 5,670,551 - +0.4 5,670,551 - -0.6 5,670,551 - -0.1 5,670,551 - +0.6 5,670,551 - +0.0 5,670,551 - +0.2 5,670,551 - -0.2 5,670,551 - +0.1 5,670,577 + -1.5 5,670,577 + -1.1 5,670,577 + -0.0 5,670,578 - -0.9 5,670,655 + Pf6N2E2_4915 0.12 -2.0 5,670,655 + Pf6N2E2_4915 0.12 -1.4 5,670,656 - Pf6N2E2_4915 0.13 -0.7 5,670,656 - Pf6N2E2_4915 0.13 -0.3 5,670,706 + Pf6N2E2_4915 0.18 -1.2 5,670,879 + Pf6N2E2_4915 0.38 -0.6 5,670,879 + Pf6N2E2_4915 0.38 -0.6 5,670,941 - Pf6N2E2_4915 0.45 -0.8 5,671,255 + Pf6N2E2_4915 0.81 -0.9 5,671,255 + Pf6N2E2_4915 0.81 -0.4 5,671,255 + Pf6N2E2_4915 0.81 -0.8 5,671,399 + -0.4 5,671,399 + -0.7 5,671,400 - -0.8 5,671,400 - -0.9 5,671,400 - -1.5 5,671,430 + -1.2 5,671,431 - +0.9 5,671,452 + -0.2 5,671,452 + -0.0 5,671,452 + -0.1 5,671,452 + -0.4 5,671,452 + +0.1 5,671,452 + -0.6 5,671,452 + -0.0 5,671,452 + -1.2 5,671,452 + -1.6 5,671,452 + -0.3 5,671,452 + -0.9 5,671,453 - +0.6 5,671,453 - -0.3 5,671,453 - +0.7 5,671,453 - +0.5 5,671,453 - +0.4 5,671,453 - +0.8 5,671,453 - +0.1 5,671,453 - -0.4 5,671,453 - +0.9 5,671,453 - +0.4 5,671,453 - +0.7 5,671,453 - +0.5 5,671,453 - +0.9 5,671,454 + -0.6 5,671,455 - -0.1 5,671,455 - +0.2 5,671,561 - +1.8 5,671,561 - +0.9 5,671,580 + -0.4 5,671,580 + +1.2 5,671,581 - +0.6 5,671,581 - -0.5 5,671,581 - -0.3 5,671,637 + -0.0 5,671,637 + -0.4 5,671,638 - +0.9 5,671,716 - Pf6N2E2_4916 0.15 +0.9 5,671,814 + Pf6N2E2_4916 0.30 +0.1 5,671,815 - Pf6N2E2_4916 0.30 +0.5 5,672,021 - Pf6N2E2_4916 0.61 +0.2 5,672,060 + Pf6N2E2_4916 0.67 +0.4 5,672,061 - Pf6N2E2_4916 0.67 +0.7 5,672,102 + Pf6N2E2_4916 0.74 +0.9
Or see this region's nucleotide sequence