Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_3390

Experiment: m.b. 30C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. 30C
3,568,035	+				-0.4
3,568,035	+				+0.0
3,568,035	+				-0.4
3,568,035	+				+0.5
3,568,035	+				+1.2
3,568,035	+				-0.2
3,568,035	+				-0.7
3,568,045	+				-0.3
3,568,045	+				+0.0
3,568,062	+				+0.1
3,568,064	+				-0.9
3,568,087	+				+4.5
3,568,087	+				+0.5
3,568,117	-				+1.0
3,568,128	+				-0.9
3,568,153	-				-1.7
3,568,166	+				-0.1
3,568,166	+				-0.6
3,568,174	-				-1.5
3,568,174	-				+0.1
3,568,181	+				-0.5
3,568,181	+				-0.1
3,568,181	+				-0.0
3,568,181	+				+0.4
3,568,181	+				-0.4
3,568,184	-				+0.1
3,568,189	-				-0.2
3,568,189	-				-1.7
3,568,189	-				+0.0
3,568,189	-				+0.7
3,568,189	-				-0.2
3,568,189	-				-0.2
3,568,191	+				-0.4
3,568,191	+				-1.6
3,568,214	-				+0.4
3,568,219	+				+0.4
3,568,229	+				-1.4
3,568,229	+				-1.8
3,568,232	-				-0.5
3,568,248	-		Dshi_3389	0.11	+1.2
3,568,384	+		Dshi_3389	0.27	+0.7
3,568,425	+		Dshi_3389	0.32	-0.0
3,568,425	+		Dshi_3389	0.32	-0.5
3,568,425	+		Dshi_3389	0.32	-0.3
3,568,425	+		Dshi_3389	0.32	+2.0
3,568,425	+		Dshi_3389	0.32	-0.8
3,568,427	-		Dshi_3389	0.32	-0.6
3,568,433	-		Dshi_3389	0.33	+0.2
3,568,433	-		Dshi_3389	0.33	-0.0
3,568,433	-		Dshi_3389	0.33	+1.1
3,568,433	-		Dshi_3389	0.33	+0.6
3,568,433	-		Dshi_3389	0.33	-1.0
3,568,433	-		Dshi_3389	0.33	+0.8
3,568,433	-		Dshi_3389	0.33	-0.4
3,568,433	-		Dshi_3389	0.33	+0.7
3,568,433	-		Dshi_3389	0.33	-1.4
3,568,433	-		Dshi_3389	0.33	+0.7
3,568,452	+		Dshi_3389	0.35	-0.6
3,568,452	+		Dshi_3389	0.35	+0.9
3,568,452	+		Dshi_3389	0.35	+0.2
3,568,452	+		Dshi_3389	0.35	+1.1
3,568,452	+		Dshi_3389	0.35	+0.1
3,568,460	-		Dshi_3389	0.36	-0.5
3,568,460	-		Dshi_3389	0.36	+0.5
3,568,460	-		Dshi_3389	0.36	+1.0
3,568,460	-		Dshi_3389	0.36	-0.9
3,568,472	-		Dshi_3389	0.38	-0.2
3,568,476	-		Dshi_3389	0.38	+0.3
3,568,516	+		Dshi_3389	0.43	+1.0
3,568,540	+		Dshi_3389	0.46	-0.2
3,568,578	-		Dshi_3389	0.51	-0.7
3,568,612	+		Dshi_3389	0.55	-0.2
3,568,612	+		Dshi_3389	0.55	+0.1
3,568,612	+		Dshi_3389	0.55	+1.1
3,568,620	-		Dshi_3389	0.56	+0.0
3,568,620	-		Dshi_3389	0.56	-0.3
3,568,620	-		Dshi_3389	0.56	-0.2
3,568,620	-		Dshi_3389	0.56	+2.0
