Strain Fitness in Shewanella amazonensis SB2B around Sama_2427

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,921,096	-		Sama_2426	0.18	+0.4
2,921,118	+		Sama_2426	0.20	-1.7
2,921,119	-		Sama_2426	0.20	-2.0
2,921,166	-		Sama_2426	0.24	+0.6
2,921,176	-		Sama_2426	0.25	-0.3
2,921,176	-		Sama_2426	0.25	+0.4
2,921,176	-		Sama_2426	0.25	-0.6
2,921,176	-		Sama_2426	0.25	+1.9
2,921,176	-		Sama_2426	0.25	+0.2
2,921,180	-		Sama_2426	0.26	-0.5
2,921,311	-		Sama_2426	0.38	-0.8
2,921,311	-		Sama_2426	0.38	+1.2
2,921,392	+		Sama_2426	0.45	-0.3
2,921,402	-		Sama_2426	0.46	+0.6
2,921,474	-		Sama_2426	0.53	-0.1
2,921,550	-		Sama_2426	0.60	+0.6
2,921,663	-		Sama_2426	0.70	-1.4
2,921,663	-		Sama_2426	0.70	-0.8
2,921,663	-		Sama_2426	0.70	+0.3
2,921,722	+		Sama_2426	0.76	+1.3
2,921,728	+		Sama_2426	0.76	-1.7
2,921,729	-		Sama_2426	0.76	+0.3
2,921,858	+		Sama_2426	0.88	+0.6
2,921,859	-		Sama_2426	0.88	-2.0
2,921,865	+		Sama_2426	0.89	-0.4
2,921,865	+		Sama_2426	0.89	-0.2
2,921,865	+		Sama_2426	0.89	-0.4
2,921,865	+		Sama_2426	0.89	-0.5
2,921,865	+		Sama_2426	0.89	+0.6
2,921,865	+		Sama_2426	0.89	-0.2
2,921,865	+		Sama_2426	0.89	+0.6
2,921,865	+		Sama_2426	0.89	+0.8
2,921,866	-		Sama_2426	0.89	-0.1
2,921,866	-		Sama_2426	0.89	-1.7
2,921,866	-		Sama_2426	0.89	+0.6
2,921,866	-		Sama_2426	0.89	-0.6
2,921,866	-		Sama_2426	0.89	-0.3
2,921,866	-		Sama_2426	0.89	+0.5
2,921,967	+				-1.3
2,921,967	+				-1.1
2,921,967	+				-0.2
2,921,967	+				+1.2
2,921,967	+				+0.1
2,921,967	+				-0.7
2,921,967	+				-1.6
2,921,968	-				+0.1
2,921,969	+				-1.0
2,921,969	+				-0.2
2,921,969	+				-1.6
2,921,969	+				-0.2
2,921,969	+				-0.0
2,921,969	+				-1.6
2,921,970	-				-0.0
2,921,970	-				+0.3
2,921,970	-				+1.2
2,921,970	-				-0.1
2,921,970	-				+1.0
2,921,970	-				+1.0
2,921,970	-				-0.3
2,922,011	+				-0.7
2,922,011	+				-2.2
2,922,011	+				+0.6
2,922,011	+				+0.4
2,922,012	-				+0.3
2,922,012	-				+1.2
2,922,053	+				-1.0
2,922,053	+				-1.0
2,922,054	-				+1.1
2,922,054	-				+0.8
2,922,054	-				+0.1
2,922,055	+				-2.9
2,922,055	+				+0.3
2,922,056	-				-0.3
2,922,056	-				+0.8
2,922,080	+				-0.7
2,922,081	-				-0.4
2,922,206	+		Sama_2427	0.33	-1.2
2,922,206	+		Sama_2427	0.33	-1.0
2,922,206	+		Sama_2427	0.33	-0.4
2,922,207	-		Sama_2427	0.33	-1.6
2,922,207	-		Sama_2427	0.33	-1.0
2,922,241	-		Sama_2427	0.42	+1.4
2,922,265	+		Sama_2427	0.48	+0.3
2,922,280	-		Sama_2427	0.52	+0.6
2,922,324	-		Sama_2427	0.63	-1.1
2,922,459	+				+0.6
2,922,460	-				+0.8
2,922,460	-				+0.1
2,922,506	+				-1.0
2,922,506	+				-0.7
2,922,506	+				+1.0
2,922,507	-				+0.5
2,922,526	+				-1.2
2,922,526	+				-0.5
2,922,656	+		Sama_2428	0.29	+0.3
2,922,656	+		Sama_2428	0.29	-1.0
2,922,656	+		Sama_2428	0.29	-1.4
2,922,679	+		Sama_2428	0.32	-0.7
2,922,679	+		Sama_2428	0.32	+0.2
2,922,811	+		Sama_2428	0.52	+0.6
2,922,811	+		Sama_2428	0.52	-0.7
2,922,812	-		Sama_2428	0.52	+0.6
2,922,812	-		Sama_2428	0.52	-1.0
2,922,812	-		Sama_2428	0.52	+0.3
2,922,838	+		Sama_2428	0.56	-0.2
2,922,840	+		Sama_2428	0.56	+0.6
2,922,840	+		Sama_2428	0.56	+0.2
2,922,841	-		Sama_2428	0.56	-0.2
2,922,854	+		Sama_2428	0.58	-1.2
2,922,854	+		Sama_2428	0.58	+0.2
2,922,854	+		Sama_2428	0.58	+0.0
2,922,855	-		Sama_2428	0.58	-0.4
2,922,855	-		Sama_2428	0.58	+0.2
2,922,855	-		Sama_2428	0.58	+0.2
2,922,916	+		Sama_2428	0.67	-0.1
2,922,940	+		Sama_2428	0.70	+1.4
2,922,940	+		Sama_2428	0.70	+1.0
2,922,940	+		Sama_2428	0.70	-0.4
2,922,940	+		Sama_2428	0.70	+0.6
2,922,940	+		Sama_2428	0.70	-0.3
2,922,941	-		Sama_2428	0.71	-0.0
2,922,941	-		Sama_2428	0.71	+0.7
2,922,941	-		Sama_2428	0.71	-0.0
2,922,942	+		Sama_2428	0.71	-0.1
2,922,942	+		Sama_2428	0.71	+0.7
2,922,942	+		Sama_2428	0.71	+0.3
2,922,943	-		Sama_2428	0.71	+0.8
2,922,943	-		Sama_2428	0.71	+0.8
2,922,952	+		Sama_2428	0.72	+0.6
2,923,022	-		Sama_2428	0.82	-0.7
2,923,232	-		Sama_2429	0.12	-1.0
2,923,235	-		Sama_2429	0.12	+0.9
2,923,235	-		Sama_2429	0.12	-0.5
2,923,356	+		Sama_2429	0.26	+0.3
2,923,357	-		Sama_2429	0.26	+0.6
2,923,357	-		Sama_2429	0.26	+0.2
2,923,398	+		Sama_2429	0.30	+0.6
2,923,399	-		Sama_2429	0.30	+0.2
2,923,399	-		Sama_2429	0.30	+0.3
2,923,399	-		Sama_2429	0.30	-0.6
2,923,408	-		Sama_2429	0.31	-1.0