Strain Fitness in Shewanella amazonensis SB2B around Sama_2982

Experiment: 1-ethyl-3-methylimidazolium acetate 15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	1-ethyl-3-methylimidazolium acetate 15 mM
3,552,147	+				-0.4
3,552,153	+				+0.8
3,552,177	+				+0.4
3,552,177	+				+0.1
3,552,181	+				-0.1
3,552,273	+				+0.4
3,552,274	-				-0.8
3,552,398	-				+0.8
3,552,398	-				+1.6
3,552,413	+				-1.2
3,552,413	+				+0.8
3,552,414	-				-0.2
3,552,415	+				-0.6
3,552,416	-				-0.2
3,552,416	-				+1.4
3,552,487	+				+1.4
3,552,488	-				-0.2
3,552,488	-				+0.2
3,552,488	-				-0.7
3,552,571	+				+0.3
3,552,572	-				-0.4
3,552,591	+				+2.1
3,552,592	-				-0.3
3,552,592	-				+0.3
3,552,592	-				+0.0
3,552,592	-				-0.2
3,552,592	-				+0.2
3,552,598	-				-0.2
3,552,598	-				-0.6
3,552,605	+				-0.1
3,552,605	+				-1.2
3,552,605	+				-0.8
3,552,721	+				-0.5
3,552,721	+				+0.3
3,552,721	+				+0.1
3,552,722	-				+0.2
3,552,722	-				+1.4
3,552,722	-				-0.6
3,552,726	-				+0.2
3,552,748	-				+1.0
3,552,748	-				+0.1
3,552,750	+				-0.6
3,552,750	+				-1.0
3,552,751	-				+0.8
3,552,751	-				+0.4
3,552,751	-				-0.4
3,552,751	-				+0.4
3,552,903	+				-2.2
3,552,903	+				-1.0
3,552,903	+				-0.2
3,552,915	-				+1.1
3,552,994	+				+0.2
3,552,995	-				-1.0
3,552,995	-				+0.8
3,553,009	+				-0.6
3,553,009	+				-1.1
3,553,010	-				+0.1
3,553,016	+				+0.2
3,553,016	+				-0.4
3,553,016	+				-0.6
3,553,017	-				+0.2
3,553,017	-				-0.0
3,553,017	-				+0.1
3,553,025	+				+0.8
3,553,038	-				-0.2
3,553,048	-				+0.6
3,553,060	-				-0.1
3,553,099	+				+0.9
3,553,099	+				+0.5
3,553,100	-				-0.2
3,553,126	+				-1.2
3,553,127	-				-0.6
3,553,127	-				+1.1
3,553,127	-				-1.4
3,553,127	-				+0.8
3,553,319	+		Sama_2982	0.76	-0.7
3,553,320	-		Sama_2982	0.76	+1.4
3,553,320	-		Sama_2982	0.76	-0.1
3,553,336	+		Sama_2982	0.82	-1.6
3,553,336	+		Sama_2982	0.82	+0.8
3,553,336	+		Sama_2982	0.82	-1.7
3,553,336	+		Sama_2982	0.82	-0.7
3,553,337	-		Sama_2982	0.83	-0.5
3,553,337	-		Sama_2982	0.83	+1.4
3,553,337	-		Sama_2982	0.83	-1.9
3,553,387	+				+0.0
3,553,387	+				+0.8
3,553,387	+				+0.7
3,553,387	+				+0.2
3,553,387	+				-0.2
3,553,388	-				-0.1
3,553,388	-				-0.9
3,553,388	-				+0.2
3,553,388	-				+0.5
3,553,388	-				+0.0
3,553,388	-				+0.3
3,553,388	-				-0.5
3,553,388	-				-1.2
3,553,388	-				+0.4
3,553,388	-				-0.5
3,553,407	-				-1.4
3,553,622	+				+0.0
3,553,622	+				+0.3
3,553,622	+				-0.8
3,553,623	-				+1.1
3,553,623	-				-0.2
3,553,632	+		Sama_2983	0.10	-0.3
3,553,633	-		Sama_2983	0.10	-0.2
3,553,653	+		Sama_2983	0.11	-0.4
3,553,654	-		Sama_2983	0.11	-0.1
3,553,654	-		Sama_2983	0.11	-0.3
3,553,654	-		Sama_2983	0.11	+0.4
3,553,704	+		Sama_2983	0.13	-0.2
3,553,704	+		Sama_2983	0.13	-0.8
3,553,704	+		Sama_2983	0.13	+0.4
3,553,705	-		Sama_2983	0.13	+0.2
3,553,807	+		Sama_2983	0.17	+0.3
3,553,807	+		Sama_2983	0.17	+0.8
3,553,807	+		Sama_2983	0.17	-0.2
3,553,807	+		Sama_2983	0.17	-0.0
3,553,807	+		Sama_2983	0.17	+0.1
3,553,807	+		Sama_2983	0.17	-0.5
3,553,807	+		Sama_2983	0.17	+0.8
3,553,807	+		Sama_2983	0.17	-0.8
3,553,808	-		Sama_2983	0.17	-0.6
3,553,808	-		Sama_2983	0.17	-0.8
3,553,808	-		Sama_2983	0.17	-0.6
3,553,808	-		Sama_2983	0.17	+0.2
3,553,808	-		Sama_2983	0.17	+0.2
3,553,811	+		Sama_2983	0.17	-0.2
