Strain Fitness in Shewanella amazonensis SB2B around Sama_0064

Experiment: 1-ethyl-3-methylimidazolium acetate 15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 15 mM
69,079	+				-0.4
69,089	-				-0.4
69,110	+				-0.1
69,110	+				-0.5
69,110	+				-0.6
69,110	+				-0.6
69,110	+				+0.2
69,111	-				-0.3
69,111	-				-2.0
69,111	-				-0.1
69,111	-				-1.9
69,111	-				-0.1
69,111	-				+0.2
69,143	-				-0.2
69,208	+				-0.2
69,208	+				-1.7
69,208	+				-0.1
69,208	+				+1.9
69,209	-				+0.4
69,209	-				-0.4
69,209	-				-1.1
69,209	-				-0.3
69,209	-				+1.5
69,209	-				-1.1
69,209	-				-1.3
69,209	-				-0.6
69,209	-				+0.7
69,209	-				+0.8
69,209	-				+1.6
69,209	-				-0.4
69,209	-				+1.2
69,289	+		Sama_0064	0.11	-0.6
69,310	+		Sama_0064	0.13	+0.4
69,311	-		Sama_0064	0.13	+0.5
69,311	-		Sama_0064	0.13	-1.6
69,344	+		Sama_0064	0.16	-0.0
69,345	-		Sama_0064	0.16	+2.4
69,345	+		Sama_0064	0.16	+0.0
69,369	+		Sama_0064	0.18	+0.9
69,406	+		Sama_0064	0.21	+0.3
69,407	-		Sama_0064	0.21	-0.9
69,407	-		Sama_0064	0.21	+0.6
69,437	+		Sama_0064	0.24	+0.7
69,489	+		Sama_0064	0.28	+0.8
69,489	+		Sama_0064	0.28	-0.6
69,489	+		Sama_0064	0.28	-0.4
69,489	+		Sama_0064	0.28	+0.2
69,490	-		Sama_0064	0.28	-1.0
69,490	-		Sama_0064	0.28	-0.4
69,528	+		Sama_0064	0.31	-1.3
69,556	+		Sama_0064	0.34	-0.2
69,556	+		Sama_0064	0.34	-1.4
69,556	+		Sama_0064	0.34	-0.2
69,556	+		Sama_0064	0.34	+1.7
69,719	-		Sama_0064	0.47	-1.1
69,719	-		Sama_0064	0.47	-0.6
69,846	+		Sama_0064	0.58	+1.2
69,846	+		Sama_0064	0.58	+0.2
69,847	-		Sama_0064	0.58	+0.0
69,847	-		Sama_0064	0.58	-0.4
69,847	-		Sama_0064	0.58	-1.5
69,851	-		Sama_0064	0.59	-0.9
69,851	-		Sama_0064	0.59	-1.0
69,851	-		Sama_0064	0.59	-0.1
69,851	-		Sama_0064	0.59	-0.2
69,851	-		Sama_0064	0.59	+0.2
69,880	-		Sama_0064	0.61	-0.5
69,897	-		Sama_0064	0.62	-0.2
69,924	+		Sama_0064	0.65	-0.2
69,924	+		Sama_0064	0.65	+0.9
69,924	+		Sama_0064	0.65	+0.3
69,924	+		Sama_0064	0.65	-0.7
69,924	+		Sama_0064	0.65	+0.3
69,924	+		Sama_0064	0.65	-0.1
69,924	+		Sama_0064	0.65	-1.0
69,924	+		Sama_0064	0.65	+0.3
69,924	+		Sama_0064	0.65	-0.0
69,924	+		Sama_0064	0.65	-0.4
69,924	+		Sama_0064	0.65	-0.5
69,924	+		Sama_0064	0.65	-1.2
69,924	+		Sama_0064	0.65	-0.5
69,925	-		Sama_0064	0.65	+0.2
69,925	-		Sama_0064	0.65	-1.2
69,925	-		Sama_0064	0.65	-0.3
69,925	-		Sama_0064	0.65	+0.7
69,925	-		Sama_0064	0.65	+0.6
69,925	-		Sama_0064	0.65	-0.1
69,925	-		Sama_0064	0.65	+1.1
69,925	-		Sama_0064	0.65	+1.0
69,925	-		Sama_0064	0.65	-0.4
69,925	-		Sama_0064	0.65	+0.1
69,925	-		Sama_0064	0.65	-0.2
69,925	-		Sama_0064	0.65	+0.3
