Strain Fitness in Shewanella amazonensis SB2B around Sama_1686

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,059,537	-				-0.2
2,059,537	-				+0.4
2,059,537	-				-1.2
2,059,539	-				+0.4
2,059,539	-				-1.4
2,059,577	-				-0.2
2,059,590	+				-0.0
2,059,660	+				+1.2
2,059,748	-		Sama_1685	0.34	-0.9
2,059,752	+		Sama_1685	0.35	-1.6
2,059,783	+		Sama_1685	0.44	-0.8
2,059,784	-		Sama_1685	0.44	+0.8
2,059,865	+		Sama_1685	0.68	-0.9
2,059,866	-		Sama_1685	0.69	-2.8
2,059,872	+		Sama_1685	0.71	-0.6
2,059,872	+		Sama_1685	0.71	+1.4
2,059,873	-		Sama_1685	0.71	-1.6
2,059,911	-		Sama_1685	0.82	-0.6
2,059,950	+				+2.0
2,059,950	+				-0.2
2,059,951	-				+1.0
2,059,951	-				-0.2
2,059,953	-				+1.7
2,059,953	-				+0.3
2,059,968	+				+0.7
2,059,986	+				+0.4
2,060,031	+				-0.6
2,060,048	-				+0.4
2,060,082	+				+0.8
2,060,088	+				-0.8
2,060,089	-				+0.4
2,060,114	+		Sama_1686	0.11	+1.7
2,060,114	+		Sama_1686	0.11	+0.4
2,060,136	-		Sama_1686	0.15	+0.7
2,060,136	-		Sama_1686	0.15	-0.8
2,060,140	-		Sama_1686	0.15	+0.9
2,060,140	-		Sama_1686	0.15	-0.4
2,060,149	+		Sama_1686	0.17	-0.0
2,060,149	+		Sama_1686	0.17	-1.6
2,060,149	+		Sama_1686	0.17	+2.4
2,060,149	+		Sama_1686	0.17	-0.6
2,060,150	-		Sama_1686	0.17	-1.0
2,060,150	-		Sama_1686	0.17	+0.4
2,060,150	-		Sama_1686	0.17	-0.8
2,060,150	-		Sama_1686	0.17	+0.4
2,060,150	-		Sama_1686	0.17	-2.2
2,060,150	-		Sama_1686	0.17	-0.6
2,060,153	+		Sama_1686	0.18	+1.4
2,060,153	+		Sama_1686	0.18	-1.2
2,060,153	+		Sama_1686	0.18	+0.9
2,060,154	-		Sama_1686	0.18	-1.2
2,060,396	+		Sama_1686	0.57	+1.2
2,060,396	+		Sama_1686	0.57	+0.1
2,060,397	-		Sama_1686	0.58	-0.9
2,060,397	-		Sama_1686	0.58	-1.0
2,060,409	-		Sama_1686	0.60	+0.0
2,060,424	+		Sama_1686	0.62	-0.4
2,060,532	+		Sama_1686	0.80	+2.3
2,060,533	-		Sama_1686	0.80	+0.8
2,060,574	+		Sama_1686	0.87	-1.2
2,060,574	+		Sama_1686	0.87	-0.0
2,060,575	-		Sama_1686	0.87	-1.2
2,060,627	+				-0.6
2,060,627	+				-1.6
2,060,655	-				-1.6
2,060,662	+				+0.8
2,060,662	+				-2.8
2,060,663	-				+2.4
2,060,663	-				-1.0
2,060,663	-				+0.0
2,060,682	+				-0.8
2,060,688	-				-0.6
2,060,688	-				-1.4
2,060,767	+				+1.2
2,060,768	-				+0.0
2,060,813	+		Sama_1687	0.11	+0.0
2,060,819	+		Sama_1687	0.11	+0.2
2,060,819	+		Sama_1687	0.11	+0.4
2,060,820	-		Sama_1687	0.11	+0.0
2,060,822	+		Sama_1687	0.11	+0.8
2,060,837	+		Sama_1687	0.12	-0.4
2,060,837	+		Sama_1687	0.12	+1.2
2,060,837	+		Sama_1687	0.12	+1.0
2,060,838	-		Sama_1687	0.12	+1.0
2,060,838	-		Sama_1687	0.12	-0.7
2,060,858	-		Sama_1687	0.14	-0.3
2,060,892	-		Sama_1687	0.16	+0.4
2,060,928	-		Sama_1687	0.19	-0.8
2,060,999	+		Sama_1687	0.24	+1.3
2,061,000	-		Sama_1687	0.24	+0.2
2,061,209	+		Sama_1687	0.39	-0.3
2,061,209	+		Sama_1687	0.39	+0.3
2,061,210	-		Sama_1687	0.39	-3.0
2,061,338	-		Sama_1687	0.48	-2.6
2,061,361	+		Sama_1687	0.49	-0.2
2,061,397	+		Sama_1687	0.52	-0.3
2,061,398	-		Sama_1687	0.52	+1.4
2,061,418	+		Sama_1687	0.53	+0.2
2,061,474	-		Sama_1687	0.57	-1.1
2,061,503	+		Sama_1687	0.59	-0.2
2,061,584	-		Sama_1687	0.65	-1.9
2,061,588	+		Sama_1687	0.65	-1.3
2,061,589	-		Sama_1687	0.66	-0.6
2,061,614	-		Sama_1687	0.67	+0.1
2,061,648	-		Sama_1687	0.70	+0.6