Strain Fitness in Marinobacter adhaerens HP15 around HP15_4167

Experiment: m.b. 25C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntHP15_4165 and HP15_4166 are separated by 200 nucleotidesHP15_4166 and HP15_4167 are separated by 314 nucleotidesHP15_4167 and HP15_4168 are separated by 598 nucleotides HP15_4165: HP15_4165 - protein containing methyltransferase type 11 domain, at 4,402,060 to 4,403,154 _4165 HP15_4166: HP15_4166 - conserved hypothetical protein, at 4,403,355 to 4,403,768 _4166 HP15_4167: HP15_4167 - conserved hypothetical protein, at 4,404,083 to 4,404,550 _4167 HP15_4168: HP15_4168 - hypothetical protein, at 4,405,149 to 4,405,256 _4168 Position (kb) 4404 4405Strain fitness (log2 ratio) -2 -1 0 1 2at 4403.116 kb on - strandat 4403.205 kb on + strandat 4403.224 kb on + strandat 4403.232 kb on - strandat 4403.245 kb on + strandat 4403.246 kb on - strandat 4403.250 kb on + strandat 4403.250 kb on + strandat 4403.255 kb on + strandat 4403.258 kb on - strandat 4403.261 kb on + strandat 4403.364 kb on + strandat 4403.457 kb on + strand, within HP15_4166at 4403.489 kb on + strand, within HP15_4166at 4403.518 kb on + strand, within HP15_4166at 4403.523 kb on + strand, within HP15_4166at 4403.543 kb on + strand, within HP15_4166at 4403.572 kb on + strand, within HP15_4166at 4403.646 kb on - strand, within HP15_4166at 4403.646 kb on - strand, within HP15_4166at 4403.646 kb on - strand, within HP15_4166at 4403.658 kb on + strand, within HP15_4166at 4403.717 kb on + strand, within HP15_4166at 4403.717 kb on + strand, within HP15_4166at 4403.725 kb on - strand, within HP15_4166at 4403.725 kb on - strand, within HP15_4166at 4403.730 kb on - strandat 4403.734 kb on + strandat 4403.734 kb on + strandat 4403.742 kb on - strandat 4403.816 kb on - strandat 4403.915 kb on + strandat 4404.063 kb on + strandat 4404.063 kb on + strandat 4404.071 kb on - strandat 4404.094 kb on + strandat 4404.094 kb on + strandat 4404.102 kb on - strandat 4404.175 kb on - strand, within HP15_4167at 4404.311 kb on + strand, within HP15_4167at 4404.325 kb on + strand, within HP15_4167at 4404.333 kb on - strand, within HP15_4167at 4404.333 kb on - strand, within HP15_4167at 4404.334 kb on + strand, within HP15_4167at 4404.349 kb on - strand, within HP15_4167at 4404.375 kb on - strand, within HP15_4167at 4404.474 kb on - strand, within HP15_4167at 4404.481 kb on + strand, within HP15_4167at 4404.669 kb on + strandat 4404.669 kb on + strandat 4404.686 kb on + strandat 4404.686 kb on + strandat 4404.691 kb on + strandat 4404.767 kb on + strandat 4404.767 kb on + strandat 4404.770 kb on - strandat 4404.816 kb on - strandat 4404.905 kb on + strandat 4404.976 kb on + strandat 4405.136 kb on - strandat 4405.138 kb on + strandat 4405.191 kb on - strand, within HP15_4168at 4405.195 kb on + strand, within HP15_4168at 4405.203 kb on - strand, within HP15_4168at 4405.207 kb on + strand, within HP15_4168at 4405.287 kb on + strandat 4405.287 kb on + strandat 4405.287 kb on + strandat 4405.295 kb on - strandat 4405.295 kb on - strandat 4405.295 kb on - strandat 4405.314 kb on + strandat 4405.427 kb on + strandat 4405.435 kb on - strandat 4405.445 kb on - strandat 4405.456 kb on - strandat 4405.462 kb on + strandat 4405.492 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. 25C
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4,403,116 - -0.3
4,403,205 + +0.4
4,403,224 + +1.4
4,403,232 - -0.4
4,403,245 + -0.2
4,403,246 - +1.8
4,403,250 + +0.0
4,403,250 + +0.2
4,403,255 + -0.3
4,403,258 - +0.9
4,403,261 + -0.4
4,403,364 + +0.9
4,403,457 + HP15_4166 0.25 -0.1
4,403,489 + HP15_4166 0.32 +0.3
4,403,518 + HP15_4166 0.39 -1.7
4,403,523 + HP15_4166 0.41 -1.6
4,403,543 + HP15_4166 0.45 +1.3
4,403,572 + HP15_4166 0.52 -0.4
4,403,646 - HP15_4166 0.70 -0.5
4,403,646 - HP15_4166 0.70 -2.5
4,403,646 - HP15_4166 0.70 -0.3
4,403,658 + HP15_4166 0.73 +1.0
4,403,717 + HP15_4166 0.87 +0.3
4,403,717 + HP15_4166 0.87 +0.4
4,403,725 - HP15_4166 0.89 +0.6
4,403,725 - HP15_4166 0.89 +0.5
4,403,730 - -0.4
4,403,734 + +0.9
4,403,734 + -0.0
4,403,742 - -0.1
4,403,816 - -0.2
4,403,915 + +0.4
4,404,063 + -0.3
4,404,063 + -0.2
4,404,071 - -0.2
4,404,094 + -0.4
4,404,094 + +0.5
4,404,102 - +0.1
4,404,175 - HP15_4167 0.20 +0.7
4,404,311 + HP15_4167 0.49 +2.0
4,404,325 + HP15_4167 0.52 +0.3
4,404,333 - HP15_4167 0.53 -0.3
4,404,333 - HP15_4167 0.53 -0.4
4,404,334 + HP15_4167 0.54 +0.3
4,404,349 - HP15_4167 0.57 +0.3
4,404,375 - HP15_4167 0.62 +0.7
4,404,474 - HP15_4167 0.84 -0.4
4,404,481 + HP15_4167 0.85 -0.1
4,404,669 + +0.0
4,404,669 + -0.1
4,404,686 + -0.7
4,404,686 + +0.8
4,404,691 + -0.1
4,404,767 + -0.1
4,404,767 + +1.8
4,404,770 - -0.5
4,404,816 - -1.0
4,404,905 + +0.4
4,404,976 + +0.7
4,405,136 - -0.4
4,405,138 + +0.1
4,405,191 - HP15_4168 0.39 +0.0
4,405,195 + HP15_4168 0.43 +0.1
4,405,203 - HP15_4168 0.50 +0.6
4,405,207 + HP15_4168 0.54 +0.6
4,405,287 + +0.0
4,405,287 + +0.1
4,405,287 + -0.5
4,405,295 - +0.8
4,405,295 - +0.7
4,405,295 - +0.1
4,405,314 + -0.2
4,405,427 + +1.8
4,405,435 - -0.5
4,405,445 - -1.1
4,405,456 - +0.3
4,405,462 + -0.7
4,405,492 + -0.1

Or see this region's nucleotide sequence