Experiment: m.b. 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_310 and HP15_311 are separated by 338 nucleotides HP15_311 and HP15_312 are separated by 19 nucleotides
HP15_310: HP15_310 - signal transduction protein, at 301,767 to 303,131
_310
HP15_311: HP15_311 - protein containing domain of unknown function DUF2489, at 303,470 to 303,931
_311
HP15_312: HP15_312 - protein containing Molybdopterin oxidoreductase/molybdopterin dinucleotide-binding region, at 303,951 to 306,245
_312
Position (kb) 303
304 Strain fitness (log2 ratio) -1
0
1
2
3 at 302.495 kb on + strand, within HP15_310 at 302.655 kb on - strand, within HP15_310 at 302.681 kb on - strand, within HP15_310 at 302.738 kb on - strand, within HP15_310 at 302.778 kb on - strand, within HP15_310 at 302.881 kb on + strand, within HP15_310 at 303.224 kb on - strand at 303.357 kb on + strand at 303.443 kb on + strand at 303.634 kb on - strand, within HP15_311 at 303.795 kb on + strand, within HP15_311 at 303.802 kb on - strand, within HP15_311 at 303.805 kb on + strand, within HP15_311 at 303.818 kb on - strand, within HP15_311 at 303.957 kb on - strand at 303.957 kb on - strand at 303.966 kb on - strand at 303.986 kb on - strand at 304.056 kb on - strand at 304.085 kb on - strand at 304.101 kb on + strand at 304.288 kb on + strand, within HP15_312 at 304.432 kb on + strand, within HP15_312 at 304.433 kb on + strand, within HP15_312 at 304.493 kb on + strand, within HP15_312 at 304.529 kb on + strand, within HP15_312 at 304.570 kb on + strand, within HP15_312 at 304.650 kb on + strand, within HP15_312 at 304.712 kb on + strand, within HP15_312 at 304.735 kb on - strand, within HP15_312 at 304.761 kb on - strand, within HP15_312 at 304.782 kb on - strand, within HP15_312 at 304.795 kb on + strand, within HP15_312 at 304.846 kb on + strand, within HP15_312 at 304.864 kb on - strand, within HP15_312
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 37C remove 302,495 + HP15_310 0.53 +0.6 302,655 - HP15_310 0.65 +1.3 302,681 - HP15_310 0.67 -0.1 302,738 - HP15_310 0.71 -0.8 302,778 - HP15_310 0.74 +1.2 302,881 + HP15_310 0.82 +0.2 303,224 - -0.4 303,357 + -0.1 303,443 + -0.2 303,634 - HP15_311 0.35 -1.3 303,795 + HP15_311 0.70 +1.2 303,802 - HP15_311 0.72 +0.6 303,805 + HP15_311 0.73 +1.5 303,818 - HP15_311 0.75 +0.0 303,957 - -0.4 303,957 - -0.4 303,966 - -0.3 303,986 - +0.6 304,056 - -0.9 304,085 - -0.6 304,101 + -0.2 304,288 + HP15_312 0.15 -0.3 304,432 + HP15_312 0.21 +0.4 304,433 + HP15_312 0.21 -0.3 304,493 + HP15_312 0.24 -0.2 304,529 + HP15_312 0.25 +2.9 304,570 + HP15_312 0.27 +0.8 304,650 + HP15_312 0.30 -0.4 304,712 + HP15_312 0.33 -0.0 304,735 - HP15_312 0.34 -0.9 304,761 - HP15_312 0.35 +0.1 304,782 - HP15_312 0.36 +1.5 304,795 + HP15_312 0.37 -0.6 304,846 + HP15_312 0.39 -0.6 304,864 - HP15_312 0.40 -1.5
Or see this region's nucleotide sequence