Strain Fitness in Marinobacter adhaerens HP15 around HP15_1282

Experiment: m.b. 30C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_1281 and HP15_1282 are separated by 210 nucleotidesHP15_1282 and HP15_1283 are separated by 206 nucleotides HP15_1281: HP15_1281 - membrane protein containing DUF368, at 1,341,321 to 1,342,310 _1281 HP15_1282: HP15_1282 - peptidase M23B, at 1,342,521 to 1,343,411 _1282 HP15_1283: HP15_1283 - RNA polymerase, sigma 70 subunit, RpoD family, at 1,343,618 to 1,344,613 _1283 Position (kb) 1342 1343 1344Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1342.276 kb on + strandat 1342.309 kb on + strandat 1342.317 kb on - strandat 1342.342 kb on - strandat 1342.378 kb on - strandat 1342.618 kb on - strand, within HP15_1282at 1342.766 kb on - strand, within HP15_1282at 1342.778 kb on - strand, within HP15_1282at 1342.883 kb on + strand, within HP15_1282at 1343.024 kb on + strand, within HP15_1282at 1343.032 kb on - strand, within HP15_1282at 1343.056 kb on + strand, within HP15_1282at 1343.179 kb on - strand, within HP15_1282at 1343.242 kb on + strand, within HP15_1282at 1343.311 kb on - strand, within HP15_1282at 1343.431 kb on - strandat 1343.448 kb on + strandat 1343.448 kb on + strandat 1343.448 kb on + strandat 1343.743 kb on - strand, within HP15_1283at 1343.775 kb on + strand, within HP15_1283at 1343.775 kb on + strand, within HP15_1283at 1343.793 kb on + strand, within HP15_1283at 1343.877 kb on + strand, within HP15_1283at 1343.924 kb on - strand, within HP15_1283at 1343.969 kb on + strand, within HP15_1283at 1343.994 kb on + strand, within HP15_1283at 1343.994 kb on + strand, within HP15_1283at 1343.997 kb on - strand, within HP15_1283at 1344.004 kb on + strand, within HP15_1283at 1344.012 kb on - strand, within HP15_1283at 1344.012 kb on - strand, within HP15_1283at 1344.341 kb on + strand, within HP15_1283at 1344.390 kb on - strand, within HP15_1283at 1344.396 kb on + strand, within HP15_1283

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 30C
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1,342,276 + -0.7
1,342,309 + -1.1
1,342,317 - -2.3
1,342,342 - -0.1
1,342,378 - +0.2
1,342,618 - HP15_1282 0.11 +0.5
1,342,766 - HP15_1282 0.27 -3.5
1,342,778 - HP15_1282 0.29 -3.2
1,342,883 + HP15_1282 0.41 -3.6
1,343,024 + HP15_1282 0.56 -3.8
1,343,032 - HP15_1282 0.57 -2.1
1,343,056 + HP15_1282 0.60 -3.4
1,343,179 - HP15_1282 0.74 -2.5
1,343,242 + HP15_1282 0.81 -3.1
1,343,311 - HP15_1282 0.89 -3.5
1,343,431 - +0.7
1,343,448 + -0.3
1,343,448 + -0.7
1,343,448 + -0.9
1,343,743 - HP15_1283 0.13 +0.4
1,343,775 + HP15_1283 0.16 -0.1
1,343,775 + HP15_1283 0.16 +0.2
1,343,793 + HP15_1283 0.18 -0.1
1,343,877 + HP15_1283 0.26 +0.4
1,343,924 - HP15_1283 0.31 +0.4
1,343,969 + HP15_1283 0.35 -0.1
1,343,994 + HP15_1283 0.38 -0.4
1,343,994 + HP15_1283 0.38 +0.4
1,343,997 - HP15_1283 0.38 -0.5
1,344,004 + HP15_1283 0.39 -0.1
1,344,012 - HP15_1283 0.40 -0.0
1,344,012 - HP15_1283 0.40 -0.3
1,344,341 + HP15_1283 0.73 +0.8
1,344,390 - HP15_1283 0.78 -0.1
1,344,396 + HP15_1283 0.78 -0.4

Or see this region's nucleotide sequence