3,568,620	-		Dshi_3389	0.56	+1.6
3,568,620	-		Dshi_3389	0.56	+1.5
3,568,620	-		Dshi_3389	0.56	-1.3
3,568,637	-		Dshi_3389	0.58	+3.7
3,568,639	+		Dshi_3389	0.58	-0.1
3,568,645	+		Dshi_3389	0.59	+0.8
3,568,672	+		Dshi_3389	0.62	+0.3
3,568,679	+		Dshi_3389	0.63	-0.3
3,568,684	+		Dshi_3389	0.63	-0.3
3,568,687	-		Dshi_3389	0.64	-0.7
3,568,692	-		Dshi_3389	0.64	-1.0
3,568,692	-		Dshi_3389	0.64	+0.2
3,568,692	-		Dshi_3389	0.64	+1.0
3,568,692	-		Dshi_3389	0.64	-2.1
3,568,702	-		Dshi_3389	0.65	+1.4
3,568,789	+		Dshi_3389	0.76	+0.8
3,568,825	-		Dshi_3389	0.80	+3.4
3,568,828	+		Dshi_3389	0.81	+0.2
3,568,835	-		Dshi_3389	0.81	+0.2
3,568,856	-		Dshi_3389	0.84	-0.7
3,568,866	+		Dshi_3389	0.85	-0.6
3,568,866	+		Dshi_3389	0.85	+0.8
3,568,874	-		Dshi_3389	0.86	-1.0
3,568,874	-		Dshi_3389	0.86	-0.2
3,568,904	-		Dshi_3389	0.90	+2.5
3,568,907	-				+0.1
3,568,908	+				+1.8
3,568,908	+				+1.2
3,568,908	+				-1.2
3,568,909	-				+0.2
3,568,909	-				+1.1
3,568,910	+				-0.5
3,568,916	-				+3.6
3,568,916	-				+0.2
3,568,922	+				-0.3
3,568,959	-				-0.1
3,568,962	+				-0.3
3,568,962	+				+1.2
3,568,963	-				+1.1
3,568,970	-				+0.7
3,569,035	+				-0.1
3,569,038	-				+0.1
3,569,041	+				+1.2
3,569,064	+		Dshi_3390	0.10	+0.6
3,569,069	-		Dshi_3390	0.11	+0.3
3,569,072	-		Dshi_3390	0.11	+0.6
3,569,072	-		Dshi_3390	0.11	+1.2
3,569,072	-		Dshi_3390	0.11	-0.7
3,569,072	-		Dshi_3390	0.11	-0.5
3,569,102	-		Dshi_3390	0.15	+2.3
3,569,104	+		Dshi_3390	0.16	-0.9
3,569,120	+		Dshi_3390	0.18	-0.4
3,569,127	-		Dshi_3390	0.19	-0.5
3,569,130	+		Dshi_3390	0.19	+0.5
3,569,131	+		Dshi_3390	0.19	-0.9
3,569,138	-		Dshi_3390	0.20	+0.6
3,569,150	+		Dshi_3390	0.22	+2.0
3,569,150	+		Dshi_3390	0.22	+0.3
3,569,150	+		Dshi_3390	0.22	-0.1
3,569,152	-		Dshi_3390	0.22	+0.1
3,569,158	-		Dshi_3390	0.23	-1.0
3,569,175	+		Dshi_3390	0.25	-0.8
3,569,175	+		Dshi_3390	0.25	-0.4
3,569,175	+		Dshi_3390	0.25	-0.7
3,569,178	+		Dshi_3390	0.25	-0.6
3,569,180	+		Dshi_3390	0.26	-0.7
3,569,183	-		Dshi_3390	0.26	-0.7
3,569,188	-		Dshi_3390	0.27	-1.1
3,569,200	+		Dshi_3390	0.28	-1.1
3,569,205	+		Dshi_3390	0.29	+0.1
3,569,205	+		Dshi_3390	0.29	-0.3
3,569,218	-		Dshi_3390	0.31	-0.1
3,569,244	-		Dshi_3390	0.34	-0.1
3,569,302	+		Dshi_3390	0.42	-0.9
3,569,324	+		Dshi_3390	0.44	+1.2
