Experiment: m.b. 25C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2426 and HP15_2427 are separated by 164 nucleotides HP15_2427 and HP15_2428 are separated by 161 nucleotides
HP15_2426: HP15_2426 - NGG1p interacting factor 3, NIF3, at 2,567,289 to 2,568,032
_2426
HP15_2427: HP15_2427 - histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) , at 2,568,197 to 2,569,249
_2427
HP15_2428: HP15_2428 - histidinol dehydrogenase, at 2,569,411 to 2,570,715
_2428
Position (kb)
2568
2569
2570 Strain fitness (log2 ratio)
-2
-1
0
1 at 2567.327 kb on + strand at 2567.381 kb on - strand, within HP15_2426 at 2567.410 kb on + strand, within HP15_2426 at 2567.428 kb on - strand, within HP15_2426 at 2567.502 kb on + strand, within HP15_2426 at 2567.502 kb on + strand, within HP15_2426 at 2567.510 kb on - strand, within HP15_2426 at 2567.510 kb on - strand, within HP15_2426 at 2567.515 kb on - strand, within HP15_2426 at 2567.696 kb on + strand, within HP15_2426 at 2568.190 kb on - strand at 2568.508 kb on - strand, within HP15_2427 at 2568.559 kb on - strand, within HP15_2427 at 2568.559 kb on - strand, within HP15_2427 at 2568.756 kb on - strand, within HP15_2427 at 2569.057 kb on + strand, within HP15_2427 at 2569.077 kb on + strand, within HP15_2427 at 2569.277 kb on - strand at 2569.400 kb on - strand at 2569.408 kb on + strand at 2570.182 kb on + strand, within HP15_2428
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 25C remove 2,567,327 + -0.3 2,567,381 - HP15_2426 0.12 +0.7 2,567,410 + HP15_2426 0.16 +0.3 2,567,428 - HP15_2426 0.19 +0.3 2,567,502 + HP15_2426 0.29 +1.1 2,567,502 + HP15_2426 0.29 -0.2 2,567,510 - HP15_2426 0.30 +0.2 2,567,510 - HP15_2426 0.30 -0.1 2,567,515 - HP15_2426 0.30 +1.2 2,567,696 + HP15_2426 0.55 +0.0 2,568,190 - -0.4 2,568,508 - HP15_2427 0.30 +0.3 2,568,559 - HP15_2427 0.34 -1.6 2,568,559 - HP15_2427 0.34 -1.1 2,568,756 - HP15_2427 0.53 +0.1 2,569,057 + HP15_2427 0.82 -1.6 2,569,077 + HP15_2427 0.84 -1.5 2,569,277 - -1.6 2,569,400 - +0.4 2,569,408 + -1.8 2,570,182 + HP15_2428 0.59 -1.9
Or see this region's nucleotide sequence