Strain Fitness in Shewanella amazonensis SB2B around Sama_2691

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,218,675	+		Sama_2689	0.66	+0.5
3,218,675	+		Sama_2689	0.66	-0.6
3,218,675	+		Sama_2689	0.66	-0.1
3,218,676	-		Sama_2689	0.66	-0.3
3,218,797	+		Sama_2689	0.82	-0.5
3,218,797	+		Sama_2689	0.82	+0.4
3,218,797	+		Sama_2689	0.82	+0.2
3,218,797	+		Sama_2689	0.82	+0.6
3,218,798	-		Sama_2689	0.82	-1.0
3,218,798	-		Sama_2689	0.82	+0.6
3,218,798	-		Sama_2689	0.82	-1.7
3,218,798	-		Sama_2689	0.82	+0.2
3,218,798	-		Sama_2689	0.82	-0.4
3,218,798	-		Sama_2689	0.82	+0.5
3,218,798	-		Sama_2689	0.82	-3.1
3,218,798	-		Sama_2689	0.82	+0.9
3,218,798	-		Sama_2689	0.82	+0.0
3,218,798	-		Sama_2689	0.82	-0.2
3,218,815	+		Sama_2689	0.85	+0.4
3,218,815	+		Sama_2689	0.85	+1.4
3,218,816	-		Sama_2689	0.85	+0.2
3,218,823	+		Sama_2689	0.86	+0.6
3,218,928	+				+0.3
3,218,928	+				-0.4
3,218,929	-				+0.4
3,219,194	+		Sama_2690	0.31	-2.0
3,219,294	+		Sama_2690	0.48	-1.7
3,219,366	+		Sama_2690	0.61	-2.5
3,219,368	+		Sama_2690	0.61	-0.7
3,219,368	+		Sama_2690	0.61	-2.0
3,219,368	+		Sama_2690	0.61	-0.8
3,219,369	-		Sama_2690	0.62	-1.0
3,219,439	+		Sama_2690	0.74	-2.4
3,219,479	+		Sama_2690	0.81	-3.4
3,219,556	+				-2.5
3,219,577	+				-0.7
3,219,577	+				+0.4
3,219,577	+				+0.3
3,219,578	-				+0.1
3,219,584	+				+0.5
3,219,584	+				+0.0
3,219,632	+				-0.2
3,219,632	+				+0.8
3,219,633	-				+0.3
3,219,633	-				-1.0
3,219,633	-				+1.0
3,219,633	-				-0.8
3,219,639	+				+0.6
3,219,656	-				-0.5
3,219,656	-				-1.2
3,219,710	-		Sama_2691	0.25	-0.5
3,219,710	-		Sama_2691	0.25	-1.1
3,219,739	+		Sama_2691	0.35	-0.5
3,219,739	+		Sama_2691	0.35	+0.6
3,219,739	+		Sama_2691	0.35	+3.4
3,219,740	-		Sama_2691	0.35	-0.1
3,219,740	-		Sama_2691	0.35	+0.2
3,219,740	-		Sama_2691	0.35	-2.7
3,219,740	-		Sama_2691	0.35	+0.7
3,219,802	-		Sama_2691	0.57	-1.4
3,219,802	-		Sama_2691	0.57	-1.1
3,219,833	+		Sama_2691	0.68	-1.2
3,219,833	+		Sama_2691	0.68	-0.7
3,219,833	+		Sama_2691	0.68	-0.1
3,219,834	-		Sama_2691	0.68	+0.4
3,219,879	+		Sama_2691	0.84	+0.6
3,219,879	+		Sama_2691	0.84	-1.3
3,219,879	+		Sama_2691	0.84	-0.4
3,219,880	-		Sama_2691	0.85	-0.4
3,219,880	-		Sama_2691	0.85	-0.4
3,219,880	-		Sama_2691	0.85	-1.4
3,219,881	+		Sama_2691	0.85	-0.4
3,219,882	-		Sama_2691	0.85	-0.1
3,219,882	-		Sama_2691	0.85	-1.0
3,219,926	-				+1.5
3,219,949	+				-1.2
3,220,016	+				-2.0
3,220,017	-				+0.3
3,220,093	-				-0.4
3,220,098	+				-0.2
3,220,105	+				-0.4
3,220,105	+				-0.2
3,220,106	-				-0.0
3,220,177	+		Sama_2692	0.29	+0.4
3,220,177	+		Sama_2692	0.29	+0.6
3,220,177	+		Sama_2692	0.29	+0.2
3,220,177	+		Sama_2692	0.29	-1.8
3,220,177	+		Sama_2692	0.29	+1.6
3,220,177	+		Sama_2692	0.29	-0.5
