Strain Fitness in Shewanella amazonensis SB2B around Sama_2934

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,485,888	+				+0.3
3,485,923	-				+0.1
3,485,923	-				+0.7
3,485,923	-				-0.6
3,485,926	+				-1.0
3,485,960	+				-1.6
3,485,960	+				-0.3
3,486,030	-				-0.1
3,486,047	-				-0.7
3,486,160	+		Sama_2933	0.25	-0.6
3,486,161	-		Sama_2933	0.25	+0.1
3,486,161	-		Sama_2933	0.25	+0.3
3,486,201	-		Sama_2933	0.31	-0.8
3,486,201	-		Sama_2933	0.31	+0.4
3,486,268	+		Sama_2933	0.42	-0.0
3,486,269	-		Sama_2933	0.42	-0.3
3,486,288	-		Sama_2933	0.45	+0.8
3,486,288	-		Sama_2933	0.45	-0.4
3,486,293	+		Sama_2933	0.45	+0.3
3,486,326	+		Sama_2933	0.51	+0.8
3,486,357	+		Sama_2933	0.55	-1.0
3,486,357	+		Sama_2933	0.55	+0.6
3,486,357	+		Sama_2933	0.55	+0.7
3,486,357	+		Sama_2933	0.55	+1.5
3,486,358	-		Sama_2933	0.55	-0.0
3,486,358	-		Sama_2933	0.55	-0.3
3,486,358	-		Sama_2933	0.55	-1.4
3,486,358	-		Sama_2933	0.55	-0.5
3,486,358	-		Sama_2933	0.55	+0.0
3,486,358	-		Sama_2933	0.55	-0.5
3,486,360	+		Sama_2933	0.56	-1.4
3,486,360	+		Sama_2933	0.56	-1.6
3,486,360	+		Sama_2933	0.56	+0.2
3,486,361	-		Sama_2933	0.56	+0.2
3,486,361	-		Sama_2933	0.56	+0.5
3,486,361	-		Sama_2933	0.56	-0.7
3,486,378	+		Sama_2933	0.59	+0.9
3,486,379	-		Sama_2933	0.59	+0.2
3,486,433	-		Sama_2933	0.67	-0.7
3,486,441	+		Sama_2933	0.68	+0.5
3,486,441	+		Sama_2933	0.68	-0.3
3,486,441	+		Sama_2933	0.68	+1.2
3,486,441	+		Sama_2933	0.68	+0.1
3,486,441	+		Sama_2933	0.68	-0.6
3,486,442	-		Sama_2933	0.68	-0.4
3,486,442	-		Sama_2933	0.68	-1.7
3,486,442	-		Sama_2933	0.68	-0.6
3,486,442	-		Sama_2933	0.68	+1.5
3,486,442	-		Sama_2933	0.68	-0.5
3,486,445	+		Sama_2933	0.69	-0.8
3,486,445	+		Sama_2933	0.69	+0.4
3,486,445	+		Sama_2933	0.69	-0.3
3,486,445	+		Sama_2933	0.69	-0.1
3,486,445	+		Sama_2933	0.69	+0.2
3,486,445	+		Sama_2933	0.69	+0.9
3,486,445	+		Sama_2933	0.69	+0.9
3,486,446	-		Sama_2933	0.69	+0.2
3,486,446	-		Sama_2933	0.69	-1.6
3,486,446	-		Sama_2933	0.69	-0.6
3,486,446	-		Sama_2933	0.69	+1.0
3,486,446	-		Sama_2933	0.69	+2.3
3,486,446	-		Sama_2933	0.69	-1.4
3,486,446	-		Sama_2933	0.69	+0.6
3,486,446	-		Sama_2933	0.69	+0.2
3,486,446	-		Sama_2933	0.69	+0.9
3,486,446	-		Sama_2933	0.69	-0.2
3,486,446	-		Sama_2933	0.69	+1.1
3,486,446	-		Sama_2933	0.69	+0.7
3,486,446	-		Sama_2933	0.69	+1.9
3,486,446	-		Sama_2933	0.69	-0.9
3,486,645	+				+0.1
3,486,645	+				-0.8
3,486,645	+				-1.8
3,486,645	+				-0.1
3,486,645	+				-1.9
3,486,646	-				-0.6
3,486,646	-				+0.1
3,486,646	-				-0.7
3,486,646	-				-0.1
3,486,646	-				+1.0
3,486,649	+				-0.7
3,486,650	-				+1.4
3,486,679	+				+0.2
3,486,696	+				-0.8
3,486,696	+				-0.3
3,486,697	-				-0.8
3,486,697	-				-0.2
3,486,697	-				+0.7
3,486,729	-				-0.8
3,486,729	-				-0.6
