Strain Fitness in Marinobacter adhaerens HP15 around HP15_2984

Experiment: m.b. 37C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2983 and HP15_2984 are separated by 454 nucleotidesHP15_2984 and HP15_2985 are separated by 207 nucleotidesHP15_2985 and HP15_2986 are separated by 12 nucleotides HP15_2983: HP15_2983 - peptidase, U32 family, at 3,125,559 to 3,126,956 _2983 HP15_2984: HP15_2984 - cysteine desulfurase activator complex subunit SufB, at 3,127,411 to 3,128,883 _2984 HP15_2985: HP15_2985 - FeS assembly ATPase SufC, at 3,129,091 to 3,129,864 _2985 HP15_2986: HP15_2986 - FeS assembly protein SufD, at 3,129,877 to 3,131,163 _2986 Position (kb) 3127 3128 3129Strain fitness (log2 ratio) -1 0 1at 3126.508 kb on + strand, within HP15_2983at 3126.518 kb on - strand, within HP15_2983at 3126.593 kb on + strand, within HP15_2983at 3126.616 kb on - strand, within HP15_2983at 3126.636 kb on - strand, within HP15_2983at 3126.652 kb on + strand, within HP15_2983at 3126.653 kb on - strand, within HP15_2983at 3126.771 kb on + strand, within HP15_2983at 3126.802 kb on - strand, within HP15_2983at 3126.837 kb on + strandat 3126.849 kb on + strandat 3126.920 kb on + strandat 3127.070 kb on + strandat 3127.078 kb on - strandat 3127.078 kb on - strandat 3127.078 kb on - strandat 3127.159 kb on + strandat 3127.448 kb on + strandat 3128.885 kb on + strandat 3128.885 kb on + strandat 3128.900 kb on + strandat 3129.849 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 37C
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3,126,508 + HP15_2983 0.68 +0.1
3,126,518 - HP15_2983 0.69 -0.3
3,126,593 + HP15_2983 0.74 -0.6
3,126,616 - HP15_2983 0.76 -0.5
3,126,636 - HP15_2983 0.77 -0.4
3,126,652 + HP15_2983 0.78 +1.1
3,126,653 - HP15_2983 0.78 -0.5
3,126,771 + HP15_2983 0.87 +0.9
3,126,802 - HP15_2983 0.89 -0.1
3,126,837 + +0.2
3,126,849 + +1.1
3,126,920 + -0.3
3,127,070 + -1.1
3,127,078 - +0.3
3,127,078 - +1.3
3,127,078 - -0.7
3,127,159 + -1.2
3,127,448 + -1.6
3,128,885 + +1.1
3,128,885 + +0.9
3,128,900 + -0.5
3,129,849 + -0.2

Or see this region's nucleotide sequence