Experiment: chromate 0.0000015625 M
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf6N2E2_1531 and Pf6N2E2_1532 are separated by 45 nucleotides Pf6N2E2_1532 and Pf6N2E2_1533 are separated by 28 nucleotides Pf6N2E2_1533 and Pf6N2E2_1534 are separated by 19 nucleotides
Pf6N2E2_1531 - FIG146518: Zn-dependent hydrolases, including glyoxylases, at 1,791,331 to 1,792,209
_1531
Pf6N2E2_1532 - FIG003847: Oxidoreductase (flavoprotein), at 1,792,255 to 1,793,925
_1532
Pf6N2E2_1533 - membrane protein, putative, at 1,793,954 to 1,794,757
_1533
Pf6N2E2_1534 - Probable transmembrane protein, at 1,794,777 to 1,795,235
_1534
Position (kb)
1792
1793
1794 Strain fitness (log2 ratio)
-2
-1
0
1 at 1791.277 kb on + strand at 1791.339 kb on - strand at 1791.466 kb on - strand, within Pf6N2E2_1531 at 1791.632 kb on + strand, within Pf6N2E2_1531 at 1791.633 kb on - strand, within Pf6N2E2_1531 at 1791.633 kb on - strand, within Pf6N2E2_1531 at 1791.633 kb on - strand, within Pf6N2E2_1531 at 1791.790 kb on + strand, within Pf6N2E2_1531 at 1791.790 kb on + strand, within Pf6N2E2_1531 at 1791.790 kb on + strand, within Pf6N2E2_1531 at 1791.790 kb on + strand, within Pf6N2E2_1531 at 1791.790 kb on + strand, within Pf6N2E2_1531 at 1791.790 kb on + strand, within Pf6N2E2_1531 at 1791.790 kb on + strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.791 kb on - strand, within Pf6N2E2_1531 at 1791.895 kb on - strand, within Pf6N2E2_1531 at 1791.895 kb on - strand, within Pf6N2E2_1531 at 1791.895 kb on - strand, within Pf6N2E2_1531 at 1791.950 kb on - strand, within Pf6N2E2_1531 at 1791.950 kb on - strand, within Pf6N2E2_1531 at 1791.950 kb on - strand, within Pf6N2E2_1531 at 1791.950 kb on - strand, within Pf6N2E2_1531 at 1792.181 kb on - strand at 1792.226 kb on + strand at 1792.441 kb on + strand, within Pf6N2E2_1532 at 1792.441 kb on + strand, within Pf6N2E2_1532 at 1792.441 kb on + strand, within Pf6N2E2_1532 at 1792.442 kb on - strand, within Pf6N2E2_1532 at 1792.531 kb on + strand, within Pf6N2E2_1532 at 1792.789 kb on - strand, within Pf6N2E2_1532 at 1792.789 kb on - strand, within Pf6N2E2_1532 at 1792.789 kb on - strand, within Pf6N2E2_1532 at 1792.813 kb on + strand, within Pf6N2E2_1532 at 1792.814 kb on - strand, within Pf6N2E2_1532 at 1792.817 kb on - strand, within Pf6N2E2_1532 at 1793.080 kb on + strand, within Pf6N2E2_1532 at 1793.080 kb on + strand, within Pf6N2E2_1532 at 1793.080 kb on + strand, within Pf6N2E2_1532 at 1793.081 kb on - strand, within Pf6N2E2_1532 at 1793.081 kb on - strand, within Pf6N2E2_1532 at 1793.081 kb on - strand, within Pf6N2E2_1532 at 1793.081 kb on - strand, within Pf6N2E2_1532 at 1793.086 kb on + strand, within Pf6N2E2_1532 at 1793.087 kb on - strand, within Pf6N2E2_1532 at 1793.101 kb on + strand, within Pf6N2E2_1532 at 1793.102 kb on - strand, within Pf6N2E2_1532 at 1793.200 kb on + strand, within Pf6N2E2_1532 at 1793.200 kb on + strand, within Pf6N2E2_1532 at 1793.200 kb on + strand, within Pf6N2E2_1532 at 1793.201 kb on - strand, within Pf6N2E2_1532 at 1793.201 kb on - strand, within Pf6N2E2_1532 at 1793.201 kb on - strand, within Pf6N2E2_1532 at 1793.201 kb on - strand, within Pf6N2E2_1532 at 1793.201 kb on - strand, within Pf6N2E2_1532 at 1793.296 kb on + strand, within Pf6N2E2_1532 at 1793.297 kb on - strand, within Pf6N2E2_1532 at 1793.329 kb on + strand, within Pf6N2E2_1532 at 1793.330 kb on - strand, within Pf6N2E2_1532 at 1793.355 kb on + strand, within Pf6N2E2_1532 at 1793.356 kb on - strand, within Pf6N2E2_1532 at 1793.421 kb on + strand, within Pf6N2E2_1532 at 1793.495 kb on + strand, within Pf6N2E2_1532 at 1793.554 kb on - strand, within Pf6N2E2_1532 at 1793.554 kb on - strand, within Pf6N2E2_1532 at 1793.652 kb on + strand, within Pf6N2E2_1532 at 1793.695 kb on + strand, within Pf6N2E2_1532 at 1793.761 kb on + strand at 1793.808 kb on + strand at 1793.838 kb on + strand at 1793.838 kb on + strand at 1793.838 kb on + strand at 1793.838 kb on + strand at 1793.838 kb on + strand at 1793.839 kb on - strand at 1793.839 kb on - strand at 1793.839 kb on - strand at 1793.863 kb on + strand at 1793.921 kb on + strand at 1793.921 kb on + strand at 1793.921 kb on + strand at 1793.922 kb on - strand at 1793.922 kb on - strand at 1794.024 kb on + strand at 1794.155 kb on + strand, within Pf6N2E2_1533 at 1794.272 kb on + strand, within Pf6N2E2_1533 at 1794.272 kb on + strand, within Pf6N2E2_1533 at 1794.272 kb on + strand, within Pf6N2E2_1533 at 1794.272 kb on + strand, within Pf6N2E2_1533 at 1794.272 kb on + strand, within Pf6N2E2_1533 at 1794.273 kb on - strand at 1794.273 kb on - strand, within Pf6N2E2_1533 at 1794.273 kb on - strand, within Pf6N2E2_1533 at 1794.273 kb on - strand, within Pf6N2E2_1533 at 1794.615 kb on + strand, within Pf6N2E2_1533 at 1794.686 kb on + strand at 1794.687 kb on - strand at 1794.741 kb on + strand at 1794.741 kb on + strand at 1794.772 kb on + strand at 1794.772 kb on + strand at 1794.825 kb on - strand, within Pf6N2E2_1534 at 1794.825 kb on - strand, within Pf6N2E2_1534
Per-strain Table
Position Strand Gene LocusTag Fraction chromate 0.0000015625 M remove 1,791,277 + +0.8 1,791,339 - -1.6 1,791,466 - Pf6N2E2_1531 0.15 -0.8 1,791,632 + Pf6N2E2_1531 0.34 +0.0 1,791,633 - Pf6N2E2_1531 0.34 -1.9 1,791,633 - Pf6N2E2_1531 0.34 -2.3 1,791,633 - Pf6N2E2_1531 0.34 +0.1 1,791,790 + Pf6N2E2_1531 0.52 +0.1 1,791,790 + Pf6N2E2_1531 0.52 -0.2 1,791,790 + Pf6N2E2_1531 0.52 +1.5 1,791,790 + Pf6N2E2_1531 0.52 +0.2 1,791,790 + Pf6N2E2_1531 0.52 +1.0 1,791,790 + Pf6N2E2_1531 0.52 -2.7 1,791,790 + Pf6N2E2_1531 0.52 +0.5 1,791,791 - Pf6N2E2_1531 0.52 +1.1 1,791,791 - Pf6N2E2_1531 0.52 +0.1 1,791,791 - Pf6N2E2_1531 0.52 -0.8 1,791,791 - Pf6N2E2_1531 0.52 -1.9 1,791,791 - Pf6N2E2_1531 0.52 -1.6 1,791,791 - Pf6N2E2_1531 0.52 -1.0 1,791,791 - Pf6N2E2_1531 0.52 -1.9 1,791,791 - Pf6N2E2_1531 0.52 -0.2 1,791,791 - Pf6N2E2_1531 0.52 +0.8 1,791,791 - Pf6N2E2_1531 0.52 +0.0 1,791,791 - Pf6N2E2_1531 0.52 -0.5 1,791,791 - Pf6N2E2_1531 0.52 -2.3 1,791,791 - Pf6N2E2_1531 0.52 +0.2 1,791,791 - Pf6N2E2_1531 0.52 +0.5 1,791,791 - Pf6N2E2_1531 0.52 -0.7 1,791,895 - Pf6N2E2_1531 0.64 -1.2 1,791,895 - Pf6N2E2_1531 0.64 -0.1 1,791,895 - Pf6N2E2_1531 0.64 -2.2 1,791,950 - Pf6N2E2_1531 0.70 -1.4 1,791,950 - Pf6N2E2_1531 0.70 +0.0 1,791,950 - Pf6N2E2_1531 0.70 -0.6 1,791,950 - Pf6N2E2_1531 0.70 -0.8 1,792,181 - -0.1 1,792,226 + +1.1 1,792,441 + Pf6N2E2_1532 0.11 -1.2 1,792,441 + Pf6N2E2_1532 0.11 -0.8 1,792,441 + Pf6N2E2_1532 0.11 +0.4 1,792,442 - Pf6N2E2_1532 0.11 -0.8 1,792,531 + Pf6N2E2_1532 0.17 -1.1 1,792,789 - Pf6N2E2_1532 0.32 -0.1 1,792,789 - Pf6N2E2_1532 0.32 -0.1 1,792,789 - Pf6N2E2_1532 0.32 -1.3 1,792,813 + Pf6N2E2_1532 0.33 -0.7 1,792,814 - Pf6N2E2_1532 0.33 -0.2 1,792,817 - Pf6N2E2_1532 0.34 -1.4 1,793,080 + Pf6N2E2_1532 0.49 +0.8 1,793,080 + Pf6N2E2_1532 0.49 -2.7 1,793,080 + Pf6N2E2_1532 0.49 -0.6 1,793,081 - Pf6N2E2_1532 0.49 -0.3 1,793,081 - Pf6N2E2_1532 0.49 +0.3 1,793,081 - Pf6N2E2_1532 0.49 -0.6 1,793,081 - Pf6N2E2_1532 0.49 -0.3 1,793,086 + Pf6N2E2_1532 0.50 +0.3 1,793,087 - Pf6N2E2_1532 0.50 -0.1 1,793,101 + Pf6N2E2_1532 0.51 -0.9 1,793,102 - Pf6N2E2_1532 0.51 -0.2 1,793,200 + Pf6N2E2_1532 0.57 -0.4 1,793,200 + Pf6N2E2_1532 0.57 -1.8 1,793,200 + Pf6N2E2_1532 0.57 -1.0 1,793,201 - Pf6N2E2_1532 0.57 -2.2 1,793,201 - Pf6N2E2_1532 0.57 -1.7 1,793,201 - Pf6N2E2_1532 0.57 -0.7 1,793,201 - Pf6N2E2_1532 0.57 -0.3 1,793,201 - Pf6N2E2_1532 0.57 +0.6 1,793,296 + Pf6N2E2_1532 0.62 -0.3 1,793,297 - Pf6N2E2_1532 0.62 -1.2 1,793,329 + Pf6N2E2_1532 0.64 -0.7 1,793,330 - Pf6N2E2_1532 0.64 -0.4 1,793,355 + Pf6N2E2_1532 0.66 -0.8 1,793,356 - Pf6N2E2_1532 0.66 -2.2 1,793,421 + Pf6N2E2_1532 0.70 +0.0 1,793,495 + Pf6N2E2_1532 0.74 -0.3 1,793,554 - Pf6N2E2_1532 0.78 -0.4 1,793,554 - Pf6N2E2_1532 0.78 -0.9 1,793,652 + Pf6N2E2_1532 0.84 -1.6 1,793,695 + Pf6N2E2_1532 0.86 -2.2 1,793,761 + -0.6 1,793,808 + -0.9 1,793,838 + -0.1 1,793,838 + -1.4 1,793,838 + -0.6 1,793,838 + -1.5 1,793,838 + -1.8 1,793,839 - -1.7 1,793,839 - +0.6 1,793,839 - -0.3 1,793,863 + -2.3 1,793,921 + -1.4 1,793,921 + -0.6 1,793,921 + -0.1 1,793,922 - +0.7 1,793,922 - -1.0 1,794,024 + -1.5 1,794,155 + Pf6N2E2_1533 0.25 -0.7 1,794,272 + Pf6N2E2_1533 0.40 -0.3 1,794,272 + Pf6N2E2_1533 0.40 +1.1 1,794,272 + Pf6N2E2_1533 0.40 -0.2 1,794,272 + Pf6N2E2_1533 0.40 +0.5 1,794,272 + Pf6N2E2_1533 0.40 +1.0 1,794,273 - +1.0 1,794,273 - Pf6N2E2_1533 0.40 -0.2 1,794,273 - Pf6N2E2_1533 0.40 -0.7 1,794,273 - Pf6N2E2_1533 0.40 +0.6 1,794,615 + Pf6N2E2_1533 0.82 +0.9 1,794,686 + -0.9 1,794,687 - -0.4 1,794,741 + -0.5 1,794,741 + +0.4 1,794,772 + +0.1 1,794,772 + +0.3 1,794,825 - Pf6N2E2_1534 0.10 +0.2 1,794,825 - Pf6N2E2_1534 0.10 +0.4
Or see this region's nucleotide sequence