Strain Fitness in Shewanella oneidensis MR-1 around SO1081

Experiment: LB 10C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 10C
1,121,418	+				-0.2
1,121,418	+				-0.5
1,121,419	+				+0.3
1,121,419	+				+0.2
1,121,419	+				+0.0
1,121,419	+				+0.0
1,121,419	+				-0.2
1,121,419	+				-0.0
1,121,419	+				-0.3
1,121,419	+				-0.3
1,121,419	+				-0.8
1,121,419	+				+0.7
1,121,419	+				+2.2
1,121,419	+				-1.1
1,121,419	+				-0.3
1,121,419	+				+1.2
1,121,419	+				+0.3
1,121,419	+				+0.5
1,121,419	+				-0.4
1,121,419	+				+0.3
1,121,419	+				-0.1
1,121,419	+				+0.3
1,121,419	+				+0.0
1,121,419	+				-0.1
1,121,419	+				+0.7
1,121,419	+				-0.9
1,121,419	+				-1.1
1,121,419	+				+0.1
1,121,419	+				-0.3
1,121,419	+				-0.8
1,121,419	+				-0.5
1,121,419	+				-0.4
1,121,419	+				-0.1
1,121,419	+				+0.8
1,121,419	+				+0.4
1,121,419	+				-0.6
1,121,419	+				-0.2
1,121,419	+				+0.7
1,121,419	+				+1.2
1,121,419	+				-0.0
1,121,419	+				-0.3
1,121,419	+				+0.3
1,121,419	+				-0.4
1,121,419	+				+0.3
1,121,419	+				-0.8
1,121,419	+				-0.5
1,121,419	+				+0.2
1,121,424	+				+0.8
1,121,442	+				-0.6
1,121,450	-				+0.2
1,121,454	-				+0.1
1,121,498	+				+0.2
1,121,557	+				-0.6
1,121,564	-				-0.9
1,121,566	+				-0.6
1,121,566	+				-0.1
1,121,566	+				-0.5
1,121,566	+				-0.2
1,121,566	+				-0.6
1,121,566	+				-0.8
1,121,566	+				+0.4
1,121,566	+				+0.4
1,121,566	+				-0.1
1,121,574	-				+2.0
1,121,574	-				+0.2
1,121,574	-				-1.0
1,121,576	+				+0.2
1,121,584	-				-0.1
1,121,589	-				+0.5
1,121,589	-				-0.4
1,121,599	+				-0.0
1,121,599	+				-0.3
1,121,656	-				+2.0
1,121,658	+				-0.2
1,121,658	+				-0.0
1,121,658	+				-0.1
1,121,659	+				-0.4
1,121,666	-				+0.0
1,121,666	-				+0.1
1,121,666	-				-0.4
1,121,666	-				-0.4
1,121,684	+				+0.6
1,121,685	-				-0.0
1,121,692	+				-0.2
1,121,692	+				-0.1
1,121,692	+				+0.3
1,121,692	+				-0.4
1,121,692	+				+1.2
1,121,692	+				+0.1
1,121,700	-				-0.1
1,121,700	-				+0.2
1,121,700	-				+1.0
1,121,723	+				-0.6
1,121,779	+				+0.2
1,121,787	+				+0.1
1,121,795	-				-0.2
1,121,816	+				+0.3
1,121,825	+				-0.0
1,121,833	-				+0.8
1,121,847	+				-1.2
1,121,851	+				-0.2
1,121,852	+				+1.6
1,121,852	+				-0.4
1,121,852	+				-0.1
1,121,855	-				-0.6
1,121,860	-		SO1081	0.10	-2.1
1,121,860	-		SO1081	0.10	-0.7
1,121,862	+		SO1081	0.11	+0.1
1,121,867	+		SO1081	0.11	-0.1
1,121,867	+		SO1081	0.11	-0.0
1,121,893	+		SO1081	0.13	-0.5
1,121,903	+		SO1081	0.14	-0.7
1,121,921	-		SO1081	0.15	+0.1
1,121,929	+		SO1081	0.16	-0.2
1,121,935	-		SO1081	0.17	-1.0
1,121,937	-		SO1081	0.17	-0.9
1,122,017	+		SO1081	0.24	-0.9
1,122,017	+		SO1081	0.24	-0.6
1,122,017	+		SO1081	0.24	-1.2
1,122,017	+		SO1081	0.24	-1.2
1,122,017	+		SO1081	0.24	-0.2
1,122,017	+		SO1081	0.24	+0.8
1,122,025	-		SO1081	0.24	-0.5
1,122,066	+		SO1081	0.28	-0.2
1,122,093	+		SO1081	0.30	-0.8
1,122,101	-		SO1081	0.31	+0.2
1,122,121	+		SO1081	0.32	+0.0
