Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_2133 and Pf6N2E2_2134 are separated by 107 nucleotides Pf6N2E2_2134 and Pf6N2E2_2135 are separated by 343 nucleotides
Pf6N2E2_2133 - Putative sulfate permease, at 2,538,427 to 2,539,212
_2133
Pf6N2E2_2134 - putative lipoprotein, at 2,539,320 to 2,540,069
_2134
Pf6N2E2_2135 - Aldose 1-epimerase (EC 5.1.3.3), at 2,540,413 to 2,541,519
_2135
Position (kb)
2539
2540
2541 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5
6
7
8 at 2538.428 kb on + strand at 2538.428 kb on + strand at 2538.428 kb on + strand at 2538.429 kb on - strand at 2538.429 kb on - strand at 2538.429 kb on - strand at 2538.498 kb on + strand at 2538.498 kb on + strand at 2538.499 kb on - strand at 2538.499 kb on - strand at 2538.499 kb on - strand at 2538.524 kb on + strand, within Pf6N2E2_2133 at 2538.524 kb on + strand, within Pf6N2E2_2133 at 2538.524 kb on + strand, within Pf6N2E2_2133 at 2538.525 kb on - strand, within Pf6N2E2_2133 at 2538.525 kb on - strand, within Pf6N2E2_2133 at 2538.675 kb on - strand, within Pf6N2E2_2133 at 2538.797 kb on + strand, within Pf6N2E2_2133 at 2538.797 kb on + strand, within Pf6N2E2_2133 at 2538.797 kb on + strand, within Pf6N2E2_2133 at 2538.797 kb on + strand, within Pf6N2E2_2133 at 2538.798 kb on - strand, within Pf6N2E2_2133 at 2538.798 kb on - strand, within Pf6N2E2_2133 at 2538.798 kb on - strand, within Pf6N2E2_2133 at 2538.798 kb on - strand, within Pf6N2E2_2133 at 2538.798 kb on - strand, within Pf6N2E2_2133 at 2539.050 kb on + strand, within Pf6N2E2_2133 at 2539.062 kb on - strand, within Pf6N2E2_2133 at 2539.062 kb on - strand, within Pf6N2E2_2133 at 2539.062 kb on - strand, within Pf6N2E2_2133 at 2539.075 kb on - strand, within Pf6N2E2_2133 at 2539.190 kb on - strand at 2539.214 kb on - strand at 2539.258 kb on + strand at 2539.272 kb on - strand at 2539.272 kb on - strand at 2539.363 kb on + strand at 2539.364 kb on - strand at 2539.600 kb on + strand, within Pf6N2E2_2134 at 2539.600 kb on + strand, within Pf6N2E2_2134 at 2539.600 kb on + strand, within Pf6N2E2_2134 at 2539.600 kb on + strand, within Pf6N2E2_2134 at 2539.601 kb on - strand, within Pf6N2E2_2134 at 2539.601 kb on - strand, within Pf6N2E2_2134 at 2539.601 kb on - strand, within Pf6N2E2_2134 at 2539.601 kb on - strand, within Pf6N2E2_2134 at 2539.651 kb on + strand, within Pf6N2E2_2134 at 2539.651 kb on + strand, within Pf6N2E2_2134 at 2539.651 kb on + strand, within Pf6N2E2_2134 at 2539.652 kb on - strand, within Pf6N2E2_2134 at 2539.652 kb on - strand, within Pf6N2E2_2134 at 2539.652 kb on - strand, within Pf6N2E2_2134 at 2539.652 kb on - strand, within Pf6N2E2_2134 at 2539.652 kb on - strand, within Pf6N2E2_2134 at 2539.699 kb on + strand, within Pf6N2E2_2134 at 2539.700 kb on - strand, within Pf6N2E2_2134 at 2539.700 kb on - strand, within Pf6N2E2_2134 at 2539.700 kb on - strand, within Pf6N2E2_2134 at 2539.700 kb on - strand, within Pf6N2E2_2134 at 2539.838 kb on - strand, within Pf6N2E2_2134 at 2539.838 kb on - strand, within Pf6N2E2_2134 at 2539.858 kb on + strand, within Pf6N2E2_2134 at 2539.858 kb on + strand, within Pf6N2E2_2134 at 2539.859 kb on - strand, within Pf6N2E2_2134 at 2540.274 kb on + strand at 2540.364 kb on + strand at 2540.364 kb on + strand at 2540.364 kb on + strand at 2540.364 kb on + strand at 2540.365 kb on - strand at 2540.365 kb on - strand at 2540.391 kb on + strand at 2540.452 kb on - strand at 2540.548 kb on + strand, within Pf6N2E2_2135 at 2540.549 kb on - strand, within Pf6N2E2_2135 at 2540.558 kb on + strand, within Pf6N2E2_2135 at 2540.558 kb