3,569,334	+		Dshi_3390	0.46	+1.5
3,569,370	-		Dshi_3390	0.51	-0.4
3,569,412	-		Dshi_3390	0.56	+2.5
3,569,472	+		Dshi_3390	0.64	+0.9
3,569,480	-		Dshi_3390	0.65	-0.3
3,569,536	+		Dshi_3390	0.72	+0.3
3,569,536	-		Dshi_3390	0.72	+0.3
3,569,544	-		Dshi_3390	0.73	+1.2
3,569,544	-		Dshi_3390	0.73	-0.4
3,569,554	-		Dshi_3390	0.75	+2.4
3,569,570	+		Dshi_3390	0.77	+0.4
3,569,648	-		Dshi_3390	0.87	-1.4
3,569,649	-		Dshi_3390	0.87	-0.7
3,569,649	-		Dshi_3390	0.87	-0.9
3,569,649	-		Dshi_3390	0.87	+2.8
3,569,675	+				-0.3
3,569,683	-				+0.9
3,569,683	-				+0.0
3,569,683	-				-3.1
3,569,690	+				-1.1
3,569,699	+				+0.2
3,569,748	+				-1.1
3,569,748	+				-0.0
3,569,748	+				-1.3
3,569,748	+				-1.0
3,569,755	+				-0.3
3,569,756	-				-0.6
3,569,756	-				-0.0
3,569,756	-				+1.1
3,569,756	-				+0.4
3,569,787	-				-0.6
3,569,812	-				+1.3
3,569,836	+		Dshi_3391	0.11	-0.7
3,569,836	+		Dshi_3391	0.11	-1.3
3,569,836	+		Dshi_3391	0.11	+0.1
3,569,836	+		Dshi_3391	0.11	-0.7
3,569,844	-		Dshi_3391	0.12	-0.6
3,569,844	-		Dshi_3391	0.12	+0.6
3,569,855	-		Dshi_3391	0.13	-1.8
3,569,860	-		Dshi_3391	0.14	-0.6
3,569,923	-		Dshi_3391	0.22	+0.0
3,569,934	-		Dshi_3391	0.23	-1.1
3,569,935	-		Dshi_3391	0.23	+1.3
3,570,027	-		Dshi_3391	0.35	-0.1
3,570,034	+		Dshi_3391	0.35	+0.3
3,570,063	-		Dshi_3391	0.39	-0.6
3,570,065	-		Dshi_3391	0.39	+3.1
3,570,065	-		Dshi_3391	0.39	+0.3
3,570,065	-		Dshi_3391	0.39	+0.9
3,570,065	-		Dshi_3391	0.39	+0.3
3,570,065	-		Dshi_3391	0.39	+0.5
3,570,129	+		Dshi_3391	0.47	+0.2
3,570,134	+		Dshi_3391	0.48	-1.8
3,570,137	-		Dshi_3391	0.48	+0.5
3,570,139	+		Dshi_3391	0.49	+1.2
3,570,199	-		Dshi_3391	0.56	-0.5
3,570,241	+		Dshi_3391	0.61	+0.6
3,570,249	-		Dshi_3391	0.62	+0.0
3,570,261	+		Dshi_3391	0.64	-0.3
3,570,289	+		Dshi_3391	0.67	-0.5
3,570,318	-		Dshi_3391	0.71	+0.3
3,570,332	+		Dshi_3391	0.73	-1.8
3,570,370	-		Dshi_3391	0.77	-0.4
3,570,406	+		Dshi_3391	0.82	-0.0
3,570,493	-				+0.6
3,570,535	+				-0.6
3,570,543	-				+0.3
3,570,543	-				-0.8
3,570,551	-				-0.4
3,570,558	+				+0.3
3,570,558	-				+2.2
3,570,566	-				-0.4
3,570,566	-				-0.3
3,570,576	-		Dshi_3392	0.10	+1.6
3,570,589	+		Dshi_3392	0.14	-0.0
3,570,589	+		Dshi_3392	0.14	-0.4
3,570,634	+		Dshi_3392	0.30	+0.0