Strain Fitness in Marinobacter adhaerens HP15 around HP15_1765

Experiment: m.b. 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1764 and HP15_1765 are separated by 380 nucleotidesHP15_1765 and HP15_1766 overlap by 11 nucleotides HP15_1764: HP15_1764 - two-component response regulator, at 1,861,984 to 1,862,925 _1764 HP15_1765: HP15_1765 - HD superfamily phosphohydrolase, at 1,863,306 to 1,864,790 _1765 HP15_1766: HP15_1766 - FAD dependent oxidoreductase, at 1,864,780 to 1,865,808 _1766 Position (kb) 1863 1864 1865Strain fitness (log2 ratio) -2 -1 0 1 2at 1862.312 kb on - strand, within HP15_1764at 1862.422 kb on - strand, within HP15_1764at 1862.551 kb on - strand, within HP15_1764at 1862.573 kb on + strand, within HP15_1764at 1862.578 kb on + strand, within HP15_1764at 1862.680 kb on - strand, within HP15_1764at 1862.730 kb on + strand, within HP15_1764at 1862.778 kb on + strand, within HP15_1764at 1862.928 kb on - strandat 1863.175 kb on - strandat 1863.207 kb on - strandat 1863.256 kb on + strandat 1863.374 kb on - strandat 1863.427 kb on - strandat 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.502 kb on + strand, within HP15_1765at 1863.510 kb on - strand, within HP15_1765at 1863.510 kb on - strand, within HP15_1765at 1863.510 kb on - strand, within HP15_1765at 1863.528 kb on + strand, within HP15_1765at 1863.564 kb on - strand, within HP15_1765at 1863.589 kb on + strand, within HP15_1765at 1863.595 kb on + strand, within HP15_1765at 1863.597 kb on - strand, within HP15_1765at 1863.597 kb on - strand, within HP15_1765at 1863.778 kb on + strand, within HP15_1765at 1863.778 kb on + strand, within HP15_1765at 1863.870 kb on - strand, within HP15_1765at 1864.128 kb on - strand, within HP15_1765at 1864.167 kb on - strand, within HP15_1765at 1864.268 kb on - strand, within HP15_1765at 1864.328 kb on - strand, within HP15_1765at 1864.339 kb on + strand, within HP15_1765at 1864.350 kb on + strand, within HP15_1765at 1864.572 kb on - strand, within HP15_1765at 1864.572 kb on - strand, within HP15_1765at 1864.630 kb on + strand, within HP15_1765at 1864.691 kb on + strandat 1864.785 kb on + strandat 1865.132 kb on + strand, within HP15_1766at 1865.132 kb on + strand, within HP15_1766at 1865.132 kb on + strand, within HP15_1766at 1865.218 kb on - strand, within HP15_1766at 1865.366 kb on + strand, within HP15_1766at 1865.434 kb on - strand, within HP15_1766at 1865.436 kb on + strand, within HP15_1766at 1865.552 kb on - strand, within HP15_1766at 1865.552 kb on - strand, within HP15_1766at 1865.606 kb on + strand, within HP15_1766at 1865.673 kb on + strand, within HP15_1766at 1865.706 kb on + strandat 1865.747 kb on - strandat 1865.756 kb on - strandat 1865.756 kb on - strandat 1865.773 kb on + strandat 1865.787 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 30C
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1,862,312 - HP15_1764 0.35 -0.1
1,862,422 - HP15_1764 0.46 -0.1
1,862,551 - HP15_1764 0.60 +0.2
1,862,573 + HP15_1764 0.63 -0.7
1,862,578 + HP15_1764 0.63 -0.7
1,862,680 - HP15_1764 0.74 -1.4
1,862,730 + HP15_1764 0.79 +0.6
1,862,778 + HP15_1764 0.84 -0.0
1,862,928 - -1.5
1,863,175 - +0.2
1,863,207 - +0.4
1,863,256 + -1.6
1,863,374 - -0.2
1,863,427 - -0.0
1,863,502 + HP15_1765 0.13 -0.5
1,863,502 + HP15_1765 0.13 -0.5
1,863,502 + HP15_1765 0.13 -0.9
1,863,502 + HP15_1765 0.13 -0.8
1,863,502 + HP15_1765 0.13 -1.1
1,863,502 + HP15_1765 0.13 -0.7
1,863,510 - HP15_1765 0.14 +0.4
1,863,510 - HP15_1765 0.14 -0.3
1,863,510 - HP15_1765 0.14 -0.9
1,863,528 + HP15_1765 0.15 -1.5
1,863,564 - HP15_1765 0.17 -0.5
1,863,589 + HP15_1765 0.19 -1.9
1,863,595 + HP15_1765 0.19 -0.4
1,863,597 - HP15_1765 0.20 -0.4
1,863,597 - HP15_1765 0.20 -0.7
1,863,778 + HP15_1765 0.32 -1.0
1,863,778 + HP15_1765 0.32 +2.2
1,863,870 - HP15_1765 0.38 -0.1
1,864,128 - HP15_1765 0.55 -1.4
1,864,167 - HP15_1765 0.58 -0.5
1,864,268 - HP15_1765 0.65 -0.1
1,864,328 - HP15_1765 0.69 -0.5
1,864,339 + HP15_1765 0.70 -0.2
1,864,350 + HP15_1765 0.70 -0.5
1,864,572 - HP15_1765 0.85 -0.3
1,864,572 - HP15_1765 0.85 -1.4
1,864,630 + HP15_1765 0.89 +0.4
1,864,691 + +0.3
1,864,785 + +0.4
1,865,132 + HP15_1766 0.34 -0.5
1,865,132 + HP15_1766 0.34 +1.2
1,865,132 + HP15_1766 0.34 +0.8
1,865,218 - HP15_1766 0.43 +0.5
1,865,366 + HP15_1766 0.57 +0.8
1,865,434 - HP15_1766 0.64 -0.7
1,865,436 + HP15_1766 0.64 +0.3
1,865,552 - HP15_1766 0.75 -0.1
1,865,552 - HP15_1766 0.75 -0.8
1,865,606 + HP15_1766 0.80 +1.0
1,865,673 + HP15_1766 0.87 +0.7
1,865,706 + -1.4
1,865,747 - +0.2
1,865,756 - +0.5
1,865,756 - -0.1
1,865,773 + -0.7
1,865,787 + -1.8

Or see this region's nucleotide sequence