Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3508 and HP15_3509 are separated by 7 nucleotides HP15_3509 and HP15_3510 are separated by 19 nucleotides HP15_3510 and HP15_3511 are separated by 26 nucleotides HP15_3511 and HP15_3512 are separated by 48 nucleotides
HP15_3508: HP15_3508 - bifunctional protein PyrR, at 3,692,414 to 3,692,923
_3508
HP15_3509: HP15_3509 - Holliday junction resolvase, at 3,692,931 to 3,693,326
_3509
HP15_3510: HP15_3510 - transcriptional regulator, at 3,693,346 to 3,693,882
_3510
HP15_3511: HP15_3511 - TonB family protein, at 3,693,909 to 3,694,775
_3511
HP15_3512: HP15_3512 - glutathione synthetase, at 3,694,824 to 3,695,777
_3512
Position (kb)
3693
3694
3695 Strain fitness (log2 ratio)
-1
0
1 at 3692.916 kb on + strand at 3693.439 kb on - strand, within HP15_3510 at 3693.595 kb on + strand, within HP15_3510 at 3693.595 kb on - strand, within HP15_3510 at 3693.634 kb on + strand, within HP15_3510 at 3693.662 kb on - strand, within HP15_3510 at 3693.781 kb on + strand, within HP15_3510 at 3693.789 kb on - strand, within HP15_3510 at 3693.789 kb on - strand, within HP15_3510 at 3693.789 kb on - strand, within HP15_3510 at 3693.789 kb on - strand, within HP15_3510 at 3693.940 kb on + strand at 3694.090 kb on - strand, within HP15_3511 at 3694.134 kb on - strand, within HP15_3511 at 3694.200 kb on + strand, within HP15_3511 at 3694.200 kb on + strand, within HP15_3511 at 3694.210 kb on + strand, within HP15_3511 at 3694.627 kb on + strand, within HP15_3511 at 3694.655 kb on + strand, within HP15_3511 at 3694.687 kb on - strand, within HP15_3511 at 3694.715 kb on - strand at 3694.822 kb on + strand at 3694.894 kb on - strand at 3695.036 kb on + strand, within HP15_3512 at 3695.036 kb on + strand, within HP15_3512 at 3695.044 kb on - strand, within HP15_3512 at 3695.163 kb on + strand, within HP15_3512 at 3695.431 kb on + strand, within HP15_3512 at 3695.449 kb on - strand, within HP15_3512 at 3695.471 kb on + strand, within HP15_3512 at 3695.561 kb on - strand, within HP15_3512 at 3695.564 kb on + strand, within HP15_3512 at 3695.572 kb on - strand, within HP15_3512 at 3695.572 kb on - strand, within HP15_3512 at 3695.614 kb on - strand, within HP15_3512 at 3695.614 kb on - strand, within HP15_3512 at 3695.685 kb on + strand at 3695.693 kb on - strand at 3695.703 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 3,692,916 + -0.1 3,693,439 - HP15_3510 0.17 +0.6 3,693,595 + HP15_3510 0.46 -1.5 3,693,595 - HP15_3510 0.46 +0.3 3,693,634 + HP15_3510 0.54 -1.5 3,693,662 - HP15_3510 0.59 -0.7 3,693,781 + HP15_3510 0.81 -1.2 3,693,789 - HP15_3510 0.82 -0.3 3,693,789 - HP15_3510 0.82 +0.8 3,693,789 - HP15_3510 0.82 +0.1 3,693,789 - HP15_3510 0.82 -0.1 3,693,940 + -0.2 3,694,090 - HP15_3511 0.21 -0.7 3,694,134 - HP15_3511 0.26 +0.5 3,694,200 + HP15_3511 0.34 +0.1 3,694,200 + HP15_3511 0.34 -1.1 3,694,210 + HP15_3511 0.35 -1.6 3,694,627 + HP15_3511 0.83 +0.3 3,694,655 + HP15_3511 0.86 -1.5 3,694,687 - HP15_3511 0.90 -0.7 3,694,715 - +0.1 3,694,822 + -0.9 3,694,894 - -0.1 3,695,036 + HP15_3512 0.22 -0.3 3,695,036 + HP15_3512 0.22 -1.7 3,695,044 - HP15_3512 0.23 -0.9 3,695,163 + HP15_3512 0.36 -0.6 3,695,431 + HP15_3512 0.64 -0.7 3,695,449 - HP15_3512 0.66 -0.3 3,695,471 + HP15_3512 0.68 +0.5 3,695,561 - HP15_3512 0.77 -0.4 3,695,564 + HP15_3512 0.78 -0.0 3,695,572 - HP15_3512 0.78 +0.0 3,695,572 - HP15_3512 0.78 -0.3 3,695,614 - HP15_3512 0.83 -0.8 3,695,614 - HP15_3512 0.83 +1.5 3,695,685 + -0.4 3,695,693 - -1.4 3,695,703 - -0.3
Or see this region's nucleotide sequence