Strain Fitness in Marinobacter adhaerens HP15 around HP15_75

Experiment: m.b. 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_73 and HP15_74 are separated by 278 nucleotidesHP15_74 and HP15_75 overlap by 4 nucleotidesHP15_75 and HP15_76 overlap by 4 nucleotides HP15_73: HP15_73 - hypothetical protein, at 80,892 to 81,146 _73 HP15_74: HP15_74 - hypothetical protein, at 81,425 to 81,820 _74 HP15_75: HP15_75 - conserved hypothetical protein, at 81,817 to 84,126 _75 HP15_76: HP15_76 - phage integrase family protein-like protein, at 84,123 to 87,473 _76 Position (kb) 81 82 83 84 85Strain fitness (log2 ratio) -2 -1 0 1at 80.912 kb on - strandat 80.921 kb on - strand, within HP15_73at 80.921 kb on - strand, within HP15_73at 80.935 kb on + strand, within HP15_73at 80.945 kb on + strand, within HP15_73at 80.965 kb on + strand, within HP15_73at 80.973 kb on - strand, within HP15_73at 80.973 kb on - strand, within HP15_73at 81.050 kb on + strand, within HP15_73at 81.135 kb on + strandat 81.143 kb on - strandat 81.195 kb on + strandat 81.202 kb on - strandat 81.292 kb on + strandat 81.293 kb on - strandat 81.345 kb on + strandat 81.423 kb on + strandat 81.463 kb on + strandat 81.463 kb on + strandat 81.470 kb on + strand, within HP15_74at 81.497 kb on - strand, within HP15_74at 81.507 kb on - strand, within HP15_74at 81.513 kb on + strand, within HP15_74at 81.534 kb on + strand, within HP15_74at 81.559 kb on - strand, within HP15_74at 81.559 kb on - strand, within HP15_74at 81.579 kb on + strand, within HP15_74at 81.611 kb on - strand, within HP15_74at 81.759 kb on - strand, within HP15_74at 81.777 kb on - strand, within HP15_74at 81.851 kb on - strandat 81.864 kb on + strandat 81.951 kb on - strandat 81.959 kb on - strandat 82.024 kb on + strandat 82.113 kb on + strand, within HP15_75at 82.158 kb on + strand, within HP15_75at 82.169 kb on + strand, within HP15_75at 82.206 kb on - strand, within HP15_75at 82.309 kb on - strand, within HP15_75at 82.309 kb on - strand, within HP15_75at 82.316 kb on + strand, within HP15_75at 82.345 kb on + strand, within HP15_75at 82.406 kb on + strand, within HP15_75at 82.527 kb on - strand, within HP15_75at 82.545 kb on - strand, within HP15_75at 82.566 kb on + strand, within HP15_75at 82.568 kb on - strand, within HP15_75at 82.574 kb on - strand, within HP15_75at 82.702 kb on + strand, within HP15_75at 82.702 kb on + strand, within HP15_75at 82.710 kb on - strand, within HP15_75at 82.710 kb on - strand, within HP15_75at 82.782 kb on - strand, within HP15_75at 82.782 kb on - strand, within HP15_75at 82.851 kb on + strand, within HP15_75at 82.858 kb on - strand, within HP15_75at 82.905 kb on + strand, within HP15_75at 82.912 kb on - strand, within HP15_75at 82.912 kb on - strand, within HP15_75at 82.912 kb on - strand, within HP15_75at 82.943 kb on - strand, within HP15_75at 83.014 kb on - strand, within HP15_75at 83.058 kb on + strand, within HP15_75at 83.086 kb on - strand, within HP15_75at 83.107 kb on - strand, within HP15_75at 83.429 kb on + strand, within HP15_75at 83.475 kb on - strand, within HP15_75at 83.597 kb on - strand, within HP15_75at 83.607 kb on - strand, within HP15_75at 83.660 kb on - strand, within HP15_75at 83.687 kb on - strand, within HP15_75at 83.701 kb on + strand, within HP15_75at 83.710 kb on + strand, within HP15_75at 83.718 kb on - strand, within HP15_75at 83.720 kb on + strand, within HP15_75at 83.726 kb on - strand, within HP15_75at 83.728 kb on - strand, within HP15_75at 83.728 kb on - strand, within HP15_75at 83.795 kb on + strand, within HP15_75at 83.795 kb on + strand, within HP15_75at 83.803 kb on - strand, within HP15_75at 83.812 kb on - strand, within HP15_75at 83.889 kb on + strand, within HP15_75at 83.897 kb on - strandat 83.912 kb on - strandat 83.925 kb on + strandat 83.926 kb on - strandat 84.007 kb on - strandat 84.026 kb on - strandat 84.054 kb on + strandat 84.073 kb on - strandat 84.075 kb on - strandat 84.147 kb on + strandat 84.147 kb on + strandat 84.168 kb on + strandat 84.289 kb on + strandat 84.299 kb on + strandat 84.304 kb on + strandat 84.307 kb on - strandat 84.312 kb on - strandat 84.312 kb on - strandat 84.314 kb on + strandat 84.326 kb on + strandat 84.394 kb on + strandat 84.409 kb on - strandat 84.411 kb on + strandat 84.453 kb on + strandat 84.535 kb on - strand, within HP15_76at 84.535 kb on - strand, within HP15_76at 84.546 kb on + strand, within HP15_76at 84.546 kb on + strand, within HP15_76at 84.546 kb on + strand, within HP15_76at 84.546 kb on + strand, within HP15_76at 84.548 kb on + strand, within HP15_76at 84.548 kb on + strand, within HP15_76at 84.549 kb on - strand, within HP15_76at 84.587 kb on - strand, within HP15_76at 84.607 kb on + strand, within HP15_76at 84.675 kb on - strand, within HP15_76at 84.736 kb on + strand, within HP15_76at 84.930 kb on + strand, within HP15_76at 84.973 kb on - strand, within HP15_76at 84.986 kb on + strand, within HP15_76at 84.994 kb on - strand, within HP15_76at 85.110 kb on + strand, within HP15_76

