Experiment: m.b. 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_275 and HP15_276 are separated by 381 nucleotides HP15_276 and HP15_277 are separated by 21 nucleotides HP15_277 and HP15_278 are separated by 72 nucleotides HP15_278 and HP15_279 are separated by 17 nucleotides
HP15_275: HP15_275 - nitrogen regulatory protein PII, at 267,379 to 267,717
_275
HP15_276: HP15_276 - protein containing DUF526, at 268,099 to 268,353
_276
HP15_277: HP15_277 - Mg-chelatase subunits D/I family, ComM subfamily protein, at 268,375 to 269,949
_277
HP15_278: HP15_278 - tRNA (guanine-N(7)-)-methyltransferase, at 270,022 to 270,753
_278
HP15_279: HP15_279 - conserved hypothetical protein, membrane, at 270,771 to 271,286
_279
Position (kb) 268
269
270 Strain fitness (log2 ratio) -1
0
1
2 at 267.376 kb on + strand at 267.385 kb on - strand at 267.994 kb on + strand at 268.009 kb on - strand at 268.020 kb on + strand at 268.096 kb on + strand at 268.098 kb on + strand at 268.450 kb on + strand at 268.535 kb on + strand, within HP15_277 at 268.693 kb on + strand, within HP15_277 at 268.693 kb on + strand, within HP15_277 at 268.756 kb on + strand, within HP15_277 at 268.864 kb on - strand, within HP15_277 at 268.949 kb on - strand, within HP15_277 at 268.951 kb on + strand, within HP15_277 at 268.969 kb on + strand, within HP15_277 at 268.971 kb on - strand, within HP15_277 at 269.038 kb on - strand, within HP15_277 at 269.097 kb on - strand, within HP15_277 at 269.098 kb on + strand, within HP15_277 at 269.136 kb on + strand, within HP15_277 at 269.310 kb on - strand, within HP15_277 at 269.487 kb on + strand, within HP15_277 at 269.544 kb on + strand, within HP15_277 at 269.564 kb on + strand, within HP15_277 at 269.576 kb on + strand, within HP15_277 at 269.577 kb on - strand, within HP15_277 at 269.590 kb on + strand, within HP15_277 at 269.620 kb on + strand, within HP15_277 at 269.647 kb on + strand, within HP15_277 at 269.647 kb on + strand, within HP15_277 at 269.705 kb on - strand, within HP15_277 at 269.786 kb on + strand, within HP15_277 at 269.938 kb on - strand at 269.970 kb on - strand at 270.091 kb on + strand at 270.098 kb on + strand, within HP15_278 at 270.264 kb on - strand, within HP15_278 at 270.324 kb on + strand, within HP15_278 at 270.342 kb on + strand, within HP15_278 at 270.397 kb on - strand, within HP15_278 at 270.458 kb on + strand, within HP15_278 at 270.520 kb on - strand, within HP15_278 at 270.536 kb on + strand, within HP15_278 at 270.537 kb on + strand, within HP15_278 at 270.770 kb on - strand at 270.775 kb on - strand at 270.855 kb on - strand, within HP15_279 at 270.866 kb on + strand, within HP15_279 at 270.876 kb on - strand, within HP15_279 at 270.878 kb on + strand, within HP15_279 at 270.926 kb on + strand, within HP15_279 at 270.934 kb on + strand, within HP15_279
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 37C remove 267,376 + +0.8 267,385 - -0.2 267,994 + -0.5 268,009 - +0.7 268,020 + +0.5 268,096 + +1.2 268,098 + +0.7 268,450 + -0.8 268,535 + HP15_277 0.10 -0.0 268,693 + HP15_277 0.20 +1.0 268,693 + HP15_277 0.20 -0.1 268,756 + HP15_277 0.24 -0.3 268,864 - HP15_277 0.31 +1.9 268,949 - HP15_277 0.36 -0.1 268,951 + HP15_277 0.37 -1.0 268,969 + HP15_277 0.38 +0.3 268,971 - HP15_277 0.38 +0.9 269,038 - HP15_277 0.42 -0.3 269,097 - HP15_277 0.46 -0.5 269,098 + HP15_277 0.46 -0.4 269,136 + HP15_277 0.48 +1.6 269,310 - HP15_277 0.59 -0.2 269,487 + HP15_277 0.71 +1.2 269,544 + HP15_277 0.74 -0.3 269,564 + HP15_277 0.75 +0.9 269,576 + HP15_277 0.76 -0.5 269,577 - HP15_277 0.76 +0.9 269,590 + HP15_277 0.77 -0.8 269,620 + HP15_277 0.79 +1.8 269,647 + HP15_277 0.81 +1.6 269,647 + HP15_277 0.81 +0.1 269,705 - HP15_277 0.84 +0.5 269,786 + HP15_277 0.90 +0.7 269,938 - -0.6 269,970 - +0.5 270,091 + +1.0 270,098 + HP15_278 0.10 -0.7 270,264 - HP15_278 0.33 +0.6 270,324 + HP15_278 0.41 +1.0 270,342 + HP15_278 0.44 -0.4 270,397 - HP15_278 0.51 -1.1 270,458 + HP15_278 0.60 -0.6 270,520 - HP15_278 0.68 +1.3 270,536 + HP15_278 0.70 +0.7 270,537 + HP15_278 0.70 -0.5 270,770 - +1.2 270,775 - +0.7 270,855 - HP15_279 0.16 +0.7 270,866 + HP15_279 0.18 -0.2 270,876 - HP15_279 0.20 +0.7 270,878 + HP15_279 0.21 -0.0 270,926 + HP15_279 0.30 +0.8 270,934 + HP15_279 0.32 +0.3
Or see this region's nucleotide sequence