Strain Fitness in Marinobacter adhaerens HP15 around HP15_1382

Experiment: m.b. 40C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1380 and HP15_1381 are separated by 107 nucleotidesHP15_1381 and HP15_1382 are separated by 61 nucleotidesHP15_1382 and HP15_tRNA26 are separated by 56 nucleotidesHP15_tRNA26 and HP15_1383 are separated by 114 nucleotides HP15_1380: HP15_1380 - conserved hypothetical protein, secreted, at 1,455,510 to 1,456,118 _1380 HP15_1381: HP15_1381 - conserved hypothetical protein, at 1,456,226 to 1,456,711 _1381 HP15_1382: HP15_1382 - M18-family aminopeptidase 2, at 1,456,773 to 1,458,122 _1382 HP15_tRNA26: HP15_tRNA26 - tRNA-Asn, at 1,458,179 to 1,458,254 _tRNA26 HP15_1383: HP15_1383 - AB-hydrolase YheT, putative, at 1,458,369 to 1,459,292 _1383 Position (kb) 1456 1457 1458 1459Strain fitness (log2 ratio) -3 -2 -1 0 1at 1455.792 kb on + strand, within HP15_1380at 1455.792 kb on + strand, within HP15_1380at 1455.800 kb on - strand, within HP15_1380at 1455.800 kb on - strand, within HP15_1380at 1455.846 kb on + strand, within HP15_1380at 1455.847 kb on - strand, within HP15_1380at 1456.044 kb on - strand, within HP15_1380at 1456.089 kb on + strandat 1456.097 kb on - strandat 1456.108 kb on + strandat 1456.116 kb on - strandat 1456.199 kb on - strandat 1456.238 kb on + strandat 1456.251 kb on - strandat 1456.771 kb on + strandat 1456.779 kb on - strandat 1456.845 kb on + strandat 1457.164 kb on + strand, within HP15_1382at 1457.457 kb on + strand, within HP15_1382at 1457.464 kb on - strand, within HP15_1382at 1457.465 kb on - strand, within HP15_1382at 1457.625 kb on + strand, within HP15_1382at 1457.693 kb on - strand, within HP15_1382at 1457.717 kb on - strand, within HP15_1382at 1457.831 kb on + strand, within HP15_1382at 1457.831 kb on + strand, within HP15_1382at 1458.013 kb on - strandat 1458.393 kb on + strandat 1458.482 kb on - strand, within HP15_1383at 1458.630 kb on + strand, within HP15_1383at 1458.697 kb on - strand, within HP15_1383at 1458.754 kb on + strand, within HP15_1383at 1459.066 kb on - strand, within HP15_1383at 1459.068 kb on - strand, within HP15_1383

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 40C
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1,455,792 + HP15_1380 0.46 +0.6
1,455,792 + HP15_1380 0.46 -0.1
1,455,800 - HP15_1380 0.48 +0.9
1,455,800 - HP15_1380 0.48 -0.2
1,455,846 + HP15_1380 0.55 -0.2
1,455,847 - HP15_1380 0.55 +0.7
1,456,044 - HP15_1380 0.88 +1.1
1,456,089 + -0.2
1,456,097 - +0.2
1,456,108 + -1.5
1,456,116 - -0.3
1,456,199 - -0.1
1,456,238 + -2.6
1,456,251 - -1.9
1,456,771 + +1.0
1,456,779 - +0.6
1,456,845 + -0.6
1,457,164 + HP15_1382 0.29 -1.1
1,457,457 + HP15_1382 0.51 -1.9
1,457,464 - HP15_1382 0.51 -3.6
1,457,465 - HP15_1382 0.51 -2.9
1,457,625 + HP15_1382 0.63 +0.7
1,457,693 - HP15_1382 0.68 +0.7
1,457,717 - HP15_1382 0.70 -1.5
1,457,831 + HP15_1382 0.78 -2.1
1,457,831 + HP15_1382 0.78 -0.6
1,458,013 - -2.6
1,458,393 + -0.7
1,458,482 - HP15_1383 0.12 +0.4
1,458,630 + HP15_1383 0.28 -0.6
1,458,697 - HP15_1383 0.35 +0.1
1,458,754 + HP15_1383 0.42 +0.2
1,459,066 - HP15_1383 0.75 -0.7
1,459,068 - HP15_1383 0.76 -0.7

Or see this region's nucleotide sequence