3,486,729	-				-0.3
3,486,732	+				+0.1
3,486,732	+				-2.1
3,486,733	-				+0.3
3,486,733	-				+0.9
3,486,782	-				+0.3
3,486,806	+				-0.0
3,486,891	+		Sama_2934	0.11	-0.8
3,486,891	+		Sama_2934	0.11	-0.2
3,486,891	+		Sama_2934	0.11	-0.1
3,486,891	+		Sama_2934	0.11	+0.4
3,486,891	+		Sama_2934	0.11	-0.1
3,486,892	-		Sama_2934	0.11	-1.0
3,486,892	-		Sama_2934	0.11	+0.4
3,486,892	-		Sama_2934	0.11	-1.2
3,486,892	-		Sama_2934	0.11	-0.0
3,486,955	-		Sama_2934	0.20	-0.6
3,486,955	-		Sama_2934	0.20	+1.7
3,486,955	-		Sama_2934	0.20	-0.8
3,486,974	+		Sama_2934	0.22	+0.7
3,486,974	+		Sama_2934	0.22	-0.3
3,486,974	+		Sama_2934	0.22	-1.8
3,486,974	+		Sama_2934	0.22	+0.5
3,486,975	-		Sama_2934	0.22	-2.1
3,486,975	-		Sama_2934	0.22	+1.7
3,486,987	+		Sama_2934	0.24	-0.5
3,486,987	+		Sama_2934	0.24	-1.7
3,486,987	+		Sama_2934	0.24	-1.0
3,486,987	+		Sama_2934	0.24	+1.0
3,486,988	-		Sama_2934	0.24	+0.7
3,486,988	-		Sama_2934	0.24	+1.5
3,486,988	-		Sama_2934	0.24	-0.3
3,486,988	-		Sama_2934	0.24	-1.5
3,486,988	-		Sama_2934	0.24	-0.8
3,486,988	-		Sama_2934	0.24	+1.0
3,487,052	+		Sama_2934	0.33	-0.1
3,487,053	-		Sama_2934	0.33	-0.3
3,487,066	+		Sama_2934	0.35	-0.5
3,487,066	+		Sama_2934	0.35	-0.0
3,487,066	+		Sama_2934	0.35	-0.8
3,487,066	+		Sama_2934	0.35	-0.1
3,487,066	+		Sama_2934	0.35	+0.3
3,487,067	-		Sama_2934	0.35	-0.1
3,487,067	-		Sama_2934	0.35	-0.8
3,487,067	-		Sama_2934	0.35	-1.0
3,487,067	-		Sama_2934	0.35	-0.4
3,487,067	-		Sama_2934	0.35	-1.1
3,487,067	-		Sama_2934	0.35	-0.6
3,487,067	-		Sama_2934	0.35	+2.3
3,487,067	-		Sama_2934	0.35	+0.1
3,487,067	-		Sama_2934	0.35	+0.5
3,487,067	-		Sama_2934	0.35	-1.3
3,487,070	+		Sama_2934	0.35	-1.2
3,487,070	+		Sama_2934	0.35	+0.3
3,487,148	+		Sama_2934	0.46	-0.5
3,487,246	+		Sama_2934	0.59	-0.7
3,487,263	-		Sama_2934	0.61	-0.7
3,487,263	-		Sama_2934	0.61	+0.3
3,487,279	-		Sama_2934	0.63	-0.3
3,487,279	-		Sama_2934	0.63	-0.3
3,487,385	+		Sama_2934	0.77	+1.0
3,487,385	+		Sama_2934	0.77	+0.3
3,487,385	+		Sama_2934	0.77	-0.9
3,487,385	+		Sama_2934	0.77	+1.1
3,487,385	+		Sama_2934	0.77	+0.7
3,487,385	+		Sama_2934	0.77	+0.9
3,487,385	+		Sama_2934	0.77	-0.3
3,487,385	+		Sama_2934	0.77	-0.4
3,487,385	+		Sama_2934	0.77	+0.2
3,487,386	-		Sama_2934	0.78	-0.1
3,487,386	-		Sama_2934	0.78	+0.7
3,487,386	-		Sama_2934	0.78	-0.0
3,487,386	-		Sama_2934	0.78	+1.3
3,487,386	-		Sama_2934	0.78	-2.1
3,487,386	-		Sama_2934	0.78	-1.1
3,487,389	+		Sama_2934	0.78	-0.8
3,487,390	-		Sama_2934	0.78	+0.2
3,487,390	-		Sama_2934	0.78	+0.2
3,487,442	+		Sama_2934	0.85	+0.2
3,487,442	+		Sama_2934	0.85	-0.6
3,487,442	+		Sama_2934	0.85	+0.3
3,487,442	+		Sama_2934	0.85	+0.1
3,487,442	+		Sama_2934	0.85	-0.3
3,487,442	+		Sama_2934	0.85	-0.6
3,487,442	+		Sama_2934	0.85	-0.5
