Strain Fitness in Shewanella oneidensis MR-1 around SO_A0163

Experiment: M5 outer

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	M5 outer
151,205	+				+1.3
151,206	+				+1.3
151,206	+				+1.3
151,216	+				+2.9
151,216	+				-1.9
151,216	+				+0.2
151,216	+				-1.5
151,216	+				+0.6
151,216	+				+1.1
151,216	+				-1.8
151,216	+				+0.8
151,216	+				-1.7
151,216	+				+0.9
151,216	+				+2.7
151,216	+				+1.1
151,216	+				-2.6
151,216	+				-0.2
151,232	+				+1.3
151,232	+				+0.9
151,232	+				-0.1
151,232	+				+1.6
151,239	+				-0.3
151,240	-				-1.8
151,240	-				-1.3
151,240	-				+0.6
151,242	-				-1.6
151,287	+				+0.7
151,287	+				-0.2
151,290	-				-1.1
151,295	-				-2.4
151,295	-				+0.1
151,295	-				-2.5
151,310	-				+1.0
151,311	+				-2.0
151,319	-				-0.3
151,346	-				+1.0
151,349	-				-1.2
151,357	+				-1.5
151,377	+				-0.5
151,392	+				-1.2
151,392	+				-0.1
151,393	-				-3.3
151,397	+				-2.9
151,400	-				-1.1
151,406	+				-0.3
151,408	+				-0.9
151,408	+				+0.9
151,408	+				-0.2
151,414	-				+0.9
151,416	-				-0.1
151,416	-				-1.5
151,416	-				+2.3
151,416	-				+2.2
151,416	-				-0.1
151,438	-				+1.9
151,460	-				-1.1
151,460	-				-1.1
151,464	-				-0.1
151,466	+				+0.3
151,469	-				-1.0
151,471	+				-0.2
151,474	-				+0.2
151,482	-				+0.8
151,482	-				+0.5
151,482	-				+1.8
151,485	+				-2.4
151,485	+				-0.9
151,493	-				-2.0
151,493	-				+0.4
151,494	+				-0.2
151,505	+				-0.8
151,509	+				+0.5
151,509	+				-1.5
151,509	+				-0.3
151,510	+				-0.3
151,510	+				+0.6
151,510	+				+1.4
151,510	+				+2.4
151,510	+				+0.4
151,510	+				+1.1
151,510	+				+1.1
151,510	+				-0.4
151,510	+				-0.4
151,510	+				-2.2
151,510	+				+0.5
151,510	+				-0.0
151,510	+				-0.5
151,510	+				+0.9
151,510	+				-0.5
151,510	+				-1.0
151,510	+				+0.8
151,517	-				+1.5
151,517	-				-0.2
151,518	-				-0.3
151,518	-				-0.4
151,518	-				-2.0
151,518	-				-0.5
151,518	-				-3.4
151,518	-				-0.1
151,518	-				-0.4
151,518	-				+1.3
151,518	-				+0.9
151,518	-				+1.4
151,518	-				-0.4
151,518	-				-1.7
151,518	-				+0.6
151,518	-				+0.4
151,518	-				+1.0
151,518	-				+1.3
151,518	-				+0.2
151,518	-				+1.3
151,518	-				-3.4
151,518	-				-1.0
151,518	-				+0.5
151,518	-				+0.1
151,518	-				-0.9
151,519	+				-0.4
151,519	+				+1.1
151,519	+				-1.6
151,527	-				-1.1
151,527	-				-2.3
151,536	-				-0.0
151,537	-				-0.3
151,550	+				+1.2
151,551	+				-0.8
151,558	-				-1.1
151,558	-				-0.5
151,559	+				+2.2
151,560	+				+0.6
151,560	+				-2.6
151,566	+				-1.9
151,568	-				-0.6
151,569	-				-2.0
151,578	+				+0.2
151,578	+				-0.3
151,578	+				-1.4
151,586	-				-0.2
151,595	+				+0.2
151,595	+				-1.4
151,599	+				-0.3
