Experiment: Minimal 25C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt SO0744 and SO0745 are separated by 215 nucleotides SO0745 and SO0746 are separated by 6 nucleotides SO0746 and fpr are separated by 65 nucleotides
SO0744: SO0744 - iron(III) ABC transporter, periplasmic iron(III)-binding protein (NCBI ptt file), at 762,286 to 763,293
SO0744
SO0745: SO0745 - hypothetical protein (NCBI ptt file), at 763,509 to 763,928
SO0745
SO0746: SO0746 - glutathione S-transferase family protein (NCBI ptt file), at 763,935 to 764,531
SO0746
SO0747: fpr - ferredoxin--NADP reductase (NCBI ptt file), at 764,597 to 765,346
fpr
Position (kb) 763
764 Strain fitness (log2 ratio) -2
-1
0
1
2 at 762.639 kb on + strand, within SO0744 at 762.649 kb on - strand, within SO0744 at 762.686 kb on + strand, within SO0744 at 762.694 kb on - strand, within SO0744 at 762.755 kb on + strand, within SO0744 at 762.763 kb on - strand, within SO0744 at 762.763 kb on - strand, within SO0744 at 762.775 kb on - strand, within SO0744 at 762.819 kb on + strand, within SO0744 at 762.985 kb on - strand, within SO0744 at 763.015 kb on + strand, within SO0744 at 763.179 kb on - strand, within SO0744 at 763.272 kb on - strand at 763.319 kb on + strand at 763.343 kb on - strand at 763.384 kb on - strand at 763.406 kb on - strand at 763.531 kb on + strand at 763.545 kb on - strand at 763.626 kb on + strand, within SO0745 at 763.634 kb on - strand, within SO0745 at 763.634 kb on - strand, within SO0745 at 763.636 kb on - strand, within SO0745 at 763.649 kb on - strand, within SO0745 at 763.698 kb on + strand, within SO0745 at 763.781 kb on - strand, within SO0745 at 763.811 kb on + strand, within SO0745 at 763.811 kb on + strand, within SO0745 at 763.898 kb on + strand at 763.906 kb on - strand at 763.932 kb on + strand at 763.940 kb on - strand at 763.979 kb on + strand at 764.067 kb on + strand, within SO0746 at 764.075 kb on - strand, within SO0746 at 764.236 kb on - strand, within SO0746 at 764.271 kb on + strand, within SO0746 at 764.271 kb on + strand, within SO0746 at 764.271 kb on + strand, within SO0746 at 764.271 kb on + strand, within SO0746 at 764.271 kb on + strand, within SO0746 at 764.271 kb on + strand, within SO0746 at 764.279 kb on - strand, within SO0746 at 764.279 kb on - strand, within SO0746 at 764.279 kb on - strand, within SO0746 at 764.279 kb on - strand, within SO0746 at 764.404 kb on - strand, within SO0746 at 764.416 kb on + strand, within SO0746 at 764.437 kb on + strand, within SO0746 at 764.496 kb on + strand at 764.497 kb on + strand at 764.497 kb on + strand at 764.505 kb on - strand at 764.510 kb on - strand at 764.682 kb on + strand, within fpr at 764.716 kb on + strand, within fpr at 764.778 kb on - strand, within fpr at 764.829 kb on + strand, within fpr at 764.829 kb on + strand, within fpr at 764.837 kb on - strand, within fpr at 764.897 kb on + strand, within fpr at 764.897 kb on + strand, within fpr at 764.899 kb on - strand, within fpr at 764.905 kb on - strand, within fpr at 764.916 kb on + strand, within fpr at 764.916 kb on + strand, within fpr at 764.916 kb on + strand, within fpr at 764.916 kb on + strand, within fpr at 764.916 kb on + strand, within fpr at 764.924 kb on - strand, within fpr at 764.924 kb on - strand, within fpr
Per-strain Table
Position Strand Gene LocusTag Fraction Minimal 25C remove 762,639 + SO0744 0.35 -0.2 762,649 - SO0744 0.36 -0.5 762,686 + SO0744 0.40 +0.3 762,694 - SO0744 0.40 -1.0 762,755 + SO0744 0.47 -0.4 762,763 - SO0744 0.47 +2.0 762,763 - SO0744 0.47 -0.2 762,775 - SO0744 0.49 +0.3 762,819 + SO0744 0.53 +1.3 762,985 - SO0744 0.69 -0.2 763,015 + SO0744 0.72 -0.4 763,179 - SO0744 0.89 +0.1 763,272 - +0.6 763,319 + +0.8 763,343 - +0.2 763,384 - +0.5 763,406 - -0.5 763,531 + -0.1 763,545 - +0.0 763,626 + SO0745 0.28 +1.1 763,634 - SO0745 0.30 +0.6 763,634 - SO0745 0.30 -1.9 763,636 - SO0745 0.30 +0.2 763,649 - SO0745 0.33 +0.3 763,698 + SO0745 0.45 +0.7 763,781 - SO0745 0.65 +0.5 763,811 + SO0745 0.72 +0.4 763,811 + SO0745 0.72 +0.4 763,898 + -0.1 763,906 - -0.4 763,932 + +0.3 763,940 - +0.3 763,979 + +0.1 764,067 + SO0746 0.22 -0.3 764,075 - SO0746 0.23 -0.0 764,236 - SO0746 0.50 -0.3 764,271 + SO0746 0.56 +0.0 764,271 + SO0746 0.56 +0.2 764,271 + SO0746 0.56 +0.7 764,271 + SO0746 0.56 +0.3 764,271 + SO0746 0.56 -0.1 764,271 + SO0746 0.56 -0.4 764,279 - SO0746 0.58 -1.4 764,279 - SO0746 0.58 +0.7 764,279 - SO0746 0.58 +0.7 764,279 - SO0746 0.58 +0.2 764,404 - SO0746 0.79 +0.1 764,416 + SO0746 0.81 -0.0 764,437 + SO0746 0.84 +0.0 764,496 + +0.2 764,497 + -0.4 764,497 + -0.2 764,505 - +0.2 764,510 - -0.1 764,682 + fpr SO0747 0.11 -0.0 764,716 + fpr SO0747 0.16 -0.8 764,778 - fpr SO0747 0.24 +0.3 764,829 + fpr SO0747 0.31 +0.5 764,829 + fpr SO0747 0.31 +0.1 764,837 - fpr SO0747 0.32 +0.3 764,897 + fpr SO0747 0.40 +0.1 764,897 + fpr SO0747 0.40 +0.1 764,899 - fpr SO0747 0.40 -0.2 764,905 - fpr SO0747 0.41 -0.6 764,916 + fpr SO0747 0.43 +0.4 764,916 + fpr SO0747 0.43 +0.2 764,916 + fpr SO0747 0.43 +0.8 764,916 + fpr SO0747 0.43 -0.4 764,916 + fpr SO0747 0.43 +0.6 764,924 - fpr SO0747 0.44 -0.2 764,924 - fpr SO0747 0.44 +0.1
Or see this region's nucleotide sequence