Experiment: m.b. 25C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_3144 and HP15_3145 are separated by 15 nucleotides HP15_3145 and HP15_3148 are separated by 209 nucleotides HP15_3148 and HP15_3146 are separated by 0 nucleotides HP15_3146 and HP15_3147 are separated by 12 nucleotides
HP15_3144: HP15_3144 - Aldehyde dehydrogenase (EC 1.2.1.3) <small>(from data)</small>, at 3,296,646 to 3,298,247
_3144
HP15_3145: HP15_3145 - hypothetical protein, at 3,298,263 to 3,298,442
_3145
HP15_3148: HP15_3148 - hypothetical protein, at 3,298,652 to 3,298,786
_3148
HP15_3146: HP15_3146 - urea carboxylase-associated protein 2, at 3,298,787 to 3,299,431
_3146
HP15_3147: HP15_3147 - urea carboxylase-associated protein 1, at 3,299,444 to 3,300,082
_3147
Position (kb) 3298
3299 Strain fitness (log2 ratio) -1
0
1 at 3297.841 kb on + strand, within HP15_3144 at 3297.841 kb on + strand, within HP15_3144 at 3297.841 kb on + strand, within HP15_3144 at 3297.943 kb on + strand, within HP15_3144 at 3297.951 kb on - strand, within HP15_3144 at 3297.998 kb on + strand, within HP15_3144 at 3298.054 kb on - strand, within HP15_3144 at 3298.168 kb on + strand at 3298.178 kb on + strand at 3298.187 kb on - strand at 3298.231 kb on - strand at 3298.231 kb on - strand at 3298.538 kb on - strand at 3298.616 kb on + strand at 3298.673 kb on - strand, within HP15_3148 at 3298.727 kb on + strand, within HP15_3148 at 3298.764 kb on + strand, within HP15_3148 at 3298.777 kb on + strand at 3298.790 kb on - strand at 3298.837 kb on + strand at 3298.900 kb on - strand, within HP15_3146 at 3298.917 kb on - strand, within HP15_3146 at 3298.919 kb on - strand, within HP15_3146 at 3298.940 kb on + strand, within HP15_3146 at 3298.997 kb on + strand, within HP15_3146 at 3299.086 kb on - strand, within HP15_3146 at 3299.108 kb on - strand, within HP15_3146 at 3299.132 kb on - strand, within HP15_3146 at 3299.142 kb on + strand, within HP15_3146 at 3299.149 kb on - strand, within HP15_3146 at 3299.161 kb on + strand, within HP15_3146 at 3299.184 kb on + strand, within HP15_3146 at 3299.209 kb on - strand, within HP15_3146 at 3299.258 kb on + strand, within HP15_3146 at 3299.258 kb on + strand, within HP15_3146 at 3299.268 kb on - strand, within HP15_3146 at 3299.276 kb on + strand, within HP15_3146 at 3299.408 kb on + strand at 3299.421 kb on - strand at 3299.541 kb on + strand, within HP15_3147 at 3299.593 kb on - strand, within HP15_3147 at 3299.647 kb on + strand, within HP15_3147 at 3299.670 kb on + strand, within HP15_3147 at 3299.678 kb on - strand, within HP15_3147 at 3299.678 kb on - strand, within HP15_3147 at 3299.678 kb on - strand, within HP15_3147 at 3299.713 kb on - strand, within HP15_3147 at 3299.730 kb on - strand, within HP15_3147 at 3299.762 kb on + strand, within HP15_3147 at 3299.762 kb on + strand, within HP15_3147
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 25C remove 3,297,841 + HP15_3144 0.75 -0.3 3,297,841 + HP15_3144 0.75 -0.4 3,297,841 + HP15_3144 0.75 -0.2 3,297,943 + HP15_3144 0.81 -0.1 3,297,951 - HP15_3144 0.81 +0.7 3,297,998 + HP15_3144 0.84 +1.0 3,298,054 - HP15_3144 0.88 +0.6 3,298,168 + +0.0 3,298,178 + +0.3 3,298,187 - -0.0 3,298,231 - +0.0 3,298,231 - -0.1 3,298,538 - +0.6 3,298,616 + +0.0 3,298,673 - HP15_3148 0.16 -0.4 3,298,727 + HP15_3148 0.56 +0.1 3,298,764 + HP15_3148 0.83 +0.2 3,298,777 + -0.1 3,298,790 - -0.1 3,298,837 + +0.5 3,298,900 - HP15_3146 0.18 +0.9 3,298,917 - HP15_3146 0.20 -0.9 3,298,919 - HP15_3146 0.20 -0.5 3,298,940 + HP15_3146 0.24 +0.1 3,298,997 + HP15_3146 0.33 -0.1 3,299,086 - HP15_3146 0.46 -0.3 3,299,108 - HP15_3146 0.50 +0.7 3,299,132 - HP15_3146 0.53 -0.2 3,299,142 + HP15_3146 0.55 -0.7 3,299,149 - HP15_3146 0.56 -0.1 3,299,161 + HP15_3146 0.58 +0.9 3,299,184 + HP15_3146 0.62 +0.1 3,299,209 - HP15_3146 0.65 +0.3 3,299,258 + HP15_3146 0.73 -0.0 3,299,258 + HP15_3146 0.73 +0.2 3,299,268 - HP15_3146 0.75 +0.2 3,299,276 + HP15_3146 0.76 -0.3 3,299,408 + -0.4 3,299,421 - +0.8 3,299,541 + HP15_3147 0.15 +0.7 3,299,593 - HP15_3147 0.23 -0.6 3,299,647 + HP15_3147 0.32 -0.0 3,299,670 + HP15_3147 0.35 -0.3 3,299,678 - HP15_3147 0.37 +0.5 3,299,678 - HP15_3147 0.37 +0.8 3,299,678 - HP15_3147 0.37 -0.4 3,299,713 - HP15_3147 0.42 +0.0 3,299,730 - HP15_3147 0.45 +0.4 3,299,762 + HP15_3147 0.50 -1.4 3,299,762 + HP15_3147 0.50 +0.3
Or see this region's nucleotide sequence