151,599	+				-0.1
151,599	+				+0.6
151,603	-				+0.4
151,603	-				+0.0
151,603	-				+0.2
151,603	-				+0.7
151,603	-				-1.0
151,603	-				+1.0
151,634	-				-2.2
151,651	+				-2.3
151,656	+				-0.8
151,656	+				-0.9
151,659	-				+0.8
151,659	-				-1.0
151,659	-				-1.0
151,659	-				-0.9
151,659	-				+0.1
151,659	-				-0.4
151,661	-				-0.2
151,664	-				-3.0
151,666	+				+0.7
151,670	+				-0.4
151,686	-				+0.5
151,695	-				+0.2
151,696	+				-1.9
151,696	+				-2.3
151,696	+				-1.5
151,696	+				+0.8
151,696	+				+0.6
151,696	+				-0.3
151,702	+				-0.3
151,702	+				-1.2
151,703	-				-3.5
151,704	-				-2.7
151,704	-				-2.5
151,704	-				+0.1
151,707	+				+1.1
151,710	+				-1.1
151,710	-				+0.3
151,710	-				-3.3
151,710	-				+0.5
151,710	-				+0.6
151,710	-				+1.2
151,734	+				+3.0
151,742	-				-0.2
151,742	-				+0.2
151,742	-				+0.0
151,749	+				-2.7
151,750	+				+2.3
151,750	+				+1.2
151,750	+				-1.0
151,750	+				-0.1
151,750	+				+0.4
151,757	-				-1.2
151,757	-				-1.6
151,757	-				+0.9
151,758	-				+0.0
151,758	-				-1.0
151,758	-				-1.4
151,758	-				+2.0
151,758	-				+1.1
151,758	-				-0.9
151,765	+				-0.4
151,776	+				+0.4
151,779	+				-2.8
151,783	+				-0.1
151,784	+				-0.1
151,787	-				+1.5
151,792	-				-0.3
151,797	+				-0.0
151,822	-				-0.6
151,842	+				-0.4
151,842	-				+0.9
151,850	-				-2.0
151,862	+				-0.1
151,879	+				+0.5
151,880	+				-0.1
151,887	-				-1.0
151,892	+				-1.7
151,902	+				-0.4
151,980	+				-1.7
152,009	-				-0.6
152,015	+				+3.7
152,023	-				-2.9
152,023	-				-2.5
152,028	-				+0.2
152,030	+				+0.9
152,030	+				+0.5
152,031	-				-0.9
152,039	-				-0.5
152,041	+				+2.5
152,041	+				-1.7
152,048	+		SO_A0163	0.11	-0.7
152,048	+		SO_A0163	0.11	+1.5
152,049	+		SO_A0163	0.11	-0.0
152,049	-		SO_A0163	0.11	+0.9
152,049	-		SO_A0163	0.11	-0.2
152,049	-		SO_A0163	0.11	+1.0
152,049	-		SO_A0163	0.11	-0.1
152,049	-		SO_A0163	0.11	-1.8
152,056	-		SO_A0163	0.12	+0.7
152,056	-		SO_A0163	0.12	-0.9
152,057	-		SO_A0163	0.13	-0.1
152,057	-		SO_A0163	0.13	-2.2
152,064	+		SO_A0163	0.14	-1.0
152,064	+		SO_A0163	0.14	-0.6
152,064	+		SO_A0163	0.14	-1.1
152,064	+		SO_A0163	0.14	-1.0
152,064	+		SO_A0163	0.14	-0.3
152,064	+		SO_A0163	0.14	+2.1
152,064	+		SO_A0163	0.14	+1.2
152,064	+		SO_A0163	0.14	+1.1
152,064	+		SO_A0163	0.14	+1.9
152,064	+		SO_A0163	0.14	-1.7
152,064	+		SO_A0163	0.14	+0.4
152,064	+		SO_A0163	0.14	-1.0
152,064	+		SO_A0163	0.14	-2.1
152,064	+		SO_A0163	0.14	-0.3
152,064	+		SO_A0163	0.14	-0.5
152,064	+		SO_A0163	0.14	-0.7
152,071	+		SO_A0163	0.15	-0.0
152,072	-				-0.3
152,072	-		SO_A0163	0.15	-0.8
152,072	-		SO_A0163	0.15	+0.9
152,072	-		SO_A0163	0.15	-0.5
152,072	-		SO_A0163	0.15	-1.2
