Experiment: L-Malic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dshi_4129 and Dshi_4130 are separated by 395 nucleotides
Dshi_4129: Dshi_4129 - polysaccharide biosynthesis protein (RefSeq), at 60,514 to 61,947
_4129
Dshi_4130: Dshi_4130 - Parallel beta-helix repeat (RefSeq), at 62,343 to 64,739
_4130
Position (kb) 62
63
64
65 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 61.344 kb on - strand, within Dshi_4129 at 61.393 kb on - strand, within Dshi_4129 at 61.411 kb on + strand, within Dshi_4129 at 61.477 kb on + strand, within Dshi_4129 at 61.511 kb on + strand, within Dshi_4129 at 61.609 kb on - strand, within Dshi_4129 at 61.609 kb on - strand, within Dshi_4129 at 61.622 kb on + strand, within Dshi_4129 at 61.640 kb on - strand, within Dshi_4129 at 61.640 kb on - strand, within Dshi_4129 at 61.650 kb on + strand, within Dshi_4129 at 61.663 kb on - strand, within Dshi_4129 at 61.663 kb on - strand, within Dshi_4129 at 61.671 kb on + strand, within Dshi_4129 at 61.675 kb on - strand, within Dshi_4129 at 61.675 kb on - strand, within Dshi_4129 at 61.700 kb on + strand, within Dshi_4129 at 61.700 kb on + strand, within Dshi_4129 at 61.700 kb on + strand, within Dshi_4129 at 61.727 kb on - strand, within Dshi_4129 at 61.749 kb on - strand, within Dshi_4129 at 61.777 kb on + strand, within Dshi_4129 at 61.788 kb on + strand, within Dshi_4129 at 61.809 kb on + strand at 61.817 kb on - strand at 61.841 kb on - strand at 61.898 kb on + strand at 61.908 kb on + strand at 61.908 kb on + strand at 61.908 kb on + strand at 61.911 kb on - strand at 61.911 kb on - strand at 61.916 kb on - strand at 61.916 kb on - strand at 61.937 kb on + strand at 61.937 kb on + strand at 61.945 kb on - strand at 61.945 kb on - strand at 61.984 kb on - strand at 62.006 kb on - strand at 62.017 kb on + strand at 62.026 kb on - strand at 62.037 kb on - strand at 62.063 kb on + strand at 62.071 kb on - strand at 62.071 kb on - strand at 62.071 kb on - strand at 62.076 kb on - strand at 62.090 kb on - strand at 62.137 kb on - strand at 62.137 kb on - strand at 62.142 kb on + strand at 62.145 kb on + strand at 62.191 kb on - strand at 62.196 kb on + strand at 62.212 kb on + strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.220 kb on - strand at 62.222 kb on + strand at 62.230 kb on - strand at 62.246 kb on + strand at 62.246 kb on + strand at 62.246 kb on + strand at 62.254 kb on - strand at 62.261 kb on + strand at 62.261 kb on + strand at 62.269 kb on - strand at 62.269 kb on - strand at 62.275 kb on + strand at 62.277 kb on - strand at 62.298 kb on - strand at 62.306 kb on - strand at 62.329 kb on + strand at 62.374 kb on - strand at 64.520 kb on + strand at 64.556 kb on - strand at 64.586 kb on - strand at 64.586 kb on - strand at 64.599 kb on + strand at 64.641 kb on - strand at 64.690 kb on - strand at 65.724 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) remove 61,344 - Dshi_4129 0.58 +1.4 61,393 - Dshi_4129 0.61 -0.8 61,411 + Dshi_4129 0.63 +0.4 61,477 + Dshi_4129 0.67 -0.6 61,511 + Dshi_4129 0.70 +1.0 61,609 - Dshi_4129 0.76 +0.4 61,609 - Dshi_4129 0.76 +4.1 61,622 + Dshi_4129 0.77 +2.4 61,640 - Dshi_4129 0.79 -2.0 61,640 - Dshi_4129 0.79 +0.3 61,650 + Dshi_4129 0.79 +1.1 61,663 - Dshi_4129 0.80 -0.1 61,663 - Dshi_4129 0.80 +0.1 61,671 + Dshi_4129 0.81 +0.5 61,675 - Dshi_4129 0.81 -1.0 61,675 - Dshi_4129 0.81 -1.4 61,700 + Dshi_4129 0.83 -0.2 61,700 + Dshi_4129 0.83 -1.1 61,700 + Dshi_4129 0.83 +0.0 61,727 - Dshi_4129 0.85 -0.3 61,749 - Dshi_4129 0.86 +1.0 61,777 + Dshi_4129 0.88 -1.7 61,788 + Dshi_4129 0.89 +2.2 61,809 + +0.2 61,817 - +0.4 61,841 - -2.6 61,898 + -0.3 61,908 + +0.3 61,908 + +0.6 61,908 + -0.8 61,911 - +0.3 61,911 - +0.4 61,916 - -0.8 61,916 - +0.9 61,937 + +2.7 61,937 + +0.3 61,945 - +0.2 61,945 - -1.7 61,984 - -0.1 62,006 - +0.6 62,017 + +0.7 62,026 - +0.3 62,037 - -0.7 62,063 + +2.1 62,071 - +0.5 62,071 - +0.1 62,071 - +0.5 62,076 - +0.4 62,090 - -2.7 62,137 - +0.2 62,137 - +0.1 62,142 + +0.0 62,145 + +0.5 62,191 - +0.5 62,196 + -2.5 62,212 + -0.9 62,220 - +0.2 62,220 - -1.3 62,220 - +1.8 62,220 - +0.7 62,220 - +0.1 62,220 - +0.2 62,222 + -1.3 62,230 - +0.9 62,246 + -2.2 62,246 + +0.8 62,246 + -0.4 62,254 - +0.8 62,261 + -0.1 62,261 + +0.1 62,269 - -0.5 62,269 - -1.9 62,275 + -1.0 62,277 - +0.4 62,298 - -0.8 62,306 - +0.1 62,329 + -0.2 62,374 - -0.4 64,520 + -1.1 64,556 - +0.1 64,586 - -1.1 64,586 - -0.3 64,599 + +0.1 64,641 - +0.1 64,690 - -0.5 65,724 + +1.7
Or see this region's nucleotide sequence