Experiment: m.b. 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_135 and HP15_136 are separated by 75 nucleotides HP15_136 and HP15_137 are separated by 57 nucleotides HP15_137 and HP15_138 are separated by 45 nucleotides
HP15_135: HP15_135 - von Willebrand factor, type A-like protein, at 141,139 to 142,911
_135
HP15_136: HP15_136 - conserved hypothetical protein, at 142,987 to 143,280
_136
HP15_137: HP15_137 - hypothetical protein, at 143,338 to 143,526
_137
HP15_138: HP15_138 - protein containing Phage P4 alpha, zinc-binding domain, at 143,572 to 144,687
_138
Position (kb)
142
143
144 Strain fitness (log2 ratio)
-2
-1
0
1 at 141.987 kb on - strand, within HP15_135 at 141.987 kb on - strand, within HP15_135 at 141.987 kb on - strand, within HP15_135 at 141.987 kb on - strand, within HP15_135 at 142.055 kb on + strand, within HP15_135 at 142.055 kb on + strand, within HP15_135 at 142.065 kb on + strand, within HP15_135 at 142.083 kb on - strand, within HP15_135 at 142.089 kb on + strand, within HP15_135 at 142.136 kb on + strand, within HP15_135 at 142.136 kb on + strand, within HP15_135 at 142.180 kb on + strand, within HP15_135 at 142.276 kb on - strand, within HP15_135 at 142.336 kb on + strand, within HP15_135 at 142.398 kb on + strand, within HP15_135 at 142.542 kb on - strand, within HP15_135 at 142.633 kb on + strand, within HP15_135 at 142.638 kb on + strand, within HP15_135 at 142.658 kb on - strand, within HP15_135 at 142.687 kb on - strand, within HP15_135 at 142.806 kb on - strand at 142.845 kb on - strand at 142.847 kb on + strand at 143.020 kb on + strand, within HP15_136 at 143.032 kb on + strand, within HP15_136 at 143.032 kb on + strand, within HP15_136 at 143.212 kb on - strand, within HP15_136 at 143.227 kb on - strand, within HP15_136 at 143.251 kb on + strand at 143.295 kb on + strand at 143.302 kb on + strand at 143.303 kb on - strand at 143.310 kb on + strand at 143.310 kb on - strand at 143.327 kb on + strand at 143.330 kb on - strand at 143.336 kb on + strand at 143.439 kb on + strand, within HP15_137 at 143.520 kb on - strand at 143.562 kb on + strand at 143.564 kb on + strand at 143.569 kb on + strand at 143.577 kb on - strand at 143.593 kb on + strand at 143.593 kb on + strand at 143.601 kb on - strand at 143.601 kb on - strand at 143.658 kb on + strand at 143.677 kb on - strand at 143.688 kb on + strand, within HP15_138 at 143.688 kb on - strand, within HP15_138 at 143.710 kb on - strand, within HP15_138 at 143.747 kb on - strand, within HP15_138 at 143.954 kb on + strand, within HP15_138 at 143.954 kb on + strand, within HP15_138 at 143.967 kb on + strand, within HP15_138 at 143.975 kb on - strand, within HP15_138 at 143.980 kb on - strand, within HP15_138 at 143.990 kb on - strand, within HP15_138 at 143.990 kb on - strand, within HP15_138 at 144.052 kb on + strand, within HP15_138 at 144.067 kb on - strand, within HP15_138
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 37C remove 141,987 - HP15_135 0.48 -0.3 141,987 - HP15_135 0.48 -0.2 141,987 - HP15_135 0.48 +0.7 141,987 - HP15_135 0.48 +1.4 142,055 + HP15_135 0.52 -0.8 142,055 + HP15_135 0.52 -0.6 142,065 + HP15_135 0.52 +0.9 142,083 - HP15_135 0.53 -0.3 142,089 + HP15_135 0.54 -0.4 142,136 + HP15_135 0.56 +0.2 142,136 + HP15_135 0.56 -0.1 142,180 + HP15_135 0.59 -0.1 142,276 - HP15_135 0.64 +1.1 142,336 + HP15_135 0.68 +1.1 142,398 + HP15_135 0.71 -0.9 142,542 - HP15_135 0.79 +1.0 142,633 + HP15_135 0.84 -1.8 142,638 + HP15_135 0.85 -0.6 142,658 - HP15_135 0.86 +0.8 142,687 - HP15_135 0.87 -0.7 142,806 - +1.1 142,845 - -0.7 142,847 + +0.6 143,020 + HP15_136 0.11 -0.2 143,032 + HP15_136 0.15 -0.7 143,032 + HP15_136 0.15 -1.0 143,212 - HP15_136 0.77 -0.3 143,227 - HP15_136 0.82 -0.7 143,251 + -0.4 143,295 + +0.1 143,302 + -0.7 143,303 - -0.7 143,310 + +1.3 143,310 - -0.3 143,327 + -0.1 143,330 - -0.8 143,336 + -0.2 143,439 + HP15_137 0.53 +0.2 143,520 - +0.6 143,562 + -0.6 143,564 + +0.4 143,569 + +0.8 143,577 - -0.4 143,593 + +0.9 143,593 + -0.1 143,601 - +0.0 143,601 - +0.5 143,658 + -0.7 143,677 - +0.9 143,688 + HP15_138 0.10 -0.1 143,688 - HP15_138 0.10 -1.1 143,710 - HP15_138 0.12 +0.0 143,747 - HP15_138 0.16 -0.1 143,954 + HP15_138 0.34 -0.3 143,954 + HP15_138 0.34 +1.0 143,967 + HP15_138 0.35 +0.6 143,975 - HP15_138 0.36 -0.7 143,980 - HP15_138 0.37 +0.1 143,990 - HP15_138 0.37 +0.7 143,990 - HP15_138 0.37 -0.4 144,052 + HP15_138 0.43 -0.4 144,067 - HP15_138 0.44 -0.4
Or see this region's nucleotide sequence