Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2699 and HP15_2700 overlap by 17 nucleotides HP15_2700 and HP15_2701 are separated by 13 nucleotides HP15_2701 and HP15_2702 are separated by 75 nucleotides
HP15_2699: HP15_2699 - phenylacetate-CoA oxygenase, PaaI subunit, at 2,851,326 to 2,852,090
_2699
HP15_2700: HP15_2700 - phenylacetate-CoA oxygenase, PaaJ subunit, at 2,852,074 to 2,852,643
_2700
HP15_2701: HP15_2701 - phenylacetic acid degradation oxidoreductase PaaK, at 2,852,657 to 2,853,736
_2701
HP15_2702: HP15_2702 - bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase, at 2,853,812 to 2,855,869
_2702
Position (kb)
2852
2853
2854 Strain fitness (log2 ratio)
-2
-1
0
1 at 2851.939 kb on - strand, within HP15_2699 at 2851.959 kb on - strand, within HP15_2699 at 2851.988 kb on + strand, within HP15_2699 at 2852.037 kb on - strand at 2852.207 kb on - strand, within HP15_2700 at 2852.231 kb on - strand, within HP15_2700 at 2852.301 kb on - strand, within HP15_2700 at 2852.590 kb on - strand at 2852.850 kb on + strand, within HP15_2701 at 2853.032 kb on - strand, within HP15_2701 at 2853.176 kb on - strand, within HP15_2701 at 2853.760 kb on + strand at 2854.013 kb on + strand at 2854.042 kb on - strand, within HP15_2702 at 2854.242 kb on + strand, within HP15_2702 at 2854.370 kb on + strand, within HP15_2702 at 2854.596 kb on - strand, within HP15_2702 at 2854.597 kb on + strand, within HP15_2702
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 2,851,939 - HP15_2699 0.80 -1.2 2,851,959 - HP15_2699 0.83 +0.0 2,851,988 + HP15_2699 0.87 +0.5 2,852,037 - -0.5 2,852,207 - HP15_2700 0.23 -1.1 2,852,231 - HP15_2700 0.28 +0.5 2,852,301 - HP15_2700 0.40 -0.7 2,852,590 - -1.2 2,852,850 + HP15_2701 0.18 -0.4 2,853,032 - HP15_2701 0.35 -1.8 2,853,176 - HP15_2701 0.48 -1.3 2,853,760 + +0.0 2,854,013 + +0.3 2,854,042 - HP15_2702 0.11 -0.1 2,854,242 + HP15_2702 0.21 +1.0 2,854,370 + HP15_2702 0.27 +1.5 2,854,596 - HP15_2702 0.38 +0.2 2,854,597 + HP15_2702 0.38 -0.9
Or see this region's nucleotide sequence