Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0765 and Dshi_0766 are separated by 77 nucleotides Dshi_0766 and Dshi_0767 are separated by 1 nucleotides Dshi_0767 and Dshi_0768 are separated by 176 nucleotides
Dshi_0765: Dshi_0765 - transcriptional regulator, MarR family (RefSeq), at 773,281 to 773,778
_0765
Dshi_0766: Dshi_0766 - protein of unknown function DUF1194 (RefSeq), at 773,856 to 774,593
_0766
Dshi_0767: Dshi_0767 - Glyoxalase/bleomycin resistance protein/dioxygenase (RefSeq), at 774,595 to 775,023
_0767
Dshi_0768: Dshi_0768 - thymidylate synthase, flavin-dependent (RefSeq), at 775,200 to 776,117
_0768
Position (kb)
774
775
776 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 773.621 kb on + strand, within Dshi_0765 at 773.745 kb on + strand at 773.745 kb on + strand at 773.745 kb on + strand at 773.753 kb on - strand at 773.795 kb on - strand at 773.805 kb on - strand at 773.836 kb on + strand at 773.836 kb on + strand at 773.844 kb on - strand at 773.844 kb on - strand at 773.872 kb on - strand at 773.876 kb on + strand at 773.904 kb on + strand at 773.954 kb on - strand, within Dshi_0766 at 773.954 kb on - strand, within Dshi_0766 at 773.954 kb on - strand, within Dshi_0766 at 773.960 kb on + strand, within Dshi_0766 at 773.968 kb on - strand, within Dshi_0766 at 774.004 kb on + strand, within Dshi_0766 at 774.075 kb on - strand, within Dshi_0766 at 774.080 kb on + strand, within Dshi_0766 at 774.199 kb on - strand, within Dshi_0766 at 774.254 kb on + strand, within Dshi_0766 at 774.303 kb on + strand, within Dshi_0766 at 774.531 kb on - strand at 774.537 kb on - strand at 774.539 kb on + strand at 774.539 kb on + strand at 774.542 kb on - strand at 774.542 kb on - strand at 774.542 kb on - strand at 774.575 kb on + strand at 774.646 kb on + strand, within Dshi_0767 at 774.679 kb on + strand, within Dshi_0767 at 774.882 kb on - strand, within Dshi_0767 at 774.911 kb on - strand, within Dshi_0767 at 774.950 kb on - strand, within Dshi_0767 at 774.979 kb on + strand, within Dshi_0767 at 775.065 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 773,621 + Dshi_0765 0.68 -1.8 773,745 + -0.6 773,745 + -2.3 773,745 + +0.9 773,753 - -0.6 773,795 - -1.2 773,805 - -0.8 773,836 + +1.0 773,836 + +0.2 773,844 - +0.4 773,844 - +2.2 773,872 - -0.4 773,876 + -1.4 773,904 + +0.2 773,954 - Dshi_0766 0.13 +0.2 773,954 - Dshi_0766 0.13 -0.2 773,954 - Dshi_0766 0.13 +0.2 773,960 + Dshi_0766 0.14 -2.4 773,968 - Dshi_0766 0.15 +1.3 774,004 + Dshi_0766 0.20 -0.8 774,075 - Dshi_0766 0.30 +0.5 774,080 + Dshi_0766 0.30 +3.0 774,199 - Dshi_0766 0.46 -1.4 774,254 + Dshi_0766 0.54 +0.9 774,303 + Dshi_0766 0.61 +0.2 774,531 - -0.6 774,537 - -2.2 774,539 + -0.0 774,539 + -1.8 774,542 - -1.0 774,542 - -2.4 774,542 - +0.2 774,575 + +0.2 774,646 + Dshi_0767 0.12 +2.0 774,679 + Dshi_0767 0.20 -0.1 774,882 - Dshi_0767 0.67 +1.2 774,911 - Dshi_0767 0.74 +1.8 774,950 - Dshi_0767 0.83 +0.2 774,979 + Dshi_0767 0.90 +0.2 775,065 + +0.0
Or see this region's nucleotide sequence