69,925	-		Sama_0064	0.65	+0.2
69,925	-		Sama_0064	0.65	-0.4
70,008	+		Sama_0064	0.72	+0.0
70,053	+		Sama_0064	0.75	+0.2
70,053	+		Sama_0064	0.75	+0.7
70,053	+		Sama_0064	0.75	+0.8
70,053	+		Sama_0064	0.75	+0.4
70,053	+		Sama_0064	0.75	+0.3
70,053	+		Sama_0064	0.75	-0.1
70,053	+		Sama_0064	0.75	+0.6
70,054	-		Sama_0064	0.76	+0.5
70,054	-		Sama_0064	0.76	+1.2
70,054	-		Sama_0064	0.76	+0.8
70,070	-		Sama_0064	0.77	+0.6
70,118	+		Sama_0064	0.81	-0.1
70,119	-		Sama_0064	0.81	-0.1
70,119	-		Sama_0064	0.81	+0.0
70,119	-		Sama_0064	0.81	+1.1
70,195	+		Sama_0064	0.87	-0.3
70,196	-		Sama_0064	0.87	-0.9
70,247	+				+0.1
70,247	+				+0.0
70,248	-				-0.1
70,292	+				-0.5
70,344	-				-0.5
70,367	+				-1.1
70,404	+				+0.5
70,404	+				+0.3
70,405	-				-0.1
70,405	-				+0.9
70,405	-				+0.9
70,405	-				+0.1
70,405	-				-1.1
70,496	+				-1.1
70,496	+				+0.2
70,497	-				-0.4
70,497	-				-2.1
70,497	-				+0.2
70,497	-				-0.5
70,541	+				+0.2
70,577	+				-0.4
70,598	-				-0.2
70,656	+				+0.3
70,656	+				+0.1
70,656	+				+0.5
70,656	+				+0.0
70,656	+				-0.3
70,656	+				+1.4
70,656	+				-0.1
70,657	-				+0.1
70,657	-				-1.2
70,657	-				+1.9
70,657	-				-1.2
70,657	-				-0.6
70,657	-				-0.4
70,657	-				-0.4
70,657	-				+0.8
70,657	-				-0.6
70,657	-				-0.2
70,657	-				-0.1
70,657	-				-1.3
70,684	+				+0.6
70,684	+				-0.5
70,684	+				+0.0
70,685	-				+2.5
70,691	+				+0.1
70,691	+				-0.2
70,692	-				-0.1
70,727	+				+0.4
70,728	-				-1.6
70,728	-				+0.1
70,751	+				-1.4
70,751	+				+0.4
70,751	+				-0.1
70,751	+				-2.6
70,751	+				+0.4
70,752	-				-1.1
70,753	+				+0.4
70,753	+				-0.6
70,753	+				+0.3
70,753	+				+0.5
70,753	+				-0.6
70,753	+				+0.3
70,753	+				+0.1
70,753	+				+0.2
70,753	+				+0.5
70,753	+				-0.2
70,753	+				-1.2
70,753	+				+0.4
70,753	+				+0.9
70,753	+				-0.6
70,753	+				+0.3
70,753	+				+0.0
70,753	+				-0.4
70,753	+				-1.3
70,753	+				-0.4
70,754	-				+0.6
70,754	-				+0.6
70,754	-				-0.1
70,754	-				-0.4
70,754	-				+0.2
70,754	-				-0.8
70,754	-				-0.6
70,754	-				+1.2
70,754	-				+0.1
70,754	-				-0.1
70,754	-				-0.8
70,754	-				+0.7
70,754	-				-0.1
70,754	-				+0.2
70,754	-				+0.6
70,754	-				-0.4
70,754	-				+1.4
70,754	-				-3.1
70,754	-				-0.2
70,754	-				+0.5
70,754	-				+0.2
70,754	-				-0.0
70,754	-				-1.1
70,754	-				+0.3
70,759	+				+0.0
70,759	+				+1.4
70,759	+				-0.2
70,767	+				-0.2
70,767	+				+0.1
70,768	-				+0.5
70,768	-				-0.2
70,787	+				+0.9
70,788	-				+0.7
70,790	+				-1.1
70,790	+				+0.9
70,790	+				+0.7
70,790	+				+0.3
70,790	+				-1.5
70,791	-				+0.9
70,817	-				-0.1