on + strand, within Pf6N2E2_2135 at 2540.558 kb on + strand, within Pf6N2E2_2135 at 2540.559 kb on - strand, within Pf6N2E2_2135 at 2540.787 kb on + strand, within Pf6N2E2_2135 at 2540.905 kb on + strand, within Pf6N2E2_2135 at 2540.905 kb on + strand, within Pf6N2E2_2135 at 2540.906 kb on - strand, within Pf6N2E2_2135 at 2540.906 kb on - strand, within Pf6N2E2_2135 at 2540.942 kb on - strand, within Pf6N2E2_2135 at 2540.942 kb on - strand, within Pf6N2E2_2135 at 2540.992 kb on + strand, within Pf6N2E2_2135 at 2540.993 kb on - strand, within Pf6N2E2_2135 at 2541.061 kb on + strand, within Pf6N2E2_2135 at 2541.061 kb on + strand, within Pf6N2E2_2135 at 2541.062 kb on - strand, within Pf6N2E2_2135 at 2541.062 kb on - strand, within Pf6N2E2_2135
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 2,538,428 + +3.5 2,538,428 + +2.6 2,538,428 + +3.1 2,538,429 - +0.3 2,538,429 - +1.4 2,538,429 - +2.1 2,538,498 + +7.4 2,538,498 + +7.1 2,538,499 - +6.9 2,538,499 - +7.0 2,538,499 - +7.4 2,538,524 + Pf6N2E2_2133 0.12 +7.8 2,538,524 + Pf6N2E2_2133 0.12 +7.6 2,538,524 + Pf6N2E2_2133 0.12 +7.3 2,538,525 - Pf6N2E2_2133 0.12 +7.1 2,538,525 - Pf6N2E2_2133 0.12 +7.1 2,538,675 - Pf6N2E2_2133 0.32 +6.3 2,538,797 + Pf6N2E2_2133 0.47 +6.7 2,538,797 + Pf6N2E2_2133 0.47 +6.3 2,538,797 + Pf6N2E2_2133 0.47 +7.2 2,538,797 + Pf6N2E2_2133 0.47 +7.3 2,538,798 - Pf6N2E2_2133 0.47 +7.4 2,538,798 - Pf6N2E2_2133 0.47 +7.0 2,538,798 - Pf6N2E2_2133 0.47 +6.8 2,538,798 - Pf6N2E2_2133 0.47 +6.1 2,538,798 - Pf6N2E2_2133 0.47 +7.5 2,539,050 + Pf6N2E2_2133 0.79 +7.1 2,539,062 - Pf6N2E2_2133 0.81 +7.0 2,539,062 - Pf6N2E2_2133 0.81 +7.1 2,539,062 - Pf6N2E2_2133 0.81 +7.0 2,539,075 - Pf6N2E2_2133 0.82 +6.3 2,539,190 - +7.7 2,539,214 - +6.1 2,539,258 + +6.8 2,539,272 - +5.2 2,539,272 - +4.8 2,539,363 + +2.6 2,539,364 - +3.6 2,539,600 + Pf6N2E2_2134 0.37 +1.7 2,539,600 + Pf6N2E2_2134 0.37 +1.0 2,539,600 + Pf6N2E2_2134 0.37 +0.4 2,539,600 + Pf6N2E2_2134 0.37 +1.0 2,539,601 - Pf6N2E2_2134 0.37 +3.9 2,539,601 - Pf6N2E2_2134 0.37 +0.3 2,539,601 - Pf6N2E2_2134 0.37 +3.6 2,539,601 - Pf6N2E2_2134 0.37 +3.6 2,539,651 + Pf6N2E2_2134 0.44 +0.8 2,539,651 + Pf6N2E2_2134 0.44 +0.5 2,539,651 + Pf6N2E2_2134 0.44 -0.2 2,539,652 - Pf6N2E2_2134 0.44 +3.0 2,539,652 - Pf6N2E2_2134 0.44 +2.6 2,539,652 - Pf6N2E2_2134 0.44 +2.5 2,539,652 - Pf6N2E2_2134 0.44 +2.9 2,539,652 - Pf6N2E2_2134 0.44 +2.4 2,539,699 + Pf6N2E2_2134 0.51 -2.1 2,539,700 - Pf6N2E2_2134 0.51 +3.2 2,539,700 - Pf6N2E2_2134 0.51 +4.4 2,539,700 - Pf6N2E2_2134 0.51 +2.0 2,539,700 - Pf6N2E2_2134 0.51 +2.7 2,539,838 - Pf6N2E2_2134 0.69 +2.1 2,539,838 - Pf6N2E2_2134 0.69 +2.8 2,539,858 + Pf6N2E2_2134 0.72 -1.9 2,539,858 + Pf6N2E2_2134 0.72 -3.0 2,539,859 - Pf6N2E2_2134 0.72 +2.3 2,540,274 + -2.0 2,540,364 + -2.1 2,540,364 + -1.5 2,540,364 + -2.2 2,540,364 + -0.9 2,540,365 - +1.5 2,540,365 - +2.4 2,540,391 + -1.8 2,540,452 - +2.2 2,540,548 + Pf6N2E2_2135 0.12 -1.3 2,540,549 - Pf6N2E2_2135 0.12 +2.7 2,540,558 + Pf6N2E2_2135 0.13 -2.4 2,540,558 + Pf6N2E2_2135 0.13 -0.3 2,540,558 + Pf6N2E2_2135 0.13 -1.8 2,540,559 - Pf6N2E2_2135 0.13 +2.6 2,540,787 + Pf6N2E2_2135 0.34 -1.4 2,540,905 + Pf6N2E2_2135 0.44 -1.0 2,540,905 + Pf6N2E2_2135 0.44 -1.4 2,540,906 - Pf6N2E2_2135 0.45 +1.1 2,540,906 - Pf6N2E2_2135 0.45 +0.6 2,540,942 - Pf6N2E2_2135 0.48 +1.6 2,540,942 - Pf6N2E2_2135 0.48 +1.1 2,540,992 + Pf6N2E2_2135 0.52 -2.4 2,540,993 - Pf6N2E2_2135 0.52 +1.2 2,541,061 + Pf6N2E2_2135 0.59 -2.1 2,541,061 + Pf6N2E2_2135 0.59 -1.9 2,541,062 - Pf6N2E2_2135 0.59 +1.6 2,541,062 - Pf6N2E2_2135 0.59 +1.7
Or see this region's nucleotide sequence