Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_784 and HP15_785 overlap by 1 nucleotides HP15_785 and HP15_786 are separated by 7 nucleotides HP15_786 and HP15_787 overlap by 11 nucleotides HP15_787 and HP15_788 are separated by 12 nucleotides
HP15_784: HP15_784 - ribonuclease 3, at 795,909 to 796,598
_784
HP15_785: HP15_785 - GTP-binding protein Era-like protein, at 796,598 to 797,515
_785
HP15_786: HP15_786 - DNA repair protein RecO, at 797,523 to 798,251
_786
HP15_787: HP15_787 - pyridoxal phosphate biosynthetic protein PdxJ, at 798,241 to 798,981
_787
HP15_788: HP15_788 - multi-sensor hybrid histidine kinase, at 798,994 to 801,867
_788
Position (kb) 797
798
799 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 797.520 kb on + strand at 797.528 kb on - strand at 797.538 kb on - strand at 797.548 kb on - strand at 797.662 kb on + strand, within HP15_786 at 797.723 kb on - strand, within HP15_786 at 797.736 kb on - strand, within HP15_786 at 797.870 kb on + strand, within HP15_786 at 798.203 kb on - strand at 798.994 kb on - strand at 798.999 kb on - strand at 798.999 kb on - strand at 798.999 kb on - strand at 799.063 kb on - strand at 799.063 kb on - strand at 799.079 kb on + strand at 799.079 kb on + strand at 799.087 kb on - strand at 799.092 kb on + strand at 799.134 kb on - strand at 799.167 kb on - strand at 799.219 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 797,520 + +0.7 797,528 - -0.4 797,538 - -2.9 797,548 - +0.1 797,662 + HP15_786 0.19 -0.5 797,723 - HP15_786 0.27 -1.5 797,736 - HP15_786 0.29 -1.0 797,870 + HP15_786 0.48 -0.7 798,203 - -1.6 798,994 - +1.2 798,999 - -0.1 798,999 - -0.8 798,999 - +0.2 799,063 - +0.2 799,063 - +0.8 799,079 + +1.0 799,079 + +1.1 799,087 - +1.6 799,092 + +2.8 799,134 - +1.2 799,167 - +1.1 799,219 - +1.7
Or see this region's nucleotide sequence