70,821	+				+0.5
70,821	+				+0.8
70,821	+				+0.5
70,822	-				+0.4
70,822	-				+0.9
70,847	+				-0.8
70,847	+				-0.5
70,857	+				-0.4
70,878	+				-0.4
70,878	+				+0.2
70,924	+				+0.2
70,924	+				+0.9
70,924	+				+0.5
70,924	+				-1.1
70,924	+				-0.5
70,924	+				-1.3
70,924	+				-0.6
70,925	-				+0.5
70,925	-				+0.5
70,925	-				+0.4
70,925	-				-0.6
70,925	-				-0.9
70,925	-				-1.3
70,931	+				+0.9
70,931	+				+1.2
70,931	+				-0.4
70,931	+				-0.1
70,932	-				+1.2
70,932	-				+0.2
70,932	-				-1.4
70,932	-				-0.8
70,950	+				+0.1
70,968	-				-0.3
71,013	+		Sama_0065	0.11	-0.3
71,013	+		Sama_0065	0.11	-0.3
71,014	-		Sama_0065	0.11	-0.4
71,082	-		Sama_0065	0.19	+1.9
71,082	-		Sama_0065	0.19	+0.7
71,101	+		Sama_0065	0.21	+0.3
71,102	-		Sama_0065	0.21	+0.9
71,102	-		Sama_0065	0.21	+0.4
71,102	-		Sama_0065	0.21	-0.5
71,102	-		Sama_0065	0.21	+0.0
71,102	-		Sama_0065	0.21	-0.1
71,120	+		Sama_0065	0.23	-0.7
71,120	+		Sama_0065	0.23	+0.2
71,195	-		Sama_0065	0.31	+0.7
71,221	+		Sama_0065	0.34	-0.4
71,221	+		Sama_0065	0.34	-1.8
71,222	-		Sama_0065	0.34	-0.2
71,222	-		Sama_0065	0.34	+0.8
71,222	-		Sama_0065	0.34	+0.2
71,222	-		Sama_0065	0.34	+0.3
71,222	-		Sama_0065	0.34	+2.1
71,249	+		Sama_0065	0.37	-0.3
71,249	+		Sama_0065	0.37	+0.1
71,250	-		Sama_0065	0.37	+0.4
71,276	+		Sama_0065	0.40	+0.4
71,276	+		Sama_0065	0.40	+0.6
71,276	+		Sama_0065	0.40	+0.2
71,276	+		Sama_0065	0.40	-0.5
71,277	-		Sama_0065	0.40	+0.4
71,277	-		Sama_0065	0.40	+0.1
71,277	-		Sama_0065	0.40	+1.1
71,277	-		Sama_0065	0.40	+1.8
71,277	-		Sama_0065	0.40	+0.2
71,277	-		Sama_0065	0.40	+0.6
71,277	-		Sama_0065	0.40	+1.2
71,277	-		Sama_0065	0.40	+0.7
71,277	-		Sama_0065	0.40	+0.9
71,339	+		Sama_0065	0.47	-1.4
71,339	+		Sama_0065	0.47	+0.5
71,340	-		Sama_0065	0.47	+1.4
71,341	+		Sama_0065	0.47	+0.1
71,341	+		Sama_0065	0.47	-0.2
71,341	+		Sama_0065	0.47	+0.7
71,341	+		Sama_0065	0.47	+0.5
71,341	+		Sama_0065	0.47	-0.4
71,341	+		Sama_0065	0.47	-0.2
71,341	+		Sama_0065	0.47	+1.2
71,341	+		Sama_0065	0.47	+0.9
71,341	+		Sama_0065	0.47	+0.6
71,341	+		Sama_0065	0.47	-0.1
71,342	-		Sama_0065	0.47	+1.2
71,342	-		Sama_0065	0.47	-0.2
71,342	-		Sama_0065	0.47	+0.3
71,342	-		Sama_0065	0.47	+0.4
71,342	-		Sama_0065	0.47	+0.2
71,342	-		Sama_0065	0.47	-0.3
71,342	-		Sama_0065	0.47	-0.9
71,342	-		Sama_0065	0.47	+0.4
71,343	+		Sama_0065	0.47	-0.1
71,343	+		Sama_0065	0.47	-0.6
71,344	-		Sama_0065	0.47	+0.5
71,344	-		Sama_0065	0.47	-0.4
71,344	-		Sama_0065	0.47	+0.9
71,344	-		Sama_0065	0.47	-0.1
71,344	-		Sama_0065	0.47	-0.9
71,344	-		Sama_0065	0.47	-0.3
71,344	-		Sama_0065	0.47	-0.1