Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_4239 and Pf6N2E2_4240 overlap by 1 nucleotides Pf6N2E2_4240 and Pf6N2E2_4241 overlap by 10 nucleotides
Pf6N2E2_4239 - Teichoic acid export ATP-binding protein TagH (EC 3.6.3.40), at 4,931,024 to 4,932,289
_4239
Pf6N2E2_4240 - O-antigen export system permease protein RfbD, at 4,932,289 to 4,933,086
_4240
Pf6N2E2_4241 - Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22), at 4,933,077 to 4,934,528
_4241
Position (kb)
4932
4933
4934 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4931.328 kb on + strand, within Pf6N2E2_4239 at 4931.329 kb on - strand, within Pf6N2E2_4239 at 4931.329 kb on - strand, within Pf6N2E2_4239 at 4931.329 kb on - strand, within Pf6N2E2_4239 at 4931.329 kb on - strand, within Pf6N2E2_4239 at 4931.329 kb on - strand, within Pf6N2E2_4239 at 4931.357 kb on + strand, within Pf6N2E2_4239 at 4931.358 kb on - strand, within Pf6N2E2_4239 at 4931.474 kb on + strand, within Pf6N2E2_4239 at 4931.474 kb on + strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.475 kb on - strand, within Pf6N2E2_4239 at 4931.583 kb on + strand, within Pf6N2E2_4239 at 4931.583 kb on + strand, within Pf6N2E2_4239 at 4931.584 kb on - strand, within Pf6N2E2_4239 at 4931.584 kb on - strand, within Pf6N2E2_4239 at 4931.584 kb on - strand, within Pf6N2E2_4239 at 4931.584 kb on - strand, within Pf6N2E2_4239 at 4931.584 kb on - strand, within Pf6N2E2_4239 at 4931.584 kb on - strand, within Pf6N2E2_4239 at 4931.584 kb on - strand, within Pf6N2E2_4239 at 4931.584 kb on - strand, within Pf6N2E2_4239 at 4931.586 kb on + strand, within Pf6N2E2_4239 at 4931.586 kb on + strand, within Pf6N2E2_4239 at 4931.587 kb on - strand, within Pf6N2E2_4239 at 4931.754 kb on + strand, within Pf6N2E2_4239 at 4931.754 kb on + strand, within Pf6N2E2_4239 at 4931.754 kb on + strand, within Pf6N2E2_4239 at 4931.755 kb on - strand, within Pf6N2E2_4239 at 4931.853 kb on + strand, within Pf6N2E2_4239 at 4931.853 kb on + strand, within Pf6N2E2_4239 at 4931.854 kb on - strand, within Pf6N2E2_4239 at 4931.854 kb on - strand, within Pf6N2E2_4239 at 4932.253 kb on - strand at 4932.253 kb on - strand at 4932.350 kb on - strand at 4932.350 kb on - strand at 4932.350 kb on - strand at 4932.407 kb on + strand, within Pf6N2E2_4240 at 4932.407 kb on + strand, within Pf6N2E2_4240 at 4932.407 kb on + strand, within Pf6N2E2_4240 at 4932.407 kb on + strand, within Pf6N2E2_4240 at 4932.408 kb on - strand, within Pf6N2E2_4240 at 4932.425 kb on + strand, within Pf6N2E2_4240 at 4932.425 kb on + strand, within Pf6N2E2_4240 at 4932.425 kb on + strand, within Pf6N2E2_4240 at 4932.426 kb on - strand, within Pf6N2E2_4240 at 4932.654 kb on + strand, within Pf6N2E2_4240 at 4932.654 kb on + strand, within Pf6N2E2_4240 at 4932.654 kb on + strand, within Pf6N2E2_4240 at 4932.654 kb on + strand, within Pf6N2E2_4240 at 4932.655 kb on - strand, within Pf6N2E2_4240 at 4932.655 kb on - strand, within Pf6N2E2_4240 at 4932.655 kb on - strand, within Pf6N2E2_4240 at 4932.869 kb on + strand, within Pf6N2E2_4240 at 4932.869 kb on + strand, within Pf6N2E2_4240 at 4932.870 kb on - strand, within Pf6N2E2_4240 at 4932.870 kb on - strand, within Pf6N2E2_4240 at 4932.878 kb on + strand, within Pf6N2E2_4240 at 4932.878 kb on + strand, within Pf6N2E2_4240 at 4932.879 kb on - strand, within Pf6N2E2_4240 at 4932.879 kb on - strand, within Pf6N2E2_4240 at 4932.941 kb on + strand, within Pf6N2E2_4240 at 4933.042 kb on - strand at 4933.042 kb on - strand at 4933.060 kb on + strand at 4933.067 kb on + strand at 4933.067 kb on + strand at 4933.067 kb on + strand at 4933.102 kb on + strand at 4933.103 kb on - strand at 4933.141 kb on + strand at 4933.141 kb on + strand at 4933.142 kb on - strand at 4933.142 kb on - strand at 4933.142 kb on - strand at 4933.401 kb on - strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.402 kb on + strand, within Pf6N2E2_4241 at 4933.403 kb on - strand, within Pf6N2E2_4241 at 4933.403 kb on - strand, within Pf6N2E2_4241 at 4933.403 kb on - strand, within Pf6N2E2_4241 at 4933.403 kb on - strand, within Pf6N2E2_4241 at 4933.403 kb on - strand, within Pf6N2E2_4241 at 4933.427 kb on + strand, within Pf6N2E2_4241 at 4933.428 kb on - strand, within Pf6N2E2_4241 at 4933.428 kb on - strand, within Pf6N2E2_4241 at 4933.428 kb on - strand, within Pf6N2E2_4241 at 4933.613 kb on + strand, within Pf6N2E2_4241 at 4933.753 kb on + strand, within Pf6N2E2_4241 at 4933.753 kb on + strand, within Pf6N2E2_4241 at 4933.753 kb on + strand, within Pf6N2E2_4241 at 4933.754 kb on - strand, within Pf6N2E2_4241 at 4933.754 kb on - strand, within Pf6N2E2_4241 at 4933.754 kb on - strand, within Pf6N2E2_4241 at 4933.754 kb on - strand, within Pf6N2E2_4241 at 4933.836 kb on - strand, within Pf6N2E2_4241 at 4933.963 kb on + strand, within Pf6N2E2_4241 at 4934.053 kb on + strand, within Pf6N2E2_4241 at 4934.053 kb on + strand, within Pf6N2E2_4241 at 4934.054 kb on - strand, within Pf6N2E2_4241 at 4934.054 kb on - strand, within Pf6N2E2_4241 at 4934.086 kb on - strand, within Pf6N2E2_4241
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 4,931,328 + Pf6N2E2_4239 0.24 +0.0 4,931,329 - Pf6N2E2_4239 0.24 +0.1 4,931,329 - Pf6N2E2_4239 0.24 +0.4 4,931,329 - Pf6N2E2_4239 0.24 -0.3 4,931,329 - Pf6N2E2_4239 0.24 +1.8 4,931,329 - Pf6N2E2_4239 0.24 +0.3 4,931,357 + Pf6N2E2_4239 0.26 +1.1 4,931,358 - Pf6N2E2_4239 0.26 -0.3 4,931,474 + Pf6N2E2_4239 0.36 +0.4 4,931,474 + Pf6N2E2_4239 0.36 -0.7 4,931,475 - Pf6N2E2_4239 0.36 -0.2 4,931,475 - Pf6N2E2_4239 0.36 +0.3 4,931,475 - Pf6N2E2_4239 0.36 +0.9 4,931,475 - Pf6N2E2_4239 0.36 +0.2 4,931,475 - Pf6N2E2_4239 0.36 -0.1 4,931,475 - Pf6N2E2_4239 0.36 +0.1 4,931,475 - Pf6N2E2_4239 0.36 -0.2 4,931,475 - Pf6N2E2_4239 0.36 +0.5 4,931,475 - Pf6N2E2_4239 0.36 +0.0 4,931,583 + Pf6N2E2_4239 0.44 +0.1 4,931,583 + Pf6N2E2_4239 0.44 -0.1 4,931,584 - Pf6N2E2_4239 0.44 -1.4 4,931,584 - Pf6N2E2_4239 0.44 +0.1 4,931,584 - Pf6N2E2_4239 0.44 +0.1 4,931,584 - Pf6N2E2_4239 0.44 +1.3 4,931,584 - Pf6N2E2_4239 0.44 +1.2 4,931,584 - Pf6N2E2_4239 