Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2580 and HP15_2581 are separated by 353 nucleotides HP15_2581 and HP15_2582 overlap by 1 nucleotides HP15_2582 and HP15_2583 overlap by 4 nucleotides
HP15_2580: HP15_2580 - 2,4-dienoyl-CoA reductase, at 2,728,291 to 2,730,345
_2580
HP15_2581: HP15_2581 - monovalent cation/H+ antiporter subunit A, at 2,730,699 to 2,733,500
_2581
HP15_2582: HP15_2582 - NADH-ubiquinone oxidoreductase, chain 4L, at 2,733,500 to 2,733,868
_2582
HP15_2583: HP15_2583 - monovalent cation/H+ antiporter subunit D, at 2,733,865 to 2,735,382
_2583
Position (kb)
2730
2731
2732
2733
2734 Strain fitness (log2 ratio)
-2
-1
0
1 at 2730.069 kb on - strand, within HP15_2580 at 2730.191 kb on + strand at 2730.204 kb on + strand at 2730.206 kb on + strand at 2730.206 kb on + strand at 2730.212 kb on - strand at 2730.212 kb on - strand at 2730.223 kb on + strand at 2730.342 kb on - strand at 2730.400 kb on + strand at 2730.439 kb on - strand at 2730.465 kb on + strand at 2730.491 kb on - strand at 2730.544 kb on + strand at 2730.549 kb on + strand at 2730.616 kb on + strand at 2730.636 kb on + strand at 2730.844 kb on + strand at 2730.852 kb on - strand at 2731.071 kb on - strand, within HP15_2581 at 2731.107 kb on + strand, within HP15_2581 at 2731.210 kb on + strand, within HP15_2581 at 2731.210 kb on + strand, within HP15_2581 at 2731.223 kb on - strand, within HP15_2581 at 2731.324 kb on + strand, within HP15_2581 at 2731.388 kb on + strand, within HP15_2581 at 2731.495 kb on + strand, within HP15_2581 at 2731.503 kb on - strand, within HP15_2581 at 2731.558 kb on + strand, within HP15_2581 at 2731.708 kb on - strand, within HP15_2581 at 2731.839 kb on + strand, within HP15_2581 at 2731.891 kb on + strand, within HP15_2581 at 2731.995 kb on + strand, within HP15_2581 at 2732.054 kb on - strand, within HP15_2581 at 2732.211 kb on - strand, within HP15_2581 at 2732.339 kb on + strand, within HP15_2581 at 2732.420 kb on + strand, within HP15_2581 at 2732.433 kb on - strand, within HP15_2581 at 2732.489 kb on - strand, within HP15_2581 at 2732.609 kb on + strand, within HP15_2581 at 2732.664 kb on - strand, within HP15_2581 at 2733.259 kb on + strand at 2733.259 kb on + strand at 2733.421 kb on + strand at 2733.448 kb on - strand at 2733.448 kb on - strand at 2733.459 kb on + strand at 2733.520 kb on + strand at 2733.672 kb on + strand, within HP15_2582 at 2733.710 kb on + strand, within HP15_2582 at 2733.720 kb on - strand, within HP15_2582 at 2733.728 kb on - strand, within HP15_2582 at 2733.922 kb on - strand at 2733.959 kb on + strand at 2734.328 kb on - strand, within HP15_2583 at 2734.422 kb on + strand, within HP15_2583
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 2,730,069 - HP15_2580 0.87 +0.4 2,730,191 + -0.5 2,730,204 + +0.4 2,730,206 + +0.2 2,730,206 + -0.1 2,730,212 - -0.2 2,730,212 - -0.0 2,730,223 + +0.4 2,730,342 - -0.2 2,730,400 + -0.3 2,730,439 - -1.6 2,730,465 + -0.3 2,730,491 - -0.5 2,730,544 + -1.2 2,730,549 + +0.1 2,730,616 + -0.5 2,730,636 + -0.1 2,730,844 + -2.5 2,730,852 - -1.1 2,731,071 - HP15_2581 0.13 -0.9 2,731,107 + HP15_2581 0.15 -0.9 2,731,210 + HP15_2581 0.18 -1.0 2,731,210 + HP15_2581 0.18 +0.8 2,731,223 - HP15_2581 0.19 -1.5 2,731,324 + HP15_2581 0.22 +0.4 2,731,388 + HP15_2581 0.25 +0.3 2,731,495 + HP15_2581 0.28 +0.9 2,731,503 - HP15_2581 0.29 +0.6 2,731,558 + HP15_2581 0.31 -1.3 2,731,708 - HP15_2581 0.36 -1.2 2,731,839 + HP15_2581 0.41 +0.1 2,731,891 + HP15_2581 0.43 -1.7 2,731,995 + HP15_2581 0.46 -1.6 2,732,054 - HP15_2581 0.48 -1.7 2,732,211 - HP15_2581 0.54 -1.0 2,732,339 + HP15_2581 0.59 -0.9 2,732,420 + HP15_2581 0.61 -0.0 2,732,433 - HP15_2581 0.62 -1.6 2,732,489 - HP15_2581 0.64 -0.0 2,732,609 + HP15_2581 0.68 -0.7 2,732,664 - HP15_2581 0.70 +0.5 2,733,259 + +0.9 2,733,259 + -1.2 2,733,421 + -0.6 2,733,448 - -1.5 2,733,448 - +0.1 2,733,459 + -0.7 2,733,520 + -0.8 2,733,672 + HP15_2582 0.47 -1.3 2,733,710 + HP15_2582 0.57 -2.2 2,733,720 - HP15_2582 0.60 -0.9 2,733,728 - HP15_2582 0.62 +0.9 2,733,922 - -0.4 2,733,959 + -1.0 2,734,328 - HP15_2583 0.31 +1.2 2,734,422 + HP15_2583 0.37 -1.5
Or see this region's nucleotide sequence