Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2820 and HP15_2821 are separated by 37 nucleotides HP15_2821 and HP15_2822 are separated by 113 nucleotides HP15_2822 and HP15_2823 overlap by 11 nucleotides
HP15_2820: HP15_2820 - phosphate: Na+ symporter, at 2,965,606 to 2,967,414
_2820
HP15_2821: HP15_2821 - hypothetical protein, at 2,967,452 to 2,967,700
_2821
HP15_2822: HP15_2822 - MutT/nudix family protein, at 2,967,814 to 2,968,296
_2822
HP15_2823: HP15_2823 - Zn-dependent hydrolase of the beta-lactamase fold, at 2,968,286 to 2,969,311
_2823
Position (kb)
2967
2968 Strain fitness (log2 ratio)
-1
0
1 at 2966.473 kb on - strand, within HP15_2820 at 2966.612 kb on + strand, within HP15_2820 at 2966.654 kb on + strand, within HP15_2820 at 2966.673 kb on + strand, within HP15_2820 at 2966.703 kb on + strand, within HP15_2820 at 2966.756 kb on + strand, within HP15_2820 at 2966.858 kb on - strand, within HP15_2820 at 2966.885 kb on - strand, within HP15_2820 at 2967.039 kb on + strand, within HP15_2820 at 2967.151 kb on + strand, within HP15_2820 at 2967.330 kb on + strand at 2967.338 kb on - strand at 2967.370 kb on - strand at 2967.375 kb on - strand at 2967.402 kb on + strand at 2967.402 kb on + strand at 2967.418 kb on + strand at 2967.429 kb on + strand at 2967.657 kb on - strand, within HP15_2821 at 2967.673 kb on + strand, within HP15_2821 at 2967.685 kb on + strand at 2967.693 kb on - strand at 2967.693 kb on - strand at 2967.693 kb on - strand at 2967.773 kb on - strand at 2967.845 kb on - strand at 2967.857 kb on - strand at 2968.037 kb on + strand, within HP15_2822 at 2968.045 kb on - strand, within HP15_2822 at 2968.045 kb on - strand, within HP15_2822 at 2968.061 kb on + strand, within HP15_2822 at 2968.091 kb on - strand, within HP15_2822 at 2968.165 kb on + strand, within HP15_2822 at 2968.165 kb on + strand, within HP15_2822 at 2968.165 kb on + strand, within HP15_2822 at 2968.165 kb on + strand, within HP15_2822 at 2968.173 kb on - strand, within HP15_2822 at 2968.173 kb on - strand, within HP15_2822 at 2968.173 kb on - strand, within HP15_2822 at 2968.173 kb on - strand, within HP15_2822 at 2968.501 kb on + strand, within HP15_2823 at 2968.504 kb on - strand, within HP15_2823 at 2968.509 kb on - strand, within HP15_2823 at 2968.511 kb on + strand, within HP15_2823 at 2968.595 kb on - strand, within HP15_2823 at 2968.609 kb on + strand, within HP15_2823 at 2968.610 kb on - strand, within HP15_2823
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 2,966,473 - HP15_2820 0.48 -0.0 2,966,612 + HP15_2820 0.56 -0.2 2,966,654 + HP15_2820 0.58 +0.0 2,966,673 + HP15_2820 0.59 -0.1 2,966,703 + HP15_2820 0.61 +1.0 2,966,756 + HP15_2820 0.64 -0.5 2,966,858 - HP15_2820 0.69 -0.7 2,966,885 - HP15_2820 0.71 +0.9 2,967,039 + HP15_2820 0.79 -0.1 2,967,151 + HP15_2820 0.85 -0.8 2,967,330 + +0.5 2,967,338 - -0.7 2,967,370 - -0.7 2,967,375 - -0.7 2,967,402 + +0.6 2,967,402 + -0.1 2,967,418 + -0.6 2,967,429 + +0.1 2,967,657 - HP15_2821 0.82 -1.0 2,967,673 + HP15_2821 0.89 -0.4 2,967,685 + +1.5 2,967,693 - +0.4 2,967,693 - +1.2 2,967,693 - +0.7 2,967,773 - -0.8 2,967,845 - -0.2 2,967,857 - -0.3 2,968,037 + HP15_2822 0.46 -1.1 2,968,045 - HP15_2822 0.48 -0.4 2,968,045 - HP15_2822 0.48 +0.5 2,968,061 + HP15_2822 0.51 -0.8 2,968,091 - HP15_2822 0.57 +0.1 2,968,165 + HP15_2822 0.73 -0.3 2,968,165 + HP15_2822 0.73 -0.3 2,968,165 + HP15_2822 0.73 -0.2 2,968,165 + HP15_2822 0.73 +1.3 2,968,173 - HP15_2822 0.74 +0.3 2,968,173 - HP15_2822 0.74 -0.3 2,968,173 - HP15_2822 0.74 -0.4 2,968,173 - HP15_2822 0.74 -0.1 2,968,501 + HP15_2823 0.21 -0.1 2,968,504 - HP15_2823 0.21 -1.4 2,968,509 - HP15_2823 0.22 +0.8 2,968,511 + HP15_2823 0.22 +0.8 2,968,595 - HP15_2823 0.30 +0.2 2,968,609 + HP15_2823 0.31 -0.2 2,968,610 - HP15_2823 0.32 +0.2
Or see this region's nucleotide sequence