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 30C
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80,912 - -0.5
80,921 - HP15_73 0.11 -0.6
80,921 - HP15_73 0.11 +0.7
80,935 + HP15_73 0.17 +1.5
80,945 + HP15_73 0.21 +1.3
80,965 + HP15_73 0.29 +0.9
80,973 - HP15_73 0.32 -0.2
80,973 - HP15_73 0.32 +1.1
81,050 + HP15_73 0.62 +0.0
81,135 + +0.1
81,143 - -0.1
81,195 + -0.3
81,202 - -0.7
81,292 + -0.1
81,293 - +0.7
81,345 + +0.8
81,423 + +0.4
81,463 + -0.5
81,463 + -0.3
81,470 + HP15_74 0.11 -0.1
81,497 - HP15_74 0.18 -0.2
81,507 - HP15_74 0.21 +0.8
81,513 + HP15_74 0.22 +0.0
81,534 + HP15_74 0.28 -0.5
81,559 - HP15_74 0.34 +0.7
81,559 - HP15_74 0.34 +0.1
81,579 + HP15_74 0.39 +0.3
81,611 - HP15_74 0.47 +0.1
81,759 - HP15_74 0.84 +0.2
81,777 - HP15_74 0.89 +0.7
81,851 - +0.3
81,864 + +0.3
81,951 - -0.6
81,959 - -0.3
82,024 + -0.1
82,113 + HP15_75 0.13 -1.1
82,158 + HP15_75 0.15 +0.5
82,169 + HP15_75 0.15 -0.0
82,206 - HP15_75 0.17 +0.0
82,309 - HP15_75 0.21 -0.2
82,309 - HP15_75 0.21 +0.2
82,316 + HP15_75 0.22 -0.8
82,345 + HP15_75 0.23 -0.4
82,406 + HP15_75 0.25 -0.2
82,527 - HP15_75 0.31 -0.5
82,545 - HP15_75 0.32 -0.5
82,566 + HP15_75 0.32 -0.8
82,568 - HP15_75 0.33 -0.3
82,574 - HP15_75 0.33 +0.4
82,702 + HP15_75 0.38 +0.1
82,702 + HP15_75 0.38 -1.9
82,710 - HP15_75 0.39 -0.7
82,710 - HP15_75 0.39 -0.9
82,782 - HP15_75 0.42 +0.5
82,782 - HP15_75 0.42 -0.5
82,851 + HP15_75 0.45 -0.3
82,858 - HP15_75 0.45 +0.7
82,905 + HP15_75 0.47 -0.3
82,912 - HP15_75 0.47 -0.4
82,912 - HP15_75 0.47 +0.3
82,912 - HP15_75 0.47 -0.3
82,943 - HP15_75 0.49 +0.4
83,014 - HP15_75 0.52 +0.5
83,058 + HP15_75 0.54 -1.2
83,086 - HP15_75 0.55 -0.3
83,107 - HP15_75 0.56 +0.6
83,429 + HP15_75 0.70 +0.6
83,475 - HP15_75 0.72 -0.5
83,597 - HP15_75 0.77 -0.2
83,607 - HP15_75 0.77 -0.0
83,660 - HP15_75 0.80 -0.7
83,687 - HP15_75 0.81 -0.4
83,701 + HP15_75 0.82 -1.5
83,710 + HP15_75 0.82 -0.0
83,718 - HP15_75 0.82 -0.9
83,720 + HP15_75 0.82 -0.5
83,726 - HP15_75 0.83 -0.1
83,728 - HP15_75 0.83 -0.1
83,728 - HP15_75 0.83 +0.2
83,795 + HP15_75 0.86 -0.3
83,795 + HP15_75 0.86 -0.1
83,803 - HP15_75 0.86 -0.7
83,812 - HP15_75 0.86 +0.1
83,889 + HP15_75 0.90 +0.0
83,897 - +0.8
83,912 - -0.7
83,925 + +0.0
83,926 - +0.3
84,007 - -0.5
84,026 - -0.9
84,054 + -0.0
84,073 - -0.0
84,075 - -0.6
84,147 + +0.3
84,147 + -0.6
84,168 + -0.0
84,289 + +0.9
84,299 + +0.4
84,304 + +0.7
84,307 - +0.7
84,312 - -1.2
84,312 - +0.9
84,314 + +0.0
84,326 + +0.4
84,394 + -0.1
84,409 - -0.0
84,411 + +0.6
84,453 + -0.9
84,535 - HP15_76 0.12 -0.2
84,535 - HP15_76 0.12 +0.9
84,546 + HP15_76 0.13 -0.7
84,546 + HP15_76 0.13 +0.3
84,546 + HP15_76 0.13 -0.8
84,546 + HP15_76 0.13 -0.7
84,548 + HP15_76 0.13 -0.7
84,548 + HP15_76 0.13 +0.1
84,549 - HP15_76 0.13 -0.2
84,587 - HP15_76 0.14 +0.6
84,607 + HP15_76 0.14 -0.3
84,675 - HP15_76 0.16 -1.7
84,736 + HP15_76 0.18 -0.2
84,930 + HP15_76 0.24 -1.0
84,973 - HP15_76 0.25 +0.3
84,986 + HP15_76 0.26 -0.2
84,994 - HP15_76 0.26 -1.4
85,110 + HP15_76 0.29 -0.3

Or see this region's nucleotide sequence