3,220,177	+		Sama_2692	0.29	-1.7
3,220,177	+		Sama_2692	0.29	+0.5
3,220,177	+		Sama_2692	0.29	-1.4
3,220,178	-		Sama_2692	0.29	+1.6
3,220,178	-		Sama_2692	0.29	+0.4
3,220,178	-		Sama_2692	0.29	-1.7
3,220,178	-		Sama_2692	0.29	+0.2
3,220,178	-		Sama_2692	0.29	-0.2
3,220,206	+		Sama_2692	0.38	+0.0
3,220,206	+		Sama_2692	0.38	-0.1
3,220,206	+		Sama_2692	0.38	-0.3
3,220,206	+		Sama_2692	0.38	-0.3
3,220,206	+		Sama_2692	0.38	+0.6
3,220,207	-		Sama_2692	0.38	+0.1
3,220,207	-		Sama_2692	0.38	+0.6
3,220,207	-		Sama_2692	0.38	-0.4
3,220,207	-		Sama_2692	0.38	+0.2
3,220,207	-		Sama_2692	0.38	+0.1
3,220,210	+		Sama_2692	0.39	+0.2
3,220,210	+		Sama_2692	0.39	-0.7
3,220,211	-		Sama_2692	0.39	+0.1
3,220,211	-		Sama_2692	0.39	+0.4
3,220,211	-		Sama_2692	0.39	-1.8
3,220,211	-		Sama_2692	0.39	+1.1
3,220,211	-		Sama_2692	0.39	-0.9
3,220,237	-		Sama_2692	0.47	-1.2
3,220,244	+		Sama_2692	0.49	+0.6
3,220,245	-		Sama_2692	0.50	-1.4
3,220,245	-		Sama_2692	0.50	-1.4
3,220,245	-		Sama_2692	0.50	+0.0
3,220,315	-		Sama_2692	0.71	-0.1
3,220,315	-		Sama_2692	0.71	+0.6
3,220,345	+		Sama_2692	0.80	+0.6
3,220,355	+		Sama_2692	0.83	+0.6
3,220,356	-		Sama_2692	0.83	+0.6
3,220,356	-		Sama_2692	0.83	+0.3
3,220,356	-		Sama_2692	0.83	+0.0
3,220,366	+		Sama_2692	0.86	-0.2
3,220,367	-		Sama_2692	0.87	-0.7
3,220,379	-				+0.2
3,220,386	+				+0.8
3,220,386	+				+0.6
3,220,387	-				-0.1
3,220,387	-				+0.3
3,220,387	-				+1.6
3,220,387	-				-1.0
3,220,387	-				+0.1
3,220,387	-				-1.0
3,220,387	-				+0.6
3,220,387	-				-0.2
3,220,416	-				-0.9
3,220,486	+				+0.6
3,220,492	+				+0.7
3,220,492	+				+0.5
3,220,493	-				+0.1
3,220,551	-				-1.7
3,220,558	+				+1.6
3,220,559	-				+0.4
3,220,653	+		Sama_2693	0.14	-3.5
3,220,653	+		Sama_2693	0.14	+0.6
3,220,689	+		Sama_2693	0.18	-0.8
3,220,784	+		Sama_2693	0.30	-0.3
3,220,784	+		Sama_2693	0.30	-0.4
3,220,785	-		Sama_2693	0.30	+0.6
3,220,873	+		Sama_2693	0.42	-1.4
3,220,873	+		Sama_2693	0.42	-0.2
3,220,873	+		Sama_2693	0.42	+0.0
3,220,873	+		Sama_2693	0.42	+0.8
3,220,873	+		Sama_2693	0.42	+0.6
3,220,873	+		Sama_2693	0.42	-0.7
3,220,873	+		Sama_2693	0.42	+1.8
3,220,873	+		Sama_2693	0.42	-0.4
3,220,873	+		Sama_2693	0.42	-1.7
3,220,873	+		Sama_2693	0.42	-0.3
3,220,873	+		Sama_2693	0.42	+0.3
3,220,873	+		Sama_2693	0.42	+0.6
3,220,873	+		Sama_2693	0.42	+0.6
3,220,873	+		Sama_2693	0.42	+0.1
3,220,873	+		Sama_2693	0.42	+0.2
3,220,873	+		Sama_2693	0.42	-1.0
3,220,874	-		Sama_2693	0.42	-0.6
3,220,874	-		Sama_2693	0.42	+0.4
3,220,874	-		Sama_2693	0.42	-2.7
3,220,874	-		Sama_2693	0.42	-0.4
3,220,874	-		Sama_2693	0.42	+0.4
3,220,874	-		Sama_2693	0.42	+1.3
3,220,874	-		Sama_2693	0.42	-1.4
3,220,874	-		Sama_2693	0.42	+1.6
3,220,874	-		Sama_2693	0.42	+0.4
3,220,874	-		Sama_2693	0.42	-1.5