Experiment: m.b. 25C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2567 and HP15_2568 are separated by 83 nucleotides HP15_2568 and HP15_2569 are separated by 13 nucleotides HP15_2569 and HP15_2570 are separated by 146 nucleotides
HP15_2567: HP15_2567 - uncharacterized conserved protein UCP028101, at 2,713,978 to 2,715,072
_2567
HP15_2568: HP15_2568 - permease of the major facilitator superfamily protein, at 2,715,156 to 2,716,469
_2568
HP15_2569: HP15_2569 - conserved hypothetical protein, membrane, at 2,716,483 to 2,716,770
_2569
HP15_2570: HP15_2570 - methyl-accepting chemotaxis sensory transducer, at 2,716,917 to 2,718,521
_2570
Position (kb)
2715
2716
2717 Strain fitness (log2 ratio)
-1
0
1
2 at 2714.186 kb on + strand, within HP15_2567 at 2714.194 kb on - strand, within HP15_2567 at 2714.246 kb on - strand, within HP15_2567 at 2714.271 kb on + strand, within HP15_2567 at 2714.271 kb on + strand, within HP15_2567 at 2714.271 kb on + strand, within HP15_2567 at 2714.271 kb on + strand, within HP15_2567 at 2714.279 kb on - strand, within HP15_2567 at 2714.279 kb on - strand, within HP15_2567 at 2714.345 kb on - strand, within HP15_2567 at 2714.476 kb on - strand, within HP15_2567 at 2714.581 kb on + strand, within HP15_2567 at 2714.787 kb on + strand, within HP15_2567 at 2714.795 kb on - strand, within HP15_2567 at 2714.795 kb on - strand, within HP15_2567 at 2714.996 kb on - strand at 2715.031 kb on + strand at 2715.154 kb on - strand at 2715.292 kb on + strand, within HP15_2568 at 2715.318 kb on + strand, within HP15_2568 at 2715.377 kb on - strand, within HP15_2568 at 2715.396 kb on - strand, within HP15_2568 at 2715.452 kb on + strand, within HP15_2568 at 2715.531 kb on + strand, within HP15_2568 at 2715.656 kb on - strand, within HP15_2568 at 2715.746 kb on + strand, within HP15_2568 at 2715.758 kb on + strand, within HP15_2568 at 2715.758 kb on + strand, within HP15_2568 at 2715.825 kb on + strand, within HP15_2568 at 2715.833 kb on - strand, within HP15_2568 at 2715.896 kb on + strand, within HP15_2568 at 2715.952 kb on + strand, within HP15_2568 at 2715.957 kb on + strand, within HP15_2568 at 2715.957 kb on + strand, within HP15_2568 at 2716.017 kb on - strand, within HP15_2568 at 2716.041 kb on + strand, within HP15_2568 at 2716.049 kb on - strand, within HP15_2568 at 2716.090 kb on + strand, within HP15_2568 at 2716.127 kb on + strand, within HP15_2568 at 2716.156 kb on - strand, within HP15_2568 at 2716.179 kb on + strand, within HP15_2568 at 2716.246 kb on + strand, within HP15_2568 at 2716.438 kb on - strand at 2716.463 kb on + strand at 2716.623 kb on - strand, within HP15_2569 at 2716.623 kb on - strand, within HP15_2569 at 2716.633 kb on - strand, within HP15_2569 at 2716.723 kb on + strand, within HP15_2569 at 2716.749 kb on - strand at 2716.768 kb on - strand at 2716.879 kb on + strand at 2717.103 kb on - strand, within HP15_2570 at 2717.395 kb on - strand, within HP15_2570 at 2717.398 kb on + strand, within HP15_2570
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 25C remove 2,714,186 + HP15_2567 0.19 +0.4 2,714,194 - HP15_2567 0.20 -1.0 2,714,246 - HP15_2567 0.24 +1.2 2,714,271 + HP15_2567 0.27 -0.3 2,714,271 + HP15_2567 0.27 -0.8 2,714,271 + HP15_2567 0.27 +0.5 2,714,271 + HP15_2567 0.27 -0.6 2,714,279 - HP15_2567 0.27 +0.4 2,714,279 - HP15_2567 0.27 +0.8 2,714,345 - HP15_2567 0.34 -0.1 2,714,476 - HP15_2567 0.45 -1.3 2,714,581 + HP15_2567 0.55 +0.5 2,714,787 + HP15_2567 0.74 +0.1 2,714,795 - HP15_2567 0.75 +0.2 2,714,795 - HP15_2567 0.75 +1.2 2,714,996 - -0.4 2,715,031 + +0.3 2,715,154 - +0.7 2,715,292 + HP15_2568 0.10 -0.5 2,715,318 + HP15_2568 0.12 +0.5 2,715,377 - HP15_2568 0.17 -0.2 2,715,396 - HP15_2568 0.18 +0.1 2,715,452 + HP15_2568 0.23 +0.5 2,715,531 + HP15_2568 0.29 +0.1 2,715,656 - HP15_2568 0.38 +2.1 2,715,746 + HP15_2568 0.45 +0.0 2,715,758 + HP15_2568 0.46 +0.1 2,715,758 + HP15_2568 0.46 +1.2 2,715,825 + HP15_2568 0.51 -0.4 2,715,833 - HP15_2568 0.52 +1.5 2,715,896 + HP15_2568 0.56 -1.3 2,715,952 + HP15_2568 0.61 +0.5 2,715,957 + HP15_2568 0.61 +1.9 2,715,957 + HP15_2568 0.61 -0.3 2,716,017 - HP15_2568 0.66 +1.3 2,716,041 + HP15_2568 0.67 -0.4 2,716,049 - HP15_2568 0.68 +0.3 2,716,090 + HP15_2568 0.71 -0.5 2,716,127 + HP15_2568 0.74 -0.0 2,716,156 - HP15_2568 0.76 +0.1 2,716,179 + HP15_2568 0.78 +1.1 2,716,246 + HP15_2568 0.83 +0.1 2,716,438 - +0.7 2,716,463 + -0.4 2,716,623 - HP15_2569 0.49 +0.4 2,716,623 - HP15_2569 0.49 +0.8 2,716,633 - HP15_2569 0.52 -0.6 2,716,723 + HP15_2569 0.83 -0.5 2,716,749 - +0.4 2,716,768 - -0.5 2,716,879 + +1.5 2,717,103 - HP15_2570 0.12 -0.2 2,717,395 - HP15_2570 0.30 +1.3 2,717,398 + HP15_2570 0.30 -0.5
Or see this region's nucleotide sequence