Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_1963 and Dshi_1964 are separated by 572 nucleotides Dshi_1964 and Dshi_1965 are separated by 105 nucleotides
Dshi_1963: Dshi_1963 - Beta-ketoacyl synthase (RefSeq), at 2,062,881 to 2,070,542
_1963
Dshi_1964: Dshi_1964 - FkbH like protein (RefSeq), at 2,071,115 to 2,072,833
_1964
Dshi_1965: Dshi_1965 - hypothetical protein (RefSeq), at 2,072,939 to 2,073,871
_1965
Position (kb)
2071
2072
2073 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2070.201 kb on - strand at 2070.262 kb on + strand at 2070.395 kb on - strand at 2070.498 kb on + strand at 2070.552 kb on + strand at 2070.560 kb on - strand at 2070.587 kb on + strand at 2070.595 kb on - strand at 2070.600 kb on + strand at 2070.619 kb on + strand at 2070.624 kb on + strand at 2070.624 kb on + strand at 2070.624 kb on + strand at 2070.624 kb on + strand at 2070.624 kb on + strand at 2070.624 kb on + strand at 2070.624 kb on + strand at 2070.624 kb on + strand at 2070.631 kb on + strand at 2070.631 kb on + strand at 2070.632 kb on - strand at 2070.632 kb on - strand at 2070.632 kb on - strand at 2070.632 kb on - strand at 2070.632 kb on - strand at 2070.632 kb on - strand at 2070.632 kb on - strand at 2070.639 kb on - strand at 2070.639 kb on - strand at 2070.639 kb on - strand at 2070.649 kb on - strand at 2070.656 kb on - strand at 2070.657 kb on + strand at 2070.664 kb on - strand at 2070.666 kb on - strand at 2070.758 kb on + strand at 2070.823 kb on - strand at 2070.849 kb on + strand at 2070.851 kb on + strand at 2070.851 kb on + strand at 2070.854 kb on + strand at 2070.861 kb on + strand at 2070.899 kb on + strand at 2070.925 kb on - strand at 2070.940 kb on + strand at 2070.978 kb on + strand at 2070.991 kb on + strand at 2070.991 kb on + strand at 2070.991 kb on + strand at 2070.999 kb on - strand at 2070.999 kb on - strand at 2070.999 kb on - strand at 2070.999 kb on - strand at 2070.999 kb on - strand at 2071.072 kb on + strand at 2071.080 kb on - strand at 2071.095 kb on - strand at 2071.112 kb on - strand at 2071.140 kb on + strand at 2071.140 kb on + strand at 2071.140 kb on + strand at 2071.140 kb on + strand at 2071.140 kb on + strand at 2071.148 kb on - strand at 2071.148 kb on - strand at 2071.148 kb on - strand at 2071.250 kb on - strand at 2071.279 kb on - strand at 2071.279 kb on - strand at 2071.290 kb on + strand, within Dshi_1964 at 2071.432 kb on + strand, within Dshi_1964 at 2071.444 kb on + strand, within Dshi_1964 at 2071.531 kb on - strand, within Dshi_1964 at 2071.561 kb on - strand, within Dshi_1964 at 2071.562 kb on - strand, within Dshi_1964 at 2071.597 kb on - strand, within Dshi_1964 at 2071.599 kb on + strand, within Dshi_1964 at 2071.637 kb on - strand, within Dshi_1964 at 2071.654 kb on + strand, within Dshi_1964 at 2071.749 kb on - strand, within Dshi_1964 at 2071.885 kb on - strand, within Dshi_1964 at 2071.905 kb on + strand, within Dshi_1964 at 2071.924 kb on - strand, within Dshi_1964 at 2072.002 kb on + strand, within Dshi_1964 at 2072.002 kb on + strand, within Dshi_1964 at 2072.008 kb on + strand, within Dshi_1964 at 2072.016 kb on - strand, within Dshi_1964 at 2072.098 kb on - strand, within Dshi_1964 at 2072.117 kb on - strand, within Dshi_1964 at 2072.149 kb on + strand, within Dshi_1964 at 2072.153 kb on - strand, within Dshi_1964 at 2072.155 kb on - strand, within Dshi_1964 at 2072.293 kb on - strand, within Dshi_1964 at 2072.293 kb on - strand, within Dshi_1964 at 2072.320 kb on - strand, within Dshi_1964 at 2072.325 kb on + strand, within Dshi_1964 at 2072.448 kb on + strand, within Dshi_1964 at 2072.464 kb on - strand, within Dshi_1964 