3,487,442	+		Sama_2934	0.85	-0.3
3,487,443	-		Sama_2934	0.85	+0.9
3,487,443	-		Sama_2934	0.85	+0.0
3,487,443	-		Sama_2934	0.85	-0.3
3,487,443	-		Sama_2934	0.85	+0.3
3,487,447	-		Sama_2934	0.86	-0.6
3,487,447	-		Sama_2934	0.86	-0.3
3,487,447	-		Sama_2934	0.86	-0.4
3,487,552	-				+0.4
3,487,552	-				+1.7
3,487,582	-				+0.0
3,487,582	-				+0.7
3,487,582	-				-1.1
3,487,670	-				-0.8
3,487,695	-				-1.1
3,487,739	+				-1.1
3,487,740	-				-2.4
3,487,740	-				-1.6
3,487,765	-				-0.8
3,487,780	+				-0.7
3,487,788	+				-1.3
3,487,788	+				+1.3
3,487,816	-				-0.2
3,487,828	-				+0.4
3,487,828	-				-1.8
3,487,828	-				-0.5
3,487,828	-				-1.3
3,487,828	-				+0.1
3,487,828	-				-0.4
3,487,923	+				+0.0
3,487,923	+				-1.4
3,487,923	+				-0.6
3,487,924	-				+0.2
3,488,030	+				-1.1
3,488,030	+				-3.1
3,488,030	+				-0.3
3,488,030	+				-0.8
3,488,030	+				-0.8
3,488,030	+				+0.6
3,488,030	+				-0.9
3,488,031	-				-0.8
3,488,031	-				-1.6
3,488,031	-				-0.0
3,488,063	+		Sama_2935	0.10	-0.3
3,488,063	+		Sama_2935	0.10	-0.3
3,488,063	+		Sama_2935	0.10	-0.4
3,488,064	-		Sama_2935	0.10	-0.3
3,488,064	-		Sama_2935	0.10	-1.5
3,488,064	-		Sama_2935	0.10	-1.8
3,488,064	-		Sama_2935	0.10	-0.5
3,488,079	+		Sama_2935	0.11	-0.3
3,488,079	+		Sama_2935	0.11	-1.5
3,488,079	+		Sama_2935	0.11	+0.5
3,488,080	-		Sama_2935	0.11	-0.6
3,488,080	-		Sama_2935	0.11	-0.3
3,488,086	+		Sama_2935	0.12	-0.8
3,488,100	+		Sama_2935	0.13	-0.8
3,488,101	-		Sama_2935	0.13	+0.3
3,488,134	-		Sama_2935	0.15	-0.6
3,488,134	-		Sama_2935	0.15	-0.5
3,488,134	-		Sama_2935	0.15	-1.1
3,488,145	+		Sama_2935	0.16	-0.1
3,488,145	+		Sama_2935	0.16	-0.6
3,488,145	+		Sama_2935	0.16	-0.8
3,488,145	+		Sama_2935	0.16	-1.3
3,488,145	+		Sama_2935	0.16	-2.1
3,488,145	+		Sama_2935	0.16	-0.8
3,488,146	-		Sama_2935	0.16	-0.8
3,488,149	+		Sama_2935	0.17	-0.6
3,488,149	+		Sama_2935	0.17	+0.2
3,488,150	-		Sama_2935	0.17	-0.4
3,488,150	-		Sama_2935	0.17	-0.2
3,488,150	-		Sama_2935	0.17	-0.6
3,488,150	-		Sama_2935	0.17	-1.2
3,488,150	-		Sama_2935	0.17	-1.6
3,488,180	-		Sama_2935	0.19	-1.3
3,488,202	-		Sama_2935	0.20	-1.8
3,488,281	+		Sama_2935	0.26	+0.3
3,488,281	+		Sama_2935	0.26	-0.1
3,488,282	-		Sama_2935	0.26	-0.5
3,488,282	-		Sama_2935	0.26	-2.4
3,488,329	+		Sama_2935	0.30	-0.6
3,488,329	+		Sama_2935	0.30	-1.2
3,488,347	+		Sama_2935	0.31	+0.3
3,488,347	+		Sama_2935	0.31	-0.6
3,488,347	+		Sama_2935	0.31	+0.1
3,488,347	+		Sama_2935	0.31	-1.3
3,488,364	+		Sama_2935	0.33	-0.6
3,488,365	-		Sama_2935	0.33	-0.8
3,488,365	-		Sama_2935	0.33	-1.0
3,488,365	-		Sama_2935	0.33	-0.7
3,488,365	-		Sama_2935	0.33	-0.8
3,488,365	-		Sama_2935	0.33	+1.3
3,488,365	-		Sama_2935	0.33	-1.8
3,488,365	-		Sama_2935	0.33	-0.1
3,488,455	-		Sama_2935	0.39	-0.7