Strain Fitness in Marinobacter adhaerens HP15 around HP15_2980

Experiment: m.b. 37C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_2979 and HP15_2980 are separated by 165 nucleotidesHP15_2980 and HP15_2981 are separated by 11 nucleotides HP15_2979: HP15_2979 - NnrS family protein, at 3,122,027 to 3,123,211 _2979 HP15_2980: HP15_2980 - 3-hydroxydecanoyl-ACP dehydratase, at 3,123,377 to 3,123,886 _2980 HP15_2981: HP15_2981 - 3-oxoacyl-(acyl-carrier-protein) synthase I, at 3,123,898 to 3,125,109 _2981 Position (kb) 3123 3124Strain fitness (log2 ratio) -3 -2 -1 0 1at 3122.394 kb on - strand, within HP15_2979at 3122.505 kb on - strand, within HP15_2979at 3122.548 kb on - strand, within HP15_2979at 3122.548 kb on - strand, within HP15_2979at 3122.560 kb on + strand, within HP15_2979at 3122.560 kb on + strand, within HP15_2979at 3122.561 kb on - strand, within HP15_2979at 3122.568 kb on - strand, within HP15_2979at 3122.568 kb on - strand, within HP15_2979at 3122.578 kb on + strand, within HP15_2979at 3122.581 kb on - strand, within HP15_2979at 3122.581 kb on - strand, within HP15_2979at 3122.586 kb on - strand, within HP15_2979at 3122.611 kb on + strand, within HP15_2979at 3122.625 kb on + strand, within HP15_2979at 3122.657 kb on + strand, within HP15_2979at 3122.670 kb on - strand, within HP15_2979at 3122.687 kb on + strand, within HP15_2979at 3122.715 kb on + strand, within HP15_2979at 3122.767 kb on - strand, within HP15_2979at 3122.848 kb on + strand, within HP15_2979at 3123.029 kb on + strand, within HP15_2979at 3123.127 kb on + strandat 3123.127 kb on + strandat 3123.155 kb on - strandat 3123.183 kb on + strandat 3124.025 kb on - strand, within HP15_2981at 3124.113 kb on + strand, within HP15_2981at 3124.114 kb on + strand, within HP15_2981at 3124.142 kb on - strand, within HP15_2981at 3124.173 kb on + strand, within HP15_2981at 3124.377 kb on - strand, within HP15_2981at 3124.738 kb on - strand, within HP15_2981at 3124.790 kb on + strand, within HP15_2981

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 37C
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3,122,394 - HP15_2979 0.31 +0.2
3,122,505 - HP15_2979 0.40 -0.1
3,122,548 - HP15_2979 0.44 +1.5
3,122,548 - HP15_2979 0.44 +1.4
3,122,560 + HP15_2979 0.45 +0.7
3,122,560 + HP15_2979 0.45 -0.1
3,122,561 - HP15_2979 0.45 +0.0
3,122,568 - HP15_2979 0.46 +1.0
3,122,568 - HP15_2979 0.46 +0.3
3,122,578 + HP15_2979 0.46 +1.4
3,122,581 - HP15_2979 0.47 -1.5
3,122,581 - HP15_2979 0.47 +0.8
3,122,586 - HP15_2979 0.47 -0.4
3,122,611 + HP15_2979 0.49 -0.5
3,122,625 + HP15_2979 0.50 -0.7
3,122,657 + HP15_2979 0.53 +1.0
3,122,670 - HP15_2979 0.54 +1.2
3,122,687 + HP15_2979 0.56 +0.8
3,122,715 + HP15_2979 0.58 -0.2
3,122,767 - HP15_2979 0.62 -0.4
3,122,848 + HP15_2979 0.69 +0.0
3,123,029 + HP15_2979 0.85 -0.6
3,123,127 + +0.8
3,123,127 + -0.3
3,123,155 - +1.1
3,123,183 + -0.4
3,124,025 - HP15_2981 0.10 -1.7
3,124,113 + HP15_2981 0.18 +0.4
3,124,114 + HP15_2981 0.18 -2.9
3,124,142 - HP15_2981 0.20 -0.6
3,124,173 + HP15_2981 0.23 -1.2
3,124,377 - HP15_2981 0.40 -1.9
3,124,738 - HP15_2981 0.69 -1.9
3,124,790 + HP15_2981 0.74 -2.5

Or see this region's nucleotide sequence