at 2072.578 kb on + strand, within Dshi_1964 at 2072.635 kb on - strand, within Dshi_1964 at 2072.659 kb on + strand, within Dshi_1964 at 2072.731 kb on + strand at 2072.793 kb on + strand at 2072.851 kb on - strand at 2072.864 kb on + strand at 2072.872 kb on - strand at 2072.885 kb on + strand at 2072.945 kb on + strand at 2073.040 kb on - strand, within Dshi_1965 at 2073.074 kb on - strand, within Dshi_1965 at 2073.074 kb on - strand, within Dshi_1965 at 2073.079 kb on + strand, within Dshi_1965 at 2073.146 kb on + strand, within Dshi_1965 at 2073.302 kb on + strand, within Dshi_1965 at 2073.483 kb on + strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.491 kb on - strand, within Dshi_1965 at 2073.605 kb on + strand, within Dshi_1965 at 2073.683 kb on + strand, within Dshi_1965 at 2073.709 kb on - strand, within Dshi_1965
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 2,070,201 - -0.4 2,070,262 + -0.7 2,070,395 - -1.3 2,070,498 + -0.4 2,070,552 + +3.1 2,070,560 - -0.9 2,070,587 + -1.9 2,070,595 - -2.7 2,070,600 + -1.3 2,070,619 + -1.3 2,070,624 + +2.7 2,070,624 + -0.8 2,070,624 + +0.3 2,070,624 + +0.1 2,070,624 + +1.5 2,070,624 + +1.8 2,070,624 + +2.1 2,070,624 + -3.5 2,070,631 + -0.1 2,070,631 + -0.5 2,070,632 - +0.1 2,070,632 - +0.1 2,070,632 - +1.1 2,070,632 - -2.2 2,070,632 - +2.1 2,070,632 - -1.6 2,070,632 - +2.4 2,070,639 - -0.9 2,070,639 - +0.1 2,070,639 - +2.0 2,070,649 - -0.9 2,070,656 - +1.7 2,070,657 + -0.9 2,070,664 - -0.5 2,070,666 - +0.2 2,070,758 + -1.5 2,070,823 - -1.2 2,070,849 + +0.1 2,070,851 + +0.1 2,070,851 + -0.1 2,070,854 + -0.1 2,070,861 + -1.1 2,070,899 + -0.6 2,070,925 - -0.7 2,070,940 + -1.7 2,070,978 + -0.9 2,070,991 + -0.1 2,070,991 + +2.4 2,070,991 + -0.2 2,070,999 - +2.7 2,070,999 - -1.0 2,070,999 - -0.7 2,070,999 - -0.6 2,070,999 - +1.1 2,071,072 + +0.5 2,071,080 - -0.3 2,071,095 - +0.4 2,071,112 - -0.5 2,071,140 + -0.3 2,071,140 + -1.2 2,071,140 + -0.8 2,071,140 + -2.2 2,071,140 + -0.3 2,071,148 - -0.8 2,071,148 - +0.1 2,071,148 - -2.5 2,071,250 - -0.8 2,071,279 - -2.9 2,071,279 - +0.3 2,071,290 + Dshi_1964 0.10 +0.7 2,071,432 + Dshi_1964 0.18 -4.0 2,071,444 + Dshi_1964 0.19 -0.8 2,071,531 - Dshi_1964 0.24 +0.2 2,071,561 - Dshi_1964 0.26 -1.3 2,071,562 - Dshi_1964 0.26 -1.1 2,071,597 - Dshi_1964 0.28 +0.1 2,071,599 + Dshi_1964 0.28 +0.1 2,071,637 - Dshi_1964 0.30 -1.9 2,071,654 + Dshi_1964 0.31 +1.3 2,071,749 - Dshi_1964 0.37 +0.3 2,071,885 - Dshi_1964 0.45 +0.1 2,071,905 + Dshi_1964 0.46 +0.1 2,071,924 - Dshi_1964 0.47 -2.1 2,072,002 + Dshi_1964 0.52 -0.1 2,072,002 + Dshi_1964 0.52 -1.9 2,072,008 + Dshi_1964 0.52 -1.2 2,072,016 - Dshi_1964 0.52 -4.5 2,072,098 - Dshi_1964 0.57 -0.5 2,072,117 - Dshi_1964 0.58 -1.9 2,072,149 + Dshi_1964 0.60 -0.9 2,072,153 - Dshi_1964 0.60 -0.9 2,072,155 - Dshi_1964 0.61 -2.7 2,072,293 - Dshi_1964 0.69 -2.9 2,072,293 - Dshi_1964 0.69 -1.2 2,072,320 - Dshi_1964 0.70 +0.8 2,072,325 + Dshi_1964 0.70 -1.3 2,072,448 + Dshi_1964 0.78 +2.3 2,072,464 - Dshi_1964 0.78 -1.8 2,072,578 + Dshi_1964 0.85 -0.7 2,072,635 - Dshi_1964 0.88 -1.0 2,072,659 + Dshi_1964 0.90 -1.4 2,072,731 + +0.1 2,072,793 + +0.3 2,072,851 - -0.8 2,072,864 + -0.5 2,072,872 - -0.1 2,072,885 + -0.2 2,072,945 + +0.1 2,073,040 - Dshi_1965 0.11 -3.0 2,073,074 - Dshi_1965 0.14 -0.9 2,073,074 - Dshi_1965 0.14 -0.4 2,073,079 + Dshi_1965 0.15 +0.6 2,073,146 + Dshi_1965 0.22 -3.5 2,073,302 + Dshi_1965 0.39 +0.5 2,073,483 + Dshi_1965 0.58 -1.8 2,073,491 - Dshi_1965 0.59 -0.5 2,073,491 - Dshi_1965 0.59 +1.4 2,073,491 - Dshi_1965 0.59 -1.1 2,073,605 + Dshi_1965 0.71 -0.5 2,073,683 + Dshi_1965 0.80 +2.9 2,073,709 - Dshi_1965 0.83 -0.7
Or see this region's nucleotide sequence