Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_431 and HP15_432 are separated by 488 nucleotides HP15_432 and HP15_433 are separated by 93 nucleotides HP15_433 and HP15_434 are separated by 27 nucleotides
HP15_431: HP15_431 - D-tyrosyl-tRNA(Tyr) deacylase, at 431,148 to 431,606
_431
HP15_432: HP15_432 - outer membrane protein (porin), at 432,095 to 433,102
_432
HP15_433: HP15_433 - adenylate cyclase, at 433,196 to 434,059
_433
HP15_434: HP15_434 - potassium channel protein, at 434,087 to 435,268
_434
Position (kb) 432
433
434 Strain fitness (log2 ratio) -2
-1
0
1 at 431.108 kb on + strand at 431.108 kb on + strand at 431.124 kb on + strand at 431.234 kb on - strand, within HP15_431 at 431.406 kb on + strand, within HP15_431 at 431.414 kb on - strand, within HP15_431 at 431.489 kb on + strand, within HP15_431 at 431.507 kb on - strand, within HP15_431 at 431.537 kb on + strand, within HP15_431 at 431.543 kb on + strand, within HP15_431 at 431.550 kb on - strand, within HP15_431 at 431.565 kb on + strand at 431.659 kb on + strand at 431.659 kb on + strand at 431.728 kb on - strand at 431.775 kb on - strand at 431.783 kb on - strand at 431.914 kb on - strand at 432.002 kb on - strand at 432.005 kb on + strand at 432.009 kb on + strand at 432.212 kb on + strand, within HP15_432 at 432.220 kb on - strand, within HP15_432 at 432.291 kb on + strand, within HP15_432 at 432.292 kb on - strand, within HP15_432 at 432.630 kb on - strand, within HP15_432 at 432.702 kb on + strand, within HP15_432 at 432.866 kb on + strand, within HP15_432 at 432.906 kb on - strand, within HP15_432 at 433.236 kb on + strand at 433.261 kb on - strand at 433.261 kb on - strand at 433.288 kb on + strand, within HP15_433 at 433.348 kb on + strand, within HP15_433 at 433.348 kb on + strand, within HP15_433 at 433.348 kb on + strand, within HP15_433 at 433.361 kb on - strand, within HP15_433 at 433.406 kb on - strand, within HP15_433 at 433.445 kb on + strand, within HP15_433 at 433.649 kb on + strand, within HP15_433 at 433.689 kb on + strand, within HP15_433 at 433.689 kb on + strand, within HP15_433 at 433.689 kb on + strand, within HP15_433 at 433.689 kb on + strand, within HP15_433 at 433.697 kb on - strand, within HP15_433 at 433.697 kb on - strand, within HP15_433 at 433.697 kb on - strand, within HP15_433 at 433.697 kb on - strand, within HP15_433 at 433.758 kb on + strand, within HP15_433 at 433.784 kb on + strand, within HP15_433 at 433.792 kb on - strand, within HP15_433 at 433.812 kb on - strand, within HP15_433 at 434.001 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 431,108 + -1.1 431,108 + +1.1 431,124 + -0.2 431,234 - HP15_431 0.19 -0.1 431,406 + HP15_431 0.56 +0.3 431,414 - HP15_431 0.58 -0.1 431,489 + HP15_431 0.74 +0.4 431,507 - HP15_431 0.78 -0.0 431,537 + HP15_431 0.85 -0.0 431,543 + HP15_431 0.86 +0.2 431,550 - HP15_431 0.88 +1.5 431,565 + -0.2 431,659 + -0.1 431,659 + -0.5 431,728 - -0.4 431,775 - -0.8 431,783 - -0.2 431,914 - +0.2 432,002 - +0.3 432,005 + -0.2 432,009 + -0.2 432,212 + HP15_432 0.12 +1.4 432,220 - HP15_432 0.12 -0.8 432,291 + HP15_432 0.19 -1.7 432,292 - HP15_432 0.20 +0.2 432,630 - HP15_432 0.53 -0.3 432,702 + HP15_432 0.60 -1.1 432,866 + HP15_432 0.76 +0.3 432,906 - HP15_432 0.80 -1.9 433,236 + +0.5 433,261 - -0.3 433,261 - +1.1 433,288 + HP15_433 0.11 +0.8 433,348 + HP15_433 0.18 -0.3 433,348 + HP15_433 0.18 +0.5 433,348 + HP15_433 0.18 +0.5 433,361 - HP15_433 0.19 +0.2 433,406 - HP15_433 0.24 -0.0 433,445 + HP15_433 0.29 +0.4 433,649 + HP15_433 0.52 +0.3 433,689 + HP15_433 0.57 +0.0 433,689 + HP15_433 0.57 +0.1 433,689 + HP15_433 0.57 +0.4 433,689 + HP15_433 0.57 -0.5 433,697 - HP15_433 0.58 +0.1 433,697 - HP15_433 0.58 -0.3 433,697 - HP15_433 0.58 -0.4 433,697 - HP15_433 0.58 +0.6 433,758 + HP15_433 0.65 +1.1 433,784 + HP15_433 0.68 -0.1 433,792 - HP15_433 0.69 -0.3 433,812 - HP15_433 0.71 +0.0 434,001 + +0.2
Or see this region's nucleotide sequence