Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3513 and HP15_3514 are separated by 32 nucleotides HP15_3514 and HP15_3515 are separated by 20 nucleotides HP15_3515 and HP15_3516 are separated by 118 nucleotides
HP15_3513: HP15_3513 - response regulator receiver domain protein (CheY), at 3,696,075 to 3,696,467
_3513
HP15_3514: HP15_3514 - response regulator receiver domain protein (CheY), at 3,696,500 to 3,696,862
_3514
HP15_3515: HP15_3515 - chemotaxis signal transduction protein, at 3,696,883 to 3,697,428
_3515
HP15_3516: HP15_3516 - methyl-accepting chemotaxis sensory transducer, at 3,697,547 to 3,699,595
_3516
Position (kb)
3696
3697
3698 Strain fitness (log2 ratio)
-2
-1
0
1 at 3695.887 kb on - strand at 3695.887 kb on - strand at 3695.933 kb on - strand at 3695.987 kb on - strand at 3696.006 kb on + strand at 3696.006 kb on + strand at 3696.006 kb on + strand at 3696.006 kb on + strand at 3696.014 kb on - strand at 3696.014 kb on - strand at 3696.014 kb on - strand at 3696.065 kb on - strand at 3696.067 kb on + strand at 3696.166 kb on + strand, within HP15_3513 at 3696.201 kb on - strand, within HP15_3513 at 3696.260 kb on - strand, within HP15_3513 at 3696.281 kb on - strand, within HP15_3513 at 3696.296 kb on - strand, within HP15_3513 at 3696.349 kb on + strand, within HP15_3513 at 3696.370 kb on + strand, within HP15_3513 at 3696.387 kb on + strand, within HP15_3513 at 3696.392 kb on + strand, within HP15_3513 at 3696.393 kb on + strand, within HP15_3513 at 3696.425 kb on + strand, within HP15_3513 at 3696.425 kb on + strand, within HP15_3513 at 3696.425 kb on + strand, within HP15_3513 at 3696.425 kb on + strand, within HP15_3513 at 3696.433 kb on - strand at 3696.433 kb on - strand at 3696.433 kb on - strand at 3696.433 kb on - strand at 3696.568 kb on + strand, within HP15_3514 at 3696.590 kb on + strand, within HP15_3514 at 3696.590 kb on + strand, within HP15_3514 at 3696.678 kb on + strand, within HP15_3514 at 3696.678 kb on + strand, within HP15_3514 at 3696.708 kb on - strand, within HP15_3514 at 3696.974 kb on + strand, within HP15_3515 at 3696.982 kb on - strand, within HP15_3515 at 3697.085 kb on + strand, within HP15_3515 at 3697.087 kb on - strand, within HP15_3515 at 3697.379 kb on - strand at 3697.389 kb on + strand at 3697.422 kb on + strand at 3697.422 kb on + strand at 3697.438 kb on - strand at 3697.472 kb on - strand at 3697.553 kb on - strand at 3697.553 kb on - strand at 3697.625 kb on - strand at 3697.645 kb on + strand at 3697.655 kb on + strand at 3697.683 kb on + strand at 3697.722 kb on - strand at 3697.752 kb on + strand, within HP15_3516 at 3697.797 kb on - strand, within HP15_3516 at 3697.855 kb on - strand, within HP15_3516 at 3697.881 kb on - strand, within HP15_3516 at 3697.940 kb on - strand, within HP15_3516 at 3697.940 kb on - strand, within HP15_3516 at 3698.043 kb on + strand, within HP15_3516 at 3698.046 kb on - strand, within HP15_3516 at 3698.046 kb on - strand, within HP15_3516 at 3698.159 kb on - strand, within HP15_3516 at 3698.185 kb on + strand, within HP15_3516 at 3698.218 kb on + strand, within HP15_3516 at 3698.307 kb on - strand, within HP15_3516 at 3698.418 kb on + strand, within HP15_3516
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 3,695,887 - -0.6 3,695,887 - -0.0 3,695,933 - +0.6 3,695,987 - +0.1 3,696,006 + +0.3 3,696,006 + -0.1 3,696,006 + +0.2 3,696,006 + -0.5 3,696,014 - -0.0 3,696,014 - -0.4 3,696,014 - +0.3 3,696,065 - +0.3 3,696,067 + +0.3 3,696,166 + HP15_3513 0.23 +0.7 3,696,201 - HP15_3513 0.32 +0.1 3,696,260 - HP15_3513 0.47 -0.2 3,696,281 - HP15_3513 0.52 -0.2 3,696,296 - HP15_3513 0.56 +0.1 3,696,349 + HP15_3513 0.70 +0.5 3,696,370 + HP15_3513 0.75 +0.3 3,696,387 + HP15_3513 0.79 -0.2 3,696,392 + HP15_3513 0.81 -1.5 3,696,393 + HP15_3513 0.81 -0.7 3,696,425 + HP15_3513 0.89 +0.1 3,696,425 + HP15_3513 0.89 -0.5 3,696,425 + HP15_3513 0.89 +1.1 3,696,425 + HP15_3513 0.89 +0.6 3,696,433 - +0.8 3,696,433 - +0.8 3,696,433 - -0.5 3,696,433 - +0.3 3,696,568 + HP15_3514 0.19 -0.1 3,696,590 + HP15_3514 0.25 +0.4 3,696,590 + HP15_3514 0.25 +0.0 3,696,678 + HP15_3514 0.49 +0.1 3,696,678 + HP15_3514 0.49 -0.1 3,696,708 - HP15_3514 0.57 -2.4 3,696,974 + HP15_3515 0.17 -0.5 3,696,982 - HP15_3515 0.18 +0.0 3,697,085 + HP15_3515 0.37 -0.1 3,697,087 - HP15_3515 0.37 +0.0 3,697,379 - -0.5 3,697,389 + -0.3 3,697,422 + +1.2 3,697,422 + -0.2 3,697,438 - -0.1 3,697,472 - +0.1 3,697,553 - -0.7 3,697,553 - -0.4 3,697,625 - -1.2 3,697,645 + +0.2 3,697,655 + -0.6 3,697,683 + +0.4 3,697,722 - +0.1 3,697,752 + HP15_3516 0.10 -0.9 3,697,797 - HP15_3516 0.12 +0.3 3,697,855 - HP15_3516 0.15 -0.5 3,697,881 - HP15_3516 0.16 -0.5 3,697,940 - HP15_3516 0.19 +0.8 3,697,940 - HP15_3516 0.19 -0.3 3,698,043 + HP15_3516 0.24 +1.4 3,698,046 - HP15_3516 0.24 -0.2 3,698,046 - HP15_3516 0.24 -1.1 3,698,159 - HP15_3516 0.30 -0.2 3,698,185 + HP15_3516 0.31 +0.1 3,698,218 + HP15_3516 0.33 +0.7 3,698,307 - HP15_3516 0.37 -0.5 3,698,418 + HP15_3516 0.43 -1.5
Or see this region's nucleotide sequence