0.44 +0.7 4,931,584 - Pf6N2E2_4239 0.44 +0.3 4,931,584 - Pf6N2E2_4239 0.44 +0.9 4,931,586 + Pf6N2E2_4239 0.44 -0.2 4,931,586 + Pf6N2E2_4239 0.44 -1.3 4,931,587 - Pf6N2E2_4239 0.44 +0.9 4,931,754 + Pf6N2E2_4239 0.58 -1.4 4,931,754 + Pf6N2E2_4239 0.58 -0.6 4,931,754 + Pf6N2E2_4239 0.58 -0.1 4,931,755 - Pf6N2E2_4239 0.58 -0.3 4,931,853 + Pf6N2E2_4239 0.65 -1.4 4,931,853 + Pf6N2E2_4239 0.65 -0.2 4,931,854 - Pf6N2E2_4239 0.66 -0.1 4,931,854 - Pf6N2E2_4239 0.66 +0.2 4,932,253 - -0.6 4,932,253 - +1.1 4,932,350 - -0.1 4,932,350 - +0.1 4,932,350 - +0.3 4,932,407 + Pf6N2E2_4240 0.15 -0.3 4,932,407 + Pf6N2E2_4240 0.15 +1.1 4,932,407 + Pf6N2E2_4240 0.15 -0.4 4,932,407 + Pf6N2E2_4240 0.15 -0.3 4,932,408 - Pf6N2E2_4240 0.15 +0.0 4,932,425 + Pf6N2E2_4240 0.17 -1.6 4,932,425 + Pf6N2E2_4240 0.17 +0.5 4,932,425 + Pf6N2E2_4240 0.17 +0.9 4,932,426 - Pf6N2E2_4240 0.17 +0.8 4,932,654 + Pf6N2E2_4240 0.46 +0.5 4,932,654 + Pf6N2E2_4240 0.46 -0.9 4,932,654 + Pf6N2E2_4240 0.46 -0.0 4,932,654 + Pf6N2E2_4240 0.46 -1.1 4,932,655 - Pf6N2E2_4240 0.46 +0.7 4,932,655 - Pf6N2E2_4240 0.46 +0.3 4,932,655 - Pf6N2E2_4240 0.46 -0.4 4,932,869 + Pf6N2E2_4240 0.73 -0.4 4,932,869 + Pf6N2E2_4240 0.73 -0.4 4,932,870 - Pf6N2E2_4240 0.73 -0.1 4,932,870 - Pf6N2E2_4240 0.73 +0.2 4,932,878 + Pf6N2E2_4240 0.74 -0.5 4,932,878 + Pf6N2E2_4240 0.74 +0.2 4,932,879 - Pf6N2E2_4240 0.74 -0.8 4,932,879 - Pf6N2E2_4240 0.74 +0.9 4,932,941 + Pf6N2E2_4240 0.82 +0.6 4,933,042 - -0.6 4,933,042 - +0.5 4,933,060 + +1.8 4,933,067 + +0.6 4,933,067 + -0.8 4,933,067 + -2.6 4,933,102 + -2.2 4,933,103 - +1.8 4,933,141 + -0.3 4,933,141 + -0.2 4,933,142 - +0.1 4,933,142 - -0.2 4,933,142 - -1.2 4,933,401 - Pf6N2E2_4241 0.22 +1.3 4,933,402 + Pf6N2E2_4241 0.22 +0.6 4,933,402 + Pf6N2E2_4241 0.22 -1.7 4,933,402 + Pf6N2E2_4241 0.22 +0.2 4,933,402 + Pf6N2E2_4241 0.22 -0.8 4,933,402 + Pf6N2E2_4241 0.22 +0.7 4,933,402 + Pf6N2E2_4241 0.22 -1.7 4,933,402 + Pf6N2E2_4241 0.22 +0.4 4,933,402 + Pf6N2E2_4241 0.22 -0.3 4,933,402 + Pf6N2E2_4241 0.22 -0.5 4,933,402 + Pf6N2E2_4241 0.22 -0.1 4,933,402 + Pf6N2E2_4241 0.22 +0.2 4,933,402 + Pf6N2E2_4241 0.22 +0.6 4,933,402 + Pf6N2E2_4241 0.22 +0.2 4,933,403 - Pf6N2E2_4241 0.22 +0.5 4,933,403 - Pf6N2E2_4241 0.22 +0.9 4,933,403 - Pf6N2E2_4241 0.22 +0.1 4,933,403 - Pf6N2E2_4241 0.22 -0.4 4,933,403 - Pf6N2E2_4241 0.22 +0.5 4,933,427 + Pf6N2E2_4241 0.24 +1.1 4,933,428 - Pf6N2E2_4241 0.24 -0.3 4,933,428 - Pf6N2E2_4241 0.24 -0.4 4,933,428 - Pf6N2E2_4241 0.24 +0.6 4,933,613 + Pf6N2E2_4241 0.37 -0.5 4,933,753 + Pf6N2E2_4241 0.47 -0.7 4,933,753 + Pf6N2E2_4241 0.47 +0.0 4,933,753 + Pf6N2E2_4241 0.47 +0.5 4,933,754 - Pf6N2E2_4241 0.47 +0.8 4,933,754 - Pf6N2E2_4241 0.47 -2.0 4,933,754 - Pf6N2E2_4241 0.47 +1.0 4,933,754 - Pf6N2E2_4241 0.47 -0.8 4,933,836 - Pf6N2E2_4241 0.52 +0.2 4,933,963 + Pf6N2E2_4241 0.61 +0.1 4,934,053 + Pf6N2E2_4241 0.67 +0.5 4,934,053 + Pf6N2E2_4241 0.67 -0.1 4,934,054 - Pf6N2E2_4241 0.67 -0.3 4,934,054 - Pf6N2E2_4241 0.67 +0.8 4,934,086 - Pf6N2E2_4241 0.69 -0.0
Or see this region's nucleotide sequence