Experiment: m.b. 25C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HP15_2424 and HP15_2425 are separated by 195 nucleotides HP15_2425 and HP15_2426 are separated by 227 nucleotides HP15_2426 and HP15_2427 are separated by 164 nucleotides
HP15_2424: HP15_2424 - AFG1-family ATPase, at 2,565,292 to 2,566,425
_2424
HP15_2425: HP15_2425 - membrane or secreted protein containing DUF1043, at 2,566,621 to 2,567,061
_2425
HP15_2426: HP15_2426 - NGG1p interacting factor 3, NIF3, at 2,567,289 to 2,568,032
_2426
HP15_2427: HP15_2427 - histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) , at 2,568,197 to 2,569,249
_2427
Position (kb)
2567
2568
2569 Strain fitness (log2 ratio)
-1
0
1 at 2566.392 kb on - strand at 2566.431 kb on - strand at 2566.571 kb on - strand at 2566.684 kb on - strand, within HP15_2425 at 2566.903 kb on - strand, within HP15_2425 at 2566.988 kb on - strand, within HP15_2425 at 2567.101 kb on + strand at 2567.327 kb on + strand at 2567.381 kb on - strand, within HP15_2426 at 2567.410 kb on + strand, within HP15_2426 at 2567.428 kb on - strand, within HP15_2426 at 2567.502 kb on + strand, within HP15_2426 at 2567.502 kb on + strand, within HP15_2426 at 2567.510 kb on - strand, within HP15_2426 at 2567.510 kb on - strand, within HP15_2426 at 2567.515 kb on - strand, within HP15_2426 at 2567.696 kb on + strand, within HP15_2426 at 2568.190 kb on - strand at 2568.508 kb on - strand, within HP15_2427 at 2568.559 kb on - strand, within HP15_2427 at 2568.559 kb on - strand, within HP15_2427 at 2568.756 kb on - strand, within HP15_2427
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 25C remove 2,566,392 - -0.4 2,566,431 - +0.0 2,566,571 - -1.0 2,566,684 - HP15_2425 0.14 +0.4 2,566,903 - HP15_2425 0.64 -0.9 2,566,988 - HP15_2425 0.83 -0.3 2,567,101 + +0.9 2,567,327 + -0.3 2,567,381 - HP15_2426 0.12 +0.7 2,567,410 + HP15_2426 0.16 +0.3 2,567,428 - HP15_2426 0.19 +0.3 2,567,502 + HP15_2426 0.29 +1.1 2,567,502 + HP15_2426 0.29 -0.2 2,567,510 - HP15_2426 0.30 +0.2 2,567,510 - HP15_2426 0.30 -0.1 2,567,515 - HP15_2426 0.30 +1.2 2,567,696 + HP15_2426 0.55 +0.0 2,568,190 - -0.4 2,568,508 - HP15_2427 0.30 +0.3 2,568,559 - HP15_2427 0.34 -1.6 2,568,559 - HP15_2427 0.34 -1.1 2,568,756 - HP15_2427 0.53 +0.1
Or see this region's nucleotide sequence