Strain Fitness in Dinoroseobacter shibae DFL-12 around Dshi_0988

Experiment: L-Malic (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C)
1,006,144	+		Dshi_0986	0.36	+0.5
1,006,152	-		Dshi_0986	0.38	-2.5
1,006,152	-		Dshi_0986	0.38	+1.0
1,006,168	-		Dshi_0986	0.42	+0.7
1,006,400	+				-0.4
1,006,549	+		Dshi_0987	0.48	-0.1
1,006,585	-		Dshi_0987	0.58	+0.6
1,006,664	-		Dshi_0987	0.80	+0.0
1,006,723	-				-0.0
1,006,844	+				+0.0
1,006,943	+				-0.3
1,007,004	+				+0.3
1,007,027	+				+0.1
1,007,105	-				+0.7
1,007,184	-		Dshi_0988	0.11	-0.1
1,007,337	+		Dshi_0988	0.25	+0.4
1,007,356	-		Dshi_0988	0.27	+1.2
1,007,391	+		Dshi_0988	0.30	-0.0
1,007,419	+		Dshi_0988	0.33	+0.7
1,007,437	-		Dshi_0988	0.34	+0.0
1,007,462	+		Dshi_0988	0.36	+0.4
1,007,467	+		Dshi_0988	0.37	-2.0
1,007,475	-		Dshi_0988	0.38	+0.3
1,007,495	-		Dshi_0988	0.39	+0.2
1,007,546	-		Dshi_0988	0.44	+1.5
1,007,571	-		Dshi_0988	0.46	+1.1
1,007,592	-		Dshi_0988	0.48	+0.4
1,007,659	-		Dshi_0988	0.54	+0.7
1,007,673	+		Dshi_0988	0.55	+0.5
1,007,673	+		Dshi_0988	0.55	+2.4
1,007,673	+		Dshi_0988	0.55	-0.3
1,007,681	-		Dshi_0988	0.56	-0.7
1,007,681	-		Dshi_0988	0.56	-0.0
1,007,727	+		Dshi_0988	0.60	+1.0
1,007,749	+		Dshi_0988	0.62	+1.2
1,007,749	+		Dshi_0988	0.62	-0.0
1,007,843	+		Dshi_0988	0.71	+0.3
1,007,939	+		Dshi_0988	0.79	-0.1
1,007,951	-		Dshi_0988	0.80	+1.1
1,008,005	+		Dshi_0988	0.85	+0.3
1,008,035	-		Dshi_0988	0.88	+0.9
1,008,154	+				+1.6
1,008,209	+				-1.2
1,008,230	+		Dshi_0989	0.15	+0.3
1,008,348	+		Dshi_0989	0.64	+0.2
1,008,361	-		Dshi_0989	0.69	-0.1
1,008,378	-		Dshi_0989	0.76	-2.7
1,008,395	+		Dshi_0989	0.83	-0.3
1,008,431	-				-0.1
1,008,435	+				-0.7
1,008,435	+				-1.4
1,008,442	+				-0.2
1,008,459	+				+0.5
1,008,459	+				+0.1
1,008,465	+				+0.3
1,008,467	-				-0.8
1,008,467	-				+0.1
1,008,467	-				-0.9
1,008,486	+				+0.5
1,008,486	-				+1.3
1,008,493	+				+0.1
1,008,501	-				-0.3
1,008,501	-				+0.3
1,008,507	+				-0.5
1,008,507	+				+1.3
1,008,507	+				+2.5
1,008,507	+				-0.1
1,008,507	+				-0.0
1,008,512	+				+0.7
1,008,512	+				+0.3
1,008,512	+				-0.1
1,008,513	+				-0.7
1,008,515	-				+0.6
1,008,515	-				+0.5
1,008,515	-				+1.2
1,008,515	-				+0.9
1,008,515	-				+0.1
1,008,515	-				-0.5
1,008,515	-				-0.5
1,008,515	-				-2.9
1,008,515	-				-0.4
1,008,515	-				+0.4
1,008,515	-				-1.2
1,008,515	-				+0.3
1,008,515	-				+0.7
1,008,515	-				+0.1
1,008,520	-				+0.9
1,008,523	+				+0.0
1,008,523	+				-0.2
1,008,563	+				-0.1
1,008,565	+				-2.5
1,008,579	-				+0.5
1,008,609	-				+1.0
1,008,660	+				+1.1
1,008,667	+				-0.3
1,008,668	-				-0.0
1,008,707	+				-0.6
1,008,709	+				+0.6
1,008,709	+				+0.2
1,008,709	+				+0.2
1,008,715	-				-0.3
1,008,715	-				-0.2
1,008,729	-				+0.1
1,008,740	-				+0.5
1,008,748	+				-0.1
1,008,750	+				+0.1
1,008,753	-				+0.4
1,008,772	+				+0.2
1,008,779	-				+0.0
1,008,787	+				-0.4
1,008,787	+				-0.2
1,008,795	-				+0.2
1,008,795	-				+0.3
1,008,795	-				-0.6
1,008,797	+				-3.7
1,008,797	+				+0.3
1,008,797	+				+0.1
1,008,797	+				-0.6
1,008,797	+				+0.1
