Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_632 and HP15_633 are separated by 24 nucleotides HP15_633 and HP15_634 are separated by 27 nucleotides HP15_634 and HP15_635 are separated by 139 nucleotides
HP15_632: HP15_632 - hypothetical protein, at 654,774 to 654,893
_632
HP15_633: HP15_633 - dTDP-4-dehydrorhamnose reductase-like protein, at 654,918 to 655,751
_633
HP15_634: HP15_634 - transcriptional regulator, Crp/Fnr family, at 655,779 to 656,528
_634
HP15_635: HP15_635 - 3-oxoacyl-(acyl carrier protein) synthase I, at 656,668 to 657,852
_635
Position (kb) 655
656
657 Strain fitness (log2 ratio) -2
-1
0
1 at 654.929 kb on + strand at 655.046 kb on + strand, within HP15_633 at 655.344 kb on + strand, within HP15_633 at 655.344 kb on + strand, within HP15_633 at 655.610 kb on + strand, within HP15_633 at 655.959 kb on - strand, within HP15_634 at 656.069 kb on + strand, within HP15_634 at 656.240 kb on - strand, within HP15_634 at 656.271 kb on + strand, within HP15_634 at 656.399 kb on + strand, within HP15_634 at 656.658 kb on - strand at 656.658 kb on - strand at 656.658 kb on - strand at 656.868 kb on - strand, within HP15_635 at 656.870 kb on - strand, within HP15_635 at 657.011 kb on + strand, within HP15_635 at 657.019 kb on - strand, within HP15_635 at 657.039 kb on + strand, within HP15_635 at 657.039 kb on + strand, within HP15_635 at 657.047 kb on - strand, within HP15_635 at 657.052 kb on - strand, within HP15_635 at 657.089 kb on - strand, within HP15_635 at 657.089 kb on - strand, within HP15_635 at 657.345 kb on - strand, within HP15_635 at 657.350 kb on + strand, within HP15_635 at 657.454 kb on + strand, within HP15_635 at 657.513 kb on - strand, within HP15_635 at 657.513 kb on - strand, within HP15_635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 654,929 + +0.4 655,046 + HP15_633 0.15 +0.7 655,344 + HP15_633 0.51 +0.9 655,344 + HP15_633 0.51 +1.2 655,610 + HP15_633 0.83 +0.4 655,959 - HP15_634 0.24 -0.6 656,069 + HP15_634 0.39 -0.1 656,240 - HP15_634 0.61 -0.4 656,271 + HP15_634 0.66 -0.6 656,399 + HP15_634 0.83 -0.7 656,658 - -0.6 656,658 - +0.1 656,658 - +0.9 656,868 - HP15_635 0.17 -0.8 656,870 - HP15_635 0.17 +0.1 657,011 + HP15_635 0.29 -1.3 657,019 - HP15_635 0.30 -0.2 657,039 + HP15_635 0.31 -0.7 657,039 + HP15_635 0.31 -1.9 657,047 - HP15_635 0.32 +0.6 657,052 - HP15_635 0.32 +0.5 657,089 - HP15_635 0.36 +0.6 657,089 - HP15_635 0.36 +0.3 657,345 - HP15_635 0.57 -0.4 657,350 + HP15_635 0.58 -1.8 657,454 + HP15_635 0.66 +0.5 657,513 - HP15_635 0.71 +0.1 657,513 - HP15_635 0.71 +0.2
Or see this region's nucleotide sequence