Experiment: m.b. 30C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_0490 and Dshi_0491 are separated by 142 nucleotides
Dshi_0490: Dshi_0490 - hypothetical protein (RefSeq), at 475,571 to 475,996
_0490
Dshi_0491: Dshi_0491 - putative sulfonate/nitrate transport system substrate-binding protein (RefSeq), at 476,139 to 477,122
_0491
Position (kb)
475
476 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 474.575 kb on + strand at 474.575 kb on + strand at 474.575 kb on + strand at 474.575 kb on + strand at 474.583 kb on - strand at 474.583 kb on - strand at 474.583 kb on - strand at 474.611 kb on + strand at 474.614 kb on - strand at 474.615 kb on - strand at 474.651 kb on - strand at 474.651 kb on - strand at 474.676 kb on + strand at 474.678 kb on - strand at 474.694 kb on - strand at 474.696 kb on - strand at 474.696 kb on - strand at 474.699 kb on + strand at 474.707 kb on - strand at 474.707 kb on - strand at 474.707 kb on - strand at 474.707 kb on - strand at 474.710 kb on + strand at 474.718 kb on - strand at 474.723 kb on + strand at 474.765 kb on + strand at 474.768 kb on - strand at 474.768 kb on - strand at 474.771 kb on + strand at 474.778 kb on + strand at 474.792 kb on - strand at 474.799 kb on - strand at 474.801 kb on + strand at 474.806 kb on - strand at 474.809 kb on - strand at 474.811 kb on + strand at 474.816 kb on + strand at 474.816 kb on + strand at 474.826 kb on + strand at 474.826 kb on + strand at 474.827 kb on + strand at 474.837 kb on - strand at 474.852 kb on - strand at 474.860 kb on + strand at 474.875 kb on + strand at 474.880 kb on + strand at 474.883 kb on - strand at 474.908 kb on + strand at 474.910 kb on - strand at 474.916 kb on - strand at 474.916 kb on - strand at 474.922 kb on - strand at 474.922 kb on - strand at 474.939 kb on + strand at 474.939 kb on + strand at 474.945 kb on + strand at 474.945 kb on + strand at 474.947 kb on - strand at 474.953 kb on - strand at 474.953 kb on - strand at 474.967 kb on + strand at 474.967 kb on + strand at 474.975 kb on - strand at 474.977 kb on + strand at 474.983 kb on + strand at 474.985 kb on - strand at 474.991 kb on - strand at 474.998 kb on + strand at 475.004 kb on + strand at 475.014 kb on + strand at 475.014 kb on + strand at 475.014 kb on + strand at 475.022 kb on - strand at 475.022 kb on - strand at 475.044 kb on + strand at 475.066 kb on + strand at 475.074 kb on - strand at 475.074 kb on - strand at 475.110 kb on + strand at 475.146 kb on + strand at 475.147 kb on - strand at 475.154 kb on - strand at 475.154 kb on - strand at 475.154 kb on - strand at 475.166 kb on + strand at 475.222 kb on - strand at 475.234 kb on + strand at 475.251 kb on - strand at 475.306 kb on + strand at 475.306 kb on + strand at 475.314 kb on + strand at 475.314 kb on - strand at 475.324 kb on + strand at 475.324 kb on + strand at 475.324 kb on + strand at 475.327 kb on - strand at 475.332 kb on - strand at 475.391 kb on - strand at 475.474 kb on - strand at 475.474 kb on - strand at 475.512 kb on + strand at 475.515 kb on - strand at 475.515 kb on - strand at 475.537 kb on + strand at 475.538 kb on - strand at 475.549 kb on - strand at 475.564 kb on - strand at 475.573 kb on + strand at 475.592 kb on + strand at 475.803 kb on - strand, within Dshi_0490 at 475.814 kb on - strand, within Dshi_0490 at 475.865 kb on - strand, within Dshi_0490 at 475.870 kb on - strand, within Dshi_0490 at 475.936 kb on + strand, within Dshi_0490 at 475.944 kb on - strand, within Dshi_0490 at 475.955 kb on + strand at 475.957 kb on - strand at 476.013 kb on - strand at 476.018 kb on + strand at 476.185 kb on - strand at 476.274 kb on + strand, within Dshi_0491 at 476.279 kb on + strand, within Dshi_0491 at 476.340 kb on - strand, within Dshi_0491 at 476.355 kb on - strand, within Dshi_0491 at 476.367 kb on + strand, within Dshi_0491 at 476.457 kb on - strand, within Dshi_0491 at 476.475 kb on - strand, within Dshi_0491 at 476.485 kb on - strand, within Dshi_0491 at 476.586 kb on + strand, within Dshi_0491 at 476.596 kb on + strand, within Dshi_0491 at 476.604 kb on - strand, within Dshi_0491 at 476.645 kb on + strand, within Dshi_0491 at 476.711 kb on - strand, within Dshi_0491 at 476.811 kb on - strand, within Dshi_0491 at 476.836 kb on + strand, within Dshi_0491 at 476.836 kb on + strand, within Dshi_0491 at 476.923 kb on - strand, within Dshi_0491 at 476.966 kb on - strand, within Dshi_0491
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. 30C remove 474,575 + -1.9 474,575 + -0.2 474,575 + -2.2 474,575 + -0.8 474,583 - -0.5 474,583 - -1.8 474,583 - -0.9 474,611 + +1.2 474,614 - -1.9 474,615 - -1.0 474,651 - -0.6 474,651 - -3.8 474,676 + +1.9 474,678 - +0.0 474,694 - +0.1 474,696 - +0.3 474,696 - +0.4 474,699 + -0.1 474,707 - -0.4 474,707 - -0.9 474,707 - -1.1 474,707 - -1.0 474,710 + -0.4 474,718 - -1.5 474,723 + -0.6 474,765 + +1.0 474,768 - -0.1 474,768 - -1.2 474,771 + +1.5 474,778 + +2.2 474,792 - +0.4 474,799 - -0.9 474,801 + -0.0 474,806 - -0.9 474,809 - +0.9 474,811 + -1.9 474,816 + -1.3 474,816 + +0.1 474,826 + -0.0 474,826 + -1.3 474,827 + +0.7 474,837 - +0.8 474,852 - -0.0 474,860 + -0.4 474,875 + -0.3 474,880 + +2.3 474,883 - +0.5 474,908 + -0.7 474,910 - -0.3 474,916 - -1.7 474,916 - +1.3 474,922 - +3.2 474,922 - +0.1 474,939 + -0.0 474,939 + +2.8 474,945 + -1.0 474,945 + +2.4 474,947 - +0.1 474,953 - -1.9 474,953 - -1.7 474,967 + +0.9 474,967 + +2.5 474,975 - -0.1 474,977 + -3.0 474,983 + -2.9 474,985 - -0.7 474,991 - -0.7 474,998 + +0.3 475,004 + -2.0 475,014 + +1.0 475,014 + +0.5 475,014 + +0.1 475,022 - -0.8 475,022 - -0.1 475,044 + +0.3 475,066 + -2.5 475,074 - -0.7 475,074 - -0.6 475,110 + -0.7 475,146 + -1.1 475,147 - +0.7 475,154 - +0.3 475,154 - +0.8 475,154 - +1.0 475,166 + -0.9 475,222 - +1.1 475,234 + -1.5 475,251 - -0.3 475,306 + -2.9 475,306 + +0.5 475,314 + -2.1 475,314 - -0.9 475,324 + +2.5 475,324 + -0.6 475,324 + -0.4 475,327 - -0.4 475,332 - -1.9 475,391 - -2.2 475,474 - -0.2 475,474 - -1.4 475,512 + -1.5 475,515 - -0.7 475,515 - +0.5 475,537 + +1.0 475,538 - -0.0 475,549 - -0.4 475,564 - -1.7 475,573 + +1.0 475,592 + -2.4 475,803 - Dshi_0490 0.54 -1.6 475,814 - Dshi_0490 0.57 +0.5 475,865 - Dshi_0490 0.69 +2.0 475,870 - Dshi_0490 0.70 +0.4 475,936 + Dshi_0490 0.86 +3.0 475,944 - Dshi_0490 0.88 +0.1 475,955 + +1.5 475,957 - -1.3 476,013 - -0.0 476,018 + +1.4 476,185 - +1.0 476,274 + Dshi_0491 0.14 -0.1 476,279 + Dshi_0491 0.14 -0.1 476,340 - Dshi_0491 0.20 +1.9 476,355 - Dshi_0491 0.22 +1.5 476,367 + Dshi_0491 0.23 +1.5 476,457 - Dshi_0491 0.32 +0.9 476,475 - Dshi_0491 0.34 -1.1 476,485 - Dshi_0491 0.35 +2.9 476,586 + Dshi_0491 0.45 -0.8 476,596 + Dshi_0491 0.46 -0.9 476,604 - Dshi_0491 0.47 -1.8 476,645 + Dshi_0491 0.51 -1.0 476,711 - Dshi_0491 0.58 -1.0 476,811 - Dshi_0491 0.68 +0.6 476,836 + Dshi_0491 0.71 +0.3 476,836 + Dshi_0491 0.71 -0.1 476,923 - Dshi_0491 0.80 +0.3 476,966 - Dshi_0491 0.84 +1.5
Or see this region's nucleotide sequence