1,008,797	+				+0.1
1,008,797	+				+0.5
1,008,797	+				+0.5
1,008,800	+				-0.4
1,008,800	+				-0.6
1,008,805	-				+0.1
1,008,805	-				-0.1
1,008,805	-				-0.1
1,008,805	-				+0.7
1,008,808	-				-2.3
1,008,808	-				+0.8
1,008,808	-				+0.4
1,008,808	-				+0.5
1,008,808	-				+0.9
1,008,808	-				+0.4
1,008,813	+				+0.3
1,008,818	+				+0.6
1,008,818	-				+1.0
1,008,821	-				+0.7
1,008,821	-				-1.6
1,008,821	-				-0.6
1,008,823	+				-0.4
1,008,823	+				+0.9
1,008,823	+				+1.1
1,008,823	+				-0.3
1,008,823	+				+0.4
1,008,823	+				+0.5
1,008,825	+				-0.2
1,008,825	+				+0.6
1,008,831	-				+0.1
1,008,831	-				-0.1
1,008,831	-				-0.6
1,008,831	-				+0.6
1,008,833	-				-0.5
1,008,833	-				+0.5
1,008,835	+				+0.5
1,008,835	+				-0.1
1,008,835	+				+1.1
1,008,835	+				-3.2
1,008,835	+				-1.2
1,008,835	+				-0.1
1,008,835	+				+0.3
1,008,835	+				+0.5
1,008,835	+				+0.8
1,008,835	+				+0.3
1,008,835	+				+1.2
1,008,835	+				-1.6
1,008,835	+				-1.0
1,008,835	+				-0.9
1,008,835	+				+2.3
1,008,835	+				+0.1
1,008,835	+				-0.3
1,008,835	+				+0.4
1,008,835	+				+0.6
1,008,835	+				+0.1
1,008,837	+				+0.1
1,008,843	-				+0.0
1,008,843	-				+0.1
1,008,843	-				-0.4
1,008,843	-				-0.7
1,008,843	-				+0.1
1,008,843	-				-0.5
1,008,843	-				-0.8
1,008,843	-				+0.7
1,008,843	-				+0.8
1,008,843	-				+0.8
1,008,843	-				-2.5
1,008,843	-				+0.7
1,008,843	-				+0.0
1,008,843	-				-0.1
1,008,843	-				+0.5
1,008,843	-				+0.0
1,008,843	-				+0.5
1,008,843	-				+0.1
1,008,843	-				+0.1
1,008,843	-				-0.1
1,008,859	+				+0.3
1,008,909	+				+0.5
1,008,927	-				+0.4
1,008,927	-				+1.4
1,008,944	-				+1.5
1,008,944	-				+0.5
1,008,945	-				+0.6
1,008,945	-				-0.6
1,008,945	-				+0.1
1,008,957	-				-0.1
1,008,957	-				+1.4
1,008,960	+				-1.1
1,008,970	-				+0.1
1,008,977	+				+0.2
1,008,977	+				-0.3
1,008,982	+				-0.1
1,008,982	+				+0.4
1,008,982	+				-0.1
1,008,985	-				-0.6
1,008,990	-				+0.8
1,009,014	-				+1.2
1,009,018	+				-0.2
1,009,024	-				+1.4
1,009,030	-				-1.7
1,009,064	+				+0.5
1,009,064	+				-0.3
1,009,064	+				-0.5
1,009,064	+				-0.3
1,009,072	-				-2.2
1,009,072	-				-0.4
1,009,072	-				+0.6
1,009,072	-				+0.1
1,009,079	+				-0.1
1,009,079	+				-0.4
1,009,086	-				+0.4
1,009,090	-				-2.1
1,009,114	+				-0.2
1,009,122	+				+1.4
1,009,136	+				+0.8
1,009,136	+				+1.2
1,009,136	+				+0.8
1,009,136	+				+0.4
1,009,136	+				+0.3
1,009,136	+				-0.4
1,009,136	+				+0.7
1,009,136	+				+2.1
1,009,136	+				+0.4
1,009,136	+				+0.3
1,009,136	+				+0.4
1,009,136	+				+0.7
1,009,144	-				+0.6
1,009,144	-				+0.5
1,009,144	-				+0.8
1,009,144	-				+0.1
1,009,144	-				-0.7
1,009,144	-				-2.5
1,009,144	-				+0.4
1,009,144	-				-0.3
1,009,144	-				+0.1
1,009,144	-				+0.4
1,009,144	-				+0.3
1,009,144	-				+0.3
1,009,144	-				+0.6
1,009,144	-				+1.1
1,009,144	-				-0.3
1,009,144	-				+0.1
1,009,144	-				+1.5
1,009,144	-				+0.2
1,009,144	-				+0.4
1,009,144	-				-1.0
1,009,144	-				+0.2
1,009,144	-				+0.1
1,009,151	+				+0.8
1,009,155	+				+1.1
1,009,155	+				+0.4