3,553,811	+		Sama_2983	0.17	-0.1
3,553,811	+		Sama_2983	0.17	-0.2
3,553,811	+		Sama_2983	0.17	+0.0
3,553,811	+		Sama_2983	0.17	+0.5
3,553,812	-		Sama_2983	0.17	-0.2
3,553,812	-		Sama_2983	0.17	-1.0
3,553,812	-		Sama_2983	0.17	-0.5
3,553,812	-		Sama_2983	0.17	-0.1
3,553,812	-		Sama_2983	0.17	+1.4
3,553,812	-		Sama_2983	0.17	-0.9
3,553,812	-		Sama_2983	0.17	+0.1
3,553,812	-		Sama_2983	0.17	+0.4
3,553,848	+		Sama_2983	0.19	+0.2
3,553,848	+		Sama_2983	0.19	-1.2
3,553,849	-		Sama_2983	0.19	+0.1
3,553,889	+		Sama_2983	0.20	+0.5
3,553,889	+		Sama_2983	0.20	-0.1
3,553,890	-		Sama_2983	0.21	-1.2
3,553,890	-		Sama_2983	0.21	+0.8
3,553,940	+		Sama_2983	0.23	+0.4
3,553,941	-		Sama_2983	0.23	-0.6
3,553,941	-		Sama_2983	0.23	+1.4
3,553,946	+		Sama_2983	0.23	-1.0
3,553,947	-		Sama_2983	0.23	+0.1
3,553,947	-		Sama_2983	0.23	+0.5
3,553,956	-		Sama_2983	0.23	-1.0
3,553,977	+		Sama_2983	0.24	-0.7
3,553,978	-		Sama_2983	0.24	-2.0
3,553,978	-		Sama_2983	0.24	-0.2
3,554,108	+		Sama_2983	0.29	-1.4
3,554,108	+		Sama_2983	0.29	-0.1
3,554,108	+		Sama_2983	0.29	+0.1
3,554,109	-		Sama_2983	0.29	+0.4
3,554,109	-		Sama_2983	0.29	+0.8
3,554,142	-		Sama_2983	0.31	-1.1
3,554,152	+		Sama_2983	0.31	+0.4
3,554,152	+		Sama_2983	0.31	-0.2
3,554,152	+		Sama_2983	0.31	+0.5
3,554,153	-		Sama_2983	0.31	+0.4
3,554,153	-		Sama_2983	0.31	-1.6
3,554,153	-		Sama_2983	0.31	-1.2
3,554,177	+		Sama_2983	0.32	-0.0
3,554,199	+		Sama_2983	0.33	-0.1
3,554,199	+		Sama_2983	0.33	-1.2
3,554,199	+		Sama_2983	0.33	+0.4
3,554,199	+		Sama_2983	0.33	+0.3
3,554,199	+		Sama_2983	0.33	+0.4
3,554,199	+		Sama_2983	0.33	+0.0
3,554,199	+		Sama_2983	0.33	+0.2
3,554,199	+		Sama_2983	0.33	+1.2
3,554,200	-		Sama_2983	0.33	+0.4
3,554,200	-		Sama_2983	0.33	+0.5
3,554,200	-		Sama_2983	0.33	-1.2
3,554,200	-		Sama_2983	0.33	-1.2
3,554,200	-		Sama_2983	0.33	+0.0
3,554,200	-		Sama_2983	0.33	+0.2
3,554,200	-		Sama_2983	0.33	-0.4
3,554,200	-		Sama_2983	0.33	-0.4
3,554,200	-		Sama_2983	0.33	+0.8
3,554,200	-		Sama_2983	0.33	+0.1
3,554,200	-		Sama_2983	0.33	-0.8
3,554,221	+		Sama_2983	0.34	-0.0
3,554,222	-		Sama_2983	0.34	-0.8
3,554,222	-		Sama_2983	0.34	-0.3
3,554,222	-		Sama_2983	0.34	+0.0
3,554,275	+		Sama_2983	0.36	-0.1
3,554,275	+		Sama_2983	0.36	-1.3
3,554,275	+		Sama_2983	0.36	-0.5
3,554,275	+		Sama_2983	0.36	+0.8
3,554,275	+		Sama_2983	0.36	+0.8
3,554,275	+		Sama_2983	0.36	-0.5
3,554,275	+		Sama_2983	0.36	+0.3
3,554,275	+		Sama_2983	0.36	+1.4
3,554,275	+		Sama_2983	0.36	-1.8
3,554,275	+		Sama_2983	0.36	-0.0
3,554,275	+		Sama_2983	0.36	-0.4
3,554,275	+		Sama_2983	0.36	-0.4
3,554,275	+		Sama_2983	0.36	-0.6
3,554,276	-		Sama_2983	0.36	-0.8
3,554,276	-		Sama_2983	0.36	+1.2
3,554,276	-		Sama_2983	0.36	+0.8
3,554,276	-		Sama_2983	0.36	-0.6
3,554,276	-		Sama_2983	0.36	+0.4
3,554,276	-		Sama_2983	0.36	+0.2
3,554,276	-		Sama_2983	0.36	-0.1
3,554,276	-		Sama_2983	0.36	+0.1
3,554,276	-		Sama_2983	0.36	-1.5
3,554,276	-		Sama_2983	0.36	-0.2
3,554,276	-		Sama_2983	0.36	+0.2
3,554,276	-		Sama_2983	0.36	-0.8
3,554,276	-		Sama_2983	0.36	-0.7
3,554,276	-		Sama_2983	0.36	-0.6
3,554,276	-		Sama_2983	0.36	-0.2
3,554,276	-		Sama_2983	0.36	-0.0
3,554,276	-		Sama_2983	0.36	-0.0
3,554,280	+		Sama_2983	0.36	+0.1
3,554,364	+		Sama_2983	0.40	-1.2
3,554,364	+		Sama_2983	0.40	-0.6
3,554,365	-		Sama_2983	0.40	+0.5