Strain Fitness in Shewanella amazonensis SB2B around Sama_1324

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,612,052	-		Sama_1323	0.22	+0.3
1,612,104	+		Sama_1323	0.28	+0.5
1,612,105	-		Sama_1323	0.29	-1.5
1,612,105	-		Sama_1323	0.29	-0.3
1,612,117	-		Sama_1323	0.30	+1.1
1,612,117	-		Sama_1323	0.30	-2.8
1,612,159	+		Sama_1323	0.36	-1.5
1,612,214	+		Sama_1323	0.43	-1.4
1,612,214	+		Sama_1323	0.43	-0.2
1,612,215	-		Sama_1323	0.43	+0.5
1,612,215	-		Sama_1323	0.43	+0.5
1,612,215	-		Sama_1323	0.43	+0.7
1,612,225	+		Sama_1323	0.44	+1.3
1,612,225	+		Sama_1323	0.44	-2.1
1,612,252	+		Sama_1323	0.48	-0.7
1,612,329	-		Sama_1323	0.57	-1.1
1,612,376	+		Sama_1323	0.64	-0.1
1,612,377	-		Sama_1323	0.64	-0.1
1,612,377	-		Sama_1323	0.64	+0.5
1,612,492	+		Sama_1323	0.79	-0.5
1,612,492	+		Sama_1323	0.79	-0.7
1,612,493	-		Sama_1323	0.79	+0.5
1,612,493	-		Sama_1323	0.79	-1.8
1,612,526	+		Sama_1323	0.83	+0.3
1,612,555	+		Sama_1323	0.87	-1.2
1,612,653	-				+0.8
1,612,653	-				-2.0
1,612,657	+				-1.0
1,612,657	+				+1.7
1,612,658	-				+1.2
1,612,658	-				+2.1
1,612,658	-				+0.5
1,612,658	-				+1.9
1,612,658	-				+0.2
1,612,658	-				+0.4
1,612,658	-				-0.1
1,612,693	-				-1.2
1,612,697	+				+0.5
1,612,698	-				-0.2
1,612,710	+				+0.9
1,612,710	+				-2.1
1,612,711	-				+1.1
1,612,711	-				-0.7
1,612,711	-				+0.2
1,612,715	+				-1.5
1,612,715	+				-0.6
1,612,715	+				+0.1
1,612,715	+				-0.7
1,612,716	-				+0.2
1,612,716	-				-1.8
1,612,716	-				+0.4
1,612,716	-				+0.7
1,612,716	-				+0.9
1,612,716	-				-0.1
1,612,716	-				+0.3
1,612,716	-				-0.1
1,612,716	-				-0.5
1,612,716	-				+0.3
1,612,716	-				+0.9
1,612,716	-				+0.2
1,612,716	-				+2.3
1,612,716	-				+0.2
1,612,719	+				+0.5
1,612,719	+				-0.1
1,612,719	+				-0.5
1,612,719	+				-1.2
1,612,720	-				+1.0
1,612,720	-				+2.5
1,612,720	-				+0.2
1,612,720	-				-1.5
1,612,720	-				+0.8
1,612,774	-				-0.5
1,612,802	+				-0.1
1,612,803	-				+0.5
1,612,805	+				-0.5
1,612,805	+				-0.3
1,612,820	+				+0.2
1,612,824	+				-0.4
1,612,834	-				+0.5
1,612,834	-				-3.0
1,613,837	+				-0.2
1,613,838	-				-0.5
1,613,838	-				-0.3
1,613,896	-				-0.3
1,613,909	+				-0.3
1,613,910	-				+0.1
1,613,920	+				-0.3
1,613,921	-				-0.8
1,613,921	-				-0.1
1,613,926	-				+0.1
1,613,961	+				-0.3
1,613,962	-				-1.8
1,613,998	-				-0.5
1,614,002	-				-1.3
1,614,021	+				-0.5
1,614,021	+				-1.8
1,614,021	+				-2.8
1,614,021	+				-1.1
1,614,022	-				-2.1
1,614,157	-		Sama_1325	0.18	-0.7
1,614,280	-		Sama_1325	0.27	+0.7
1,614,280	-		Sama_1325	0.27	-3.0
1,614,296	+		Sama_1325	0.28	-1.1
1,614,330	-		Sama_1325	0.31	-1.4
1,614,330	-		Sama_1325	0.31	-0.3
1,614,330	-		Sama_1325	0.31	-2.3
1,614,377	+		Sama_1325	0.34	-2.1
1,614,385	+		Sama_1325	0.35	-2.5
1,614,396	+		Sama_1325	0.35	-2.8
1,614,397	-		Sama_1325	0.36	-2.1
1,614,397	-		Sama_1325	0.36	-1.3
1,614,397	-		Sama_1325	0.36	-1.5
1,614,399	+		Sama_1325	0.36	-1.5
1,614,482	-		Sama_1325	0.42	-0.5
1,614,542	+		Sama_1325	0.46	-1.5
1,614,570	+		Sama_1325	0.48	-1.5
1,614,571	-		Sama_1325	0.48	-1.1
1,614,571	-		Sama_1325	0.48	-1.3
1,614,603	-		Sama_1325	0.50	-1.3
1,614,603	-		Sama_1325	0.50	-1.1
1,614,640	-		Sama_1325	0.53	-1.7
1,614,742	+		Sama_1325	0.61	-0.5
1,614,742	+		Sama_1325	0.61	-0.5
1,614,743	-		Sama_1325	0.61	+0.5
1,614,743	-		Sama_1325	0.61	-1.8
1,614,767	+		Sama_1325	0.62	-1.7
1,614,847	+		Sama_1325	0.68	-1.8
1,614,847	+		Sama_1325	0.68	-0.8
1,614,847	+		Sama_1325	0.68	+0.5