Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_1965 and HP15_1966 overlap by 4 nucleotides HP15_1966 and HP15_1967 overlap by 4 nucleotides
HP15_1965: HP15_1965 - phage portal protein, lambda family, at 2,082,382 to 2,083,980
_1965
HP15_1966: HP15_1966 - head-to-tail joining protein W, GpW, at 2,083,977 to 2,084,183
_1966
HP15_1967: HP15_1967 - phage terminase large subunit (GpA), at 2,084,180 to 2,086,012
_1967
Position (kb)
2083
2084
2085 Strain fitness (log2 ratio)
-2
-1
0
1 at 2083.037 kb on + strand, within HP15_1965 at 2083.054 kb on - strand, within HP15_1965 at 2083.071 kb on + strand, within HP15_1965 at 2083.105 kb on + strand, within HP15_1965 at 2083.185 kb on + strand, within HP15_1965 at 2083.200 kb on + strand, within HP15_1965 at 2083.244 kb on - strand, within HP15_1965 at 2083.297 kb on + strand, within HP15_1965 at 2083.405 kb on - strand, within HP15_1965 at 2083.424 kb on - strand, within HP15_1965 at 2083.460 kb on - strand, within HP15_1965 at 2083.469 kb on + strand, within HP15_1965 at 2083.669 kb on + strand, within HP15_1965 at 2083.677 kb on - strand, within HP15_1965 at 2083.683 kb on - strand, within HP15_1965 at 2083.688 kb on - strand, within HP15_1965 at 2083.695 kb on - strand, within HP15_1965 at 2083.724 kb on + strand, within HP15_1965 at 2083.782 kb on + strand, within HP15_1965 at 2083.782 kb on + strand, within HP15_1965 at 2083.864 kb on - strand at 2083.877 kb on + strand at 2083.897 kb on + strand at 2083.905 kb on - strand at 2084.143 kb on - strand, within HP15_1966 at 2084.265 kb on - strand at 2084.265 kb on - strand at 2084.292 kb on + strand at 2084.331 kb on - strand at 2084.395 kb on - strand, within HP15_1967 at 2084.410 kb on - strand, within HP15_1967 at 2084.430 kb on - strand, within HP15_1967 at 2084.477 kb on + strand, within HP15_1967 at 2084.544 kb on - strand, within HP15_1967 at 2084.580 kb on + strand, within HP15_1967 at 2084.707 kb on - strand, within HP15_1967 at 2084.772 kb on - strand, within HP15_1967 at 2084.818 kb on - strand, within HP15_1967 at 2084.888 kb on - strand, within HP15_1967 at 2085.060 kb on - strand, within HP15_1967 at 2085.072 kb on - strand, within HP15_1967 at 2085.101 kb on - strand, within HP15_1967 at 2085.170 kb on + strand, within HP15_1967 at 2085.170 kb on + strand, within HP15_1967 at 2085.178 kb on - strand, within HP15_1967
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 2,083,037 + HP15_1965 0.41 -0.7 2,083,054 - HP15_1965 0.42 -0.0 2,083,071 + HP15_1965 0.43 +1.0 2,083,105 + HP15_1965 0.45 -0.7 2,083,185 + HP15_1965 0.50 -1.9 2,083,200 + HP15_1965 0.51 +1.1 2,083,244 - HP15_1965 0.54 +0.1 2,083,297 + HP15_1965 0.57 -0.6 2,083,405 - HP15_1965 0.64 -0.2 2,083,424 - HP15_1965 0.65 -0.5 2,083,460 - HP15_1965 0.67 -0.2 2,083,469 + HP15_1965 0.68 +0.1 2,083,669 + HP15_1965 0.80 +1.2 2,083,677 - HP15_1965 0.81 -0.2 2,083,683 - HP15_1965 0.81 +0.6 2,083,688 - HP15_1965 0.82 -0.3 2,083,695 - HP15_1965 0.82 -0.6 2,083,724 + HP15_1965 0.84 -1.5 2,083,782 + HP15_1965 0.88 +0.9 2,083,782 + HP15_1965 0.88 -0.4 2,083,864 - -0.5 2,083,877 + +0.2 2,083,897 + -0.4 2,083,905 - +0.4 2,084,143 - HP15_1966 0.80 -0.6 2,084,265 - +0.1 2,084,265 - +0.7 2,084,292 + -1.0 2,084,331 - -0.1 2,084,395 - HP15_1967 0.12 -1.0 2,084,410 - HP15_1967 0.13 +0.2 2,084,430 - HP15_1967 0.14 -1.6 2,084,477 + HP15_1967 0.16 +0.8 2,084,544 - HP15_1967 0.20 +0.3 2,084,580 + HP15_1967 0.22 +0.4 2,084,707 - HP15_1967 0.29 +0.9 2,084,772 - HP15_1967 0.32 -0.2 2,084,818 - HP15_1967 0.35 +1.7 2,084,888 - HP15_1967 0.39 -1.3 2,085,060 - HP15_1967 0.48 +0.6 2,085,072 - HP15_1967 0.49 +0.1 2,085,101 - HP15_1967 0.50 +0.4 2,085,170 + HP15_1967 0.54 +0.3 2,085,170 + HP15_1967 0.54 +0.3 2,085,178 - HP15_1967 0.54 -1.3
Or see this region's nucleotide sequence