152,072	-		SO_A0163	0.15	+0.3
152,072	-		SO_A0163	0.15	-1.0
152,072	-		SO_A0163	0.15	-1.8
152,072	-		SO_A0163	0.15	-0.2
152,072	-		SO_A0163	0.15	+0.4
152,074	+		SO_A0163	0.15	-0.5
152,079	-		SO_A0163	0.16	-0.7
152,080	-		SO_A0163	0.16	+1.3
152,082	-		SO_A0163	0.17	-0.3
152,082	-		SO_A0163	0.17	-1.2
152,090	-		SO_A0163	0.18	+1.0
152,093	+		SO_A0163	0.19	-2.2
152,094	+		SO_A0163	0.19	-0.7
152,110	-		SO_A0163	0.22	-0.6
152,143	+		SO_A0163	0.27	+0.3
152,151	-		SO_A0163	0.29	-1.2
152,151	-		SO_A0163	0.29	-3.2
152,151	-		SO_A0163	0.29	-1.5
152,151	-		SO_A0163	0.29	-0.7
152,153	+		SO_A0163	0.29	+0.4
152,153	+		SO_A0163	0.29	-0.6
152,153	+		SO_A0163	0.29	-0.5
152,153	+		SO_A0163	0.29	-0.5
152,158	+		SO_A0163	0.30	-0.3
152,158	+		SO_A0163	0.30	+1.1
152,161	-		SO_A0163	0.30	-0.5
152,161	-		SO_A0163	0.30	+0.2
152,161	-		SO_A0163	0.30	+1.3
152,161	-		SO_A0163	0.30	+0.9
152,166	-		SO_A0163	0.31	-1.2
152,171	-		SO_A0163	0.32	-0.6
152,175	+		SO_A0163	0.33	+1.7
152,206	-		SO_A0163	0.38	+1.6
152,209	-		SO_A0163	0.39	-1.0
152,243	+		SO_A0163	0.45	+0.6
152,266	+		SO_A0163	0.48	-1.6
152,266	+		SO_A0163	0.48	+0.9
152,269	-		SO_A0163	0.49	+0.2
152,274	-		SO_A0163	0.50	-0.5
152,321	+		SO_A0163	0.58	+0.4
152,322	+		SO_A0163	0.58	-1.3
152,329	-		SO_A0163	0.59	-0.5
152,330	-		SO_A0163	0.59	+1.1
152,331	+		SO_A0163	0.60	-0.2
152,373	-		SO_A0163	0.67	-1.0
152,377	-		SO_A0163	0.68	-1.0
152,392	-		SO_A0163	0.70	-0.3
152,396	+		SO_A0163	0.71	+0.1
152,402	+		SO_A0163	0.72	+1.0
152,407	+		SO_A0163	0.73	+0.4
152,417	+		SO_A0163	0.74	+0.3
152,421	+		SO_A0163	0.75	-0.4
152,425	-		SO_A0163	0.76	+0.8
152,436	+		SO_A0163	0.78	-0.3
152,436	+		SO_A0163	0.78	+0.6
152,438	-		SO_A0163	0.78	+3.9
152,444	+		SO_A0163	0.79	-1.1
152,445	+		SO_A0163	0.79	+1.3
152,445	+		SO_A0163	0.79	+0.8
152,450	+		SO_A0163	0.80	+2.0
152,450	+		SO_A0163	0.80	-1.2
152,453	-		SO_A0163	0.81	+0.8
152,458	-		SO_A0163	0.81	+0.9
152,458	-		SO_A0163	0.81	-0.5
152,458	-		SO_A0163	0.81	+0.0
152,516	+				+0.6
152,516	+				+2.5
152,524	-				-1.9
152,574	+				+1.2
152,574	+				+0.2
152,574	+				-2.0
152,574	+				-1.1
152,574	+				-2.5
152,574	+				-0.6
152,580	+				-0.7
152,580	+				-1.3
152,580	+				-2.3
152,580	+				+0.1
152,580	+				+2.5
152,580	+				-1.8
152,580	+				+0.6
152,580	+				-1.2
152,580	+				+1.4
152,580	+				-0.6
152,581	+				+0.9
152,581	+				-0.6
152,582	-				-0.7
152,582	-				+0.2
152,582	-				-0.4
152,582	-				-1.3
152,582	-				-1.6
152,582	-				-0.2
152,582	-				+0.1
152,582	-				-1.2
152,582	-				+0.3
152,582	-				+0.5
152,582	-				+1.2
152,582	-				+0.0
152,588	-				+1.5
152,588	-				-0.1
152,588	-				+0.8
152,588	-				-0.0
152,588	-				+1.8
152,588	-				-0.7
152,588	-				+1.1
