Strain Fitness in Shewanella oneidensis MR-1 around SO4217

Experiment: M2 center

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntftsA and ftsQ overlap by 20 nucleotidesftsQ and murC are separated by 111 nucleotides SO4216: ftsA - cell division protein FtsA (NCBI ptt file), at 4,389,565 to 4,390,800 ftsA SO4217: ftsQ - cell division protein FtsQ (NCBI ptt file), at 4,390,781 to 4,391,569 ftsQ SO4218: murC - UDP-N-acetylmuramate--alanine ligase (NCBI ptt file), at 4,391,681 to 4,393,147 murC Position (kb) 4390 4391 4392Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 4391.739 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction M2 center
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4,391,739 - -5.4

Or see this region's nucleotide sequence