1,122,121	-		SO1081	0.32	+0.4
1,122,143	+		SO1081	0.34	+0.4
1,122,151	+		SO1081	0.35	-1.1
1,122,151	-		SO1081	0.35	+0.1
1,122,178	+		SO1081	0.37	-0.6
1,122,186	-		SO1081	0.38	-0.4
1,122,186	-		SO1081	0.38	+0.8
1,122,186	-		SO1081	0.38	-0.5
1,122,189	+		SO1081	0.38	+0.1
1,122,189	+		SO1081	0.38	-0.4
1,122,196	+		SO1081	0.39	-0.8
1,122,196	+		SO1081	0.39	-0.6
1,122,196	+		SO1081	0.39	-0.0
1,122,196	+		SO1081	0.39	-0.0
1,122,196	+		SO1081	0.39	-0.7
1,122,196	+		SO1081	0.39	+0.2
1,122,196	+		SO1081	0.39	-0.0
1,122,196	+		SO1081	0.39	-0.7
1,122,196	+		SO1081	0.39	-0.1
1,122,196	-		SO1081	0.39	-0.1
1,122,197	-		SO1081	0.39	+0.2
1,122,201	+		SO1081	0.39	+0.5
1,122,201	+		SO1081	0.39	+0.8
1,122,204	-		SO1081	0.39	+0.6
1,122,204	-		SO1081	0.39	-0.6
1,122,204	-		SO1081	0.39	+0.2
1,122,204	-		SO1081	0.39	-0.4
1,122,204	-		SO1081	0.39	-0.8
1,122,204	-		SO1081	0.39	+0.1
1,122,209	-		SO1081	0.40	+0.3
1,122,209	-		SO1081	0.40	-0.0
1,122,213	+		SO1081	0.40	-0.8
1,122,213	+		SO1081	0.40	-1.1
1,122,213	+		SO1081	0.40	+0.7
1,122,213	+		SO1081	0.40	+0.7
1,122,218	-		SO1081	0.40	-0.3
1,122,218	-		SO1081	0.40	+0.4
1,122,221	-		SO1081	0.41	-0.3
1,122,279	+		SO1081	0.45	+0.2
1,122,302	-		SO1081	0.47	-0.1
1,122,316	+		SO1081	0.49	-0.6
1,122,337	+		SO1081	0.50	-0.1
1,122,343	+		SO1081	0.51	-0.0
1,122,353	+		SO1081	0.52	+0.2
1,122,353	+		SO1081	0.52	+0.3
1,122,359	+		SO1081	0.52	-0.2
1,122,361	-		SO1081	0.52	-0.5
1,122,361	-		SO1081	0.52	+0.6
1,122,364	+		SO1081	0.53	-0.4
1,122,366	-		SO1081	0.53	-0.6
1,122,372	+		SO1081	0.53	-0.4
1,122,380	-		SO1081	0.54	+0.2
1,122,380	-		SO1081	0.54	-0.1
1,122,406	+		SO1081	0.56	-1.1
1,122,413	+		SO1081	0.57	-0.1
1,122,421	-		SO1081	0.57	-0.2
1,122,421	-		SO1081	0.57	-1.2
1,122,465	-		SO1081	0.61	-0.3
1,122,465	-		SO1081	0.61	-0.2
1,122,527	+		SO1081	0.66	-0.6
1,122,527	+		SO1081	0.66	+0.1
1,122,528	+		SO1081	0.66	+0.6
1,122,535	-		SO1081	0.67	-0.2
1,122,535	-		SO1081	0.67	+0.9
1,122,535	-		SO1081	0.67	+0.0
1,122,535	-		SO1081	0.67	-0.3
1,122,537	+		SO1081	0.67	-0.4
1,122,552	+		SO1081	0.68	-1.1
1,122,561	+		SO1081	0.69	+1.2
1,122,589	+		SO1081	0.71	-0.2
1,122,704	-		SO1081	0.81	-0.5
1,122,727	-		SO1081	0.83	-0.0
1,122,762	-		SO1081	0.86	-0.5
1,122,774	+		SO1081	0.87	-1.0
1,122,774	+		SO1081	0.87	-0.3
1,122,774	+		SO1081	0.87	-0.3
1,122,782	-		SO1081	0.88	+0.2
1,122,799	-		SO1081	0.89	-1.1
1,122,804	-		SO1081	0.89	-0.6
1,122,805	-		SO1081	0.90	-0.5
1,122,806	-		SO1081	0.90	-0.2
1,122,808	+		SO1081	0.90	-0.1
1,122,833	-				-0.2
1,122,881	+				-1.0
1,122,883	-				+0.1
1,122,887	+				+0.7
1,122,887	+				+0.3
1,122,895	-				+0.5
1,122,895	-				+1.3
1,122,895	-				+0.1
1,122,914	+				-0.7
1,122,915	+				+0.5
1,122,982	+				-0.0
1,122,991	+				-0.4
1,123,032	-				+0.6
1,123,037	-				-0.2
1,123,037	-				-1.5
1,123,037	-				+0.3
1,123,037	-				-0.0
1,123,037	-				+0.4
1,123,037	-				-0.4
1,123,037	-				+0.2
1,123,038	-				+0.5
1,123,042	-				+0.9