152,588	-				-3.4
152,606	-				-0.3
152,611	-				-0.4
152,638	+				+0.8
152,638	+				-0.7
152,688	-				-0.2
152,703	+				-0.2
152,704	+				+0.4
152,704	+				+0.9
152,704	+				-1.9
152,704	+				+2.8
152,704	+				+1.2
152,712	-				+0.4
152,712	-				-0.6
152,712	-				+1.6
152,712	-				-0.3
152,717	-				+0.7
152,717	-				+0.3
152,719	+				-0.6
152,719	+				+1.3
152,727	-		SOA0164	0.11	-2.2
152,731	+		SOA0164	0.11	-1.0
152,731	+		SOA0164	0.11	+0.6
152,732	-		SOA0164	0.11	-1.4
152,739	-		SOA0164	0.12	+1.3
152,739	-		SOA0164	0.12	-1.0
152,741	+		SOA0164	0.12	-0.1
152,751	+		SOA0164	0.13	+0.6
152,754	-		SOA0164	0.13	-0.3
152,759	-		SOA0164	0.13	-0.7
152,770	+		SOA0164	0.14	+1.0
152,810	-		SOA0164	0.18	-0.8
152,813	+		SOA0164	0.18	-3.1
152,835	+		SOA0164	0.20	+0.9
152,836	-		SOA0164	0.20	-1.5
152,913	+		SOA0164	0.27	-1.5
152,913	+		SOA0164	0.27	-1.8
152,913	+		SOA0164	0.27	+0.5
152,913	+		SOA0164	0.27	+0.9
152,921	-		SOA0164	0.27	-1.6
152,932	+		SOA0164	0.28	+0.2
152,935	+		SOA0164	0.29	-1.0
153,019	+		SOA0164	0.36	+0.2
153,028	+		SOA0164	0.37	+1.0
153,031	-		SOA0164	0.37	-0.5
153,031	-		SOA0164	0.37	-1.9
153,034	-		SOA0164	0.37	-0.2
153,050	+		SOA0164	0.39	+0.2
153,050	+		SOA0164	0.39	-0.5
153,102	-		SOA0164	0.43	-1.9
153,148	+		SOA0164	0.47	+3.2
153,160	-		SOA0164	0.48	-0.0
153,176	+		SOA0164	0.49	-3.2
153,184	-		SOA0164	0.50	-0.1
153,223	+		SOA0164	0.54	-0.8
153,223	+		SOA0164	0.54	+1.9
153,223	+		SOA0164	0.54	-1.5
153,223	+		SOA0164	0.54	+0.2
153,226	-		SOA0164	0.54	-2.0
153,231	-		SOA0164	0.54	+2.3
153,231	-		SOA0164	0.54	-0.8
153,238	-		SOA0164	0.55	-0.4
153,332	+		SOA0164	0.63	+1.2
153,347	-		SOA0164	0.64	+0.4
153,347	-		SOA0164	0.64	-1.4
153,367	+		SOA0164	0.66	+1.9
153,393	+		SOA0164	0.68	-1.6
153,393	+		SOA0164	0.68	-0.1
153,393	+		SOA0164	0.68	-2.2
153,393	+		SOA0164	0.68	-0.9
153,401	-		SOA0164	0.69	+0.9
153,401	-		SOA0164	0.69	-2.6
153,401	-		SOA0164	0.69	-0.6
153,401	-		SOA0164	0.69	-0.2
153,401	-		SOA0164	0.69	-1.6
153,402	-		SOA0164	0.69	-2.7
153,413	-		SOA0164	0.70	-2.3
153,444	-		SOA0164	0.73	+0.4
153,450	+		SOA0164	0.73	-2.3
153,451	-		SOA0164	0.73	-0.3
153,451	-		SOA0164	0.73	-2.0
153,453	-		SOA0164	0.74	-1.3
153,453	-		SOA0164	0.74	-1.4
153,458	-		SOA0164	0.74	-0.3
153,514	+		SOA0164	0.79	-1.8
153,514	+		SOA0164	0.79	-1.1
153,516	+		SOA0164	0.79	-0.4
153,516	+		SOA0164	0.79	-1.0
153,516	+		SOA0164	0.79	-1.0
153,517	-		SOA0164	0.79	+0.5
153,522	-		SOA0164	0.80	-1.7
153,522	-		SOA0164	0.80	-1.7
153,522	-				+0.5
153,522	-		SOA0164	0.80	-2.6
153,524	-		SOA0164	0.80	-2.3
153,524	-		SOA0164	0.80	-1.0
153,524	-		SOA0164	0.80	+0.6
153,529	-		SOA0164	0.80	+0.9
153,560	-		SOA0164	0.83	+0.7
153,561	-		SOA0164	0.83	-2.6