Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_898 and HP15_899 are separated by 73 nucleotides HP15_899 and HP15_900 are separated by 12 nucleotides HP15_900 and HP15_901 are separated by 66 nucleotides HP15_901 and HP15_902 are separated by 209 nucleotides
HP15_898: HP15_898 - glutamine amidotransferase class-I, at 911,969 to 912,679
_898
HP15_899: HP15_899 - protein YeeN, at 912,753 to 913,478
_899
HP15_900: HP15_900 - hypothetical protein, at 913,491 to 913,652
_900
HP15_901: HP15_901 - TPR repeat, SEL1 subfamily protein-like protein, at 913,719 to 914,300
_901
HP15_902: HP15_902 - hypothetical protein, at 914,510 to 914,926
_902
Position (kb) 913
914 Strain fitness (log2 ratio) -1
0
1 at 912.496 kb on + strand, within HP15_898 at 912.598 kb on + strand, within HP15_898 at 913.088 kb on - strand, within HP15_899 at 913.102 kb on + strand, within HP15_899 at 913.161 kb on + strand, within HP15_899 at 913.223 kb on - strand, within HP15_899 at 913.261 kb on + strand, within HP15_899 at 913.269 kb on - strand, within HP15_899 at 913.312 kb on + strand, within HP15_899 at 913.348 kb on - strand, within HP15_899 at 913.350 kb on + strand, within HP15_899 at 913.406 kb on - strand at 913.416 kb on - strand at 913.558 kb on + strand, within HP15_900 at 913.627 kb on - strand, within HP15_900 at 913.660 kb on + strand at 913.815 kb on - strand, within HP15_901 at 913.900 kb on - strand, within HP15_901 at 913.933 kb on + strand, within HP15_901 at 913.933 kb on + strand, within HP15_901 at 914.053 kb on - strand, within HP15_901 at 914.215 kb on + strand, within HP15_901 at 914.241 kb on + strand, within HP15_901 at 914.383 kb on + strand at 914.407 kb on - strand at 914.419 kb on - strand at 914.424 kb on - strand at 914.533 kb on - strand at 914.549 kb on + strand at 914.562 kb on - strand, within HP15_902 at 914.571 kb on + strand, within HP15_902 at 914.592 kb on + strand, within HP15_902
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 912,496 + HP15_898 0.74 +1.1 912,598 + HP15_898 0.88 +0.2 913,088 - HP15_899 0.46 -0.5 913,102 + HP15_899 0.48 -0.2 913,161 + HP15_899 0.56 +0.3 913,223 - HP15_899 0.65 -0.4 913,261 + HP15_899 0.70 +0.4 913,269 - HP15_899 0.71 -0.0 913,312 + HP15_899 0.77 +0.0 913,348 - HP15_899 0.82 +0.2 913,350 + HP15_899 0.82 +0.1 913,406 - -1.0 913,416 - -0.7 913,558 + HP15_900 0.41 -0.2 913,627 - HP15_900 0.84 -1.2 913,660 + -0.5 913,815 - HP15_901 0.16 +0.0 913,900 - HP15_901 0.31 +0.6 913,933 + HP15_901 0.37 +0.9 913,933 + HP15_901 0.37 -0.2 914,053 - HP15_901 0.57 +1.3 914,215 + HP15_901 0.85 -0.8 914,241 + HP15_901 0.90 +0.0 914,383 + +0.2 914,407 - -0.6 914,419 - -0.1 914,424 - -0.3 914,533 - -0.1 914,549 + +0.5 914,562 - HP15_902 0.12 -0.0 914,571 + HP15_902 0.15 +0.6 914,592 + HP15_902 0.20 +0.4
Or see this region's nucleotide sequence