Strain Fitness in Marinobacter adhaerens HP15 around HP15_3108

Experiment: m.b. 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_3107 and HP15_3108 are separated by 801 nucleotidesHP15_3108 and HP15_3109 are separated by 938 nucleotides HP15_3107: HP15_3107 - hypothetical protein, at 3,257,850 to 3,257,981 _3107 HP15_3108: HP15_3108 - hypothetical protein, at 3,258,783 to 3,259,013 _3108 HP15_3109: HP15_3109 - hypothetical protein, at 3,259,952 to 3,260,743 _3109 Position (kb) 3258 3259 3260Strain fitness (log2 ratio) -2 -1 0 1 2 3at 3257.812 kb on - strandat 3257.936 kb on + strand, within HP15_3107at 3258.111 kb on - strandat 3258.135 kb on + strandat 3258.135 kb on + strandat 3258.143 kb on - strandat 3258.259 kb on - strandat 3258.323 kb on - strandat 3258.392 kb on - strandat 3258.425 kb on + strandat 3258.462 kb on - strandat 3258.602 kb on + strandat 3258.612 kb on - strandat 3258.787 kb on + strandat 3258.860 kb on + strand, within HP15_3108at 3259.066 kb on + strandat 3259.066 kb on + strandat 3259.066 kb on + strandat 3259.066 kb on + strandat 3259.074 kb on - strandat 3259.074 kb on - strandat 3259.074 kb on - strandat 3259.130 kb on + strandat 3259.130 kb on + strandat 3259.189 kb on - strandat 3259.213 kb on + strandat 3259.221 kb on - strandat 3259.290 kb on + strandat 3259.383 kb on + strandat 3259.393 kb on - strandat 3259.427 kb on - strandat 3259.461 kb on - strandat 3259.491 kb on - strandat 3259.544 kb on - strandat 3259.616 kb on + strandat 3259.616 kb on - strandat 3259.648 kb on - strandat 3259.689 kb on + strandat 3259.699 kb on + strandat 3259.699 kb on + strandat 3259.763 kb on - strandat 3259.777 kb on + strandat 3259.787 kb on + strandat 3259.787 kb on + strandat 3259.787 kb on + strandat 3259.787 kb on + strandat 3259.795 kb on - strandat 3259.795 kb on - strandat 3259.795 kb on - strandat 3259.936 kb on + strandat 3259.972 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 30C
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3,257,812 - +0.0
3,257,936 + HP15_3107 0.65 -0.7
3,258,111 - +1.1
3,258,135 + -0.2
3,258,135 + +0.6
3,258,143 - -0.4
3,258,259 - +0.1
3,258,323 - +0.4
3,258,392 - +0.9
3,258,425 + +0.5
3,258,462 - +3.5
3,258,602 + +0.1
3,258,612 - +0.5
3,258,787 + -1.9
3,258,860 + HP15_3108 0.33 -0.5
3,259,066 + -0.1
3,259,066 + +0.1
3,259,066 + +0.3
3,259,066 + -0.0
3,259,074 - +0.4
3,259,074 - +0.3
3,259,074 - -0.3
3,259,130 + -0.4
3,259,130 + -1.6
3,259,189 - +0.8
3,259,213 + +1.1
3,259,221 - +0.3
3,259,290 + +1.1
3,259,383 + +0.5
3,259,393 - +2.0
3,259,427 - -0.2
3,259,461 - -0.3
3,259,491 - -1.5
3,259,544 - -0.4
3,259,616 + +0.5
3,259,616 - -0.7
3,259,648 - -0.2
3,259,689 + -0.6
3,259,699 + +0.8
3,259,699 + -0.8
3,259,763 - +0.2
3,259,777 + +0.2
3,259,787 + -0.3
3,259,787 + -0.1
3,259,787 + +0.1
3,259,787 + -0.3
3,259,795 - +0.9
3,259,795 - +0.6
3,259,795 - -0.4
3,259,936 + -0.9
3,259,972 - +0.3

Or see this region's nucleotide sequence