Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c33700

Experiment: m.b. Choline Lysine 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Choline Lysine 3 mM
3,531,986	+				-0.1
3,531,986	+				-0.3
3,532,039	+				-0.9
3,532,044	-				-0.6
3,532,047	-				-1.6
3,532,056	+				+1.5
3,532,064	-				+1.3
3,532,108	-				+1.2
3,532,123	+				-0.3
3,532,221	+		PGA1_c33700	0.13	+0.2
3,532,222	+		PGA1_c33700	0.13	+1.2
3,532,227	+		PGA1_c33700	0.13	+0.7
3,532,242	-		PGA1_c33700	0.14	-0.2
3,532,244	+		PGA1_c33700	0.14	-0.5
3,532,244	+		PGA1_c33700	0.14	-0.7
3,532,252	-		PGA1_c33700	0.15	+1.3
3,532,252	-		PGA1_c33700	0.15	-0.4
3,532,281	-		PGA1_c33700	0.17	+0.5
3,532,281	-		PGA1_c33700	0.17	+0.6
3,532,290	+		PGA1_c33700	0.17	+1.1
3,532,299	+		PGA1_c33700	0.18	-1.6
3,532,309	+		PGA1_c33700	0.18	+0.6
3,532,445	+		PGA1_c33700	0.27	+1.5
3,532,445	+		PGA1_c33700	0.27	-0.3
3,532,455	+		PGA1_c33700	0.27	+0.3
3,532,455	+		PGA1_c33700	0.27	-0.3
3,532,467	+		PGA1_c33700	0.28	-0.2
3,532,467	+		PGA1_c33700	0.28	-1.6
3,532,467	+		PGA1_c33700	0.28	-0.8
3,532,475	-		PGA1_c33700	0.29	+0.5
3,532,508	-		PGA1_c33700	0.31	+1.1
3,532,511	+		PGA1_c33700	0.31	+1.2
3,532,511	+		PGA1_c33700	0.31	+0.1
3,532,532	+		PGA1_c33700	0.32	-0.5
3,532,585	+		PGA1_c33700	0.36	+0.7
3,532,593	-		PGA1_c33700	0.36	+0.7
3,532,596	+		PGA1_c33700	0.36	+0.7
3,532,599	+		PGA1_c33700	0.36	+0.1
3,532,629	-		PGA1_c33700	0.38	-1.1
3,532,634	-		PGA1_c33700	0.39	+0.8
3,532,646	-		PGA1_c33700	0.39	-0.8
3,532,667	+		PGA1_c33700	0.41	+0.6
3,532,675	-		PGA1_c33700	0.41	+0.5
3,532,675	-		PGA1_c33700	0.41	+0.6
3,532,680	-		PGA1_c33700	0.42	-0.3
3,532,708	-		PGA1_c33700	0.43	-0.8
3,532,720	+		PGA1_c33700	0.44	+1.2
3,532,721	+		PGA1_c33700	0.44	-0.7
3,532,723	-		PGA1_c33700	0.44	-0.4
3,532,723	-		PGA1_c33700	0.44	+0.2
3,532,723	-		PGA1_c33700	0.44	-0.0
3,532,723	-		PGA1_c33700	0.44	+0.2
3,532,726	+		PGA1_c33700	0.44	-1.0
3,532,731	+		PGA1_c33700	0.45	-0.6
3,532,747	+		PGA1_c33700	0.46	-1.3
3,532,747	+		PGA1_c33700	0.46	-0.9
3,532,767	+		PGA1_c33700	0.47	-0.7
3,532,767	+		PGA1_c33700	0.47	+0.1
3,532,767	+		PGA1_c33700	0.47	+0.5
3,532,767	+		PGA1_c33700	0.47	+0.4
3,532,767	+		PGA1_c33700	0.47	+0.3
3,532,767	+		PGA1_c33700	0.47	+1.1
3,532,767	+		PGA1_c33700	0.47	-0.8
3,532,775	-		PGA1_c33700	0.48	+0.3
3,532,775	-		PGA1_c33700	0.48	-0.1
3,532,781	-		PGA1_c33700	0.48	+0.6
3,532,807	+		PGA1_c33700	0.50	+1.3
3,532,815	-		PGA1_c33700	0.50	+0.7
3,532,862	+		PGA1_c33700	0.53	+1.3
3,532,921	+		PGA1_c33700	0.57	-0.5
3,532,932	+		PGA1_c33700	0.57	+0.4
3,532,932	+		PGA1_c33700	0.57	-1.6
3,532,998	+		PGA1_c33700	0.62	+0.1
3,533,036	-		PGA1_c33700	0.64	-0.5
3,533,054	+		PGA1_c33700	0.65	-0.2
3,533,054	+		PGA1_c33700	0.65	+0.0
3,533,054	+		PGA1_c33700	0.65	-0.3
3,533,054	+		PGA1_c33700	0.65	+0.3
3,533,054	-		PGA1_c33700	0.65	-0.8
3,533,062	-		PGA1_c33700	0.66	+1.0
3,533,062	-		PGA1_c33700	0.66	+0.5
3,533,062	-		PGA1_c33700	0.66	-0.1
3,533,087	+		PGA1_c33700	0.67	+0.8
3,533,119	+		PGA1_c33700	0.69	-1.2
3,533,119	+		PGA1_c33700	0.69	+1.3
3,533,187	+		PGA1_c33700	0.73	+1.3
3,533,187	+		PGA1_c33700	0.73	-1.9
3,533,187	+		PGA1_c33700	0.73	-1.2
3,533,192	+		PGA1_c33700	0.74	+0.4
3,533,195	-		PGA1_c33700	0.74	+0.4
3,533,195	-		PGA1_c33700	0.74	+0.7
3,533,200	-		PGA1_c33700	0.74	+1.5
3,533,200	-		PGA1_c33700	0.74	-1.5
3,533,200	-		PGA1_c33700	0.74	-0.2
3,533,200	-		PGA1_c33700	0.74	+0.9
3,533,200	-		PGA1_c33700	0.74	+1.0
3,533,200	-		PGA1_c33700	0.74	+0.9
3,533,200	-		PGA1_c33700	0.74	+1.0
3,533,200	-		PGA1_c33700	0.74	+0.7
3,533,206	+		PGA1_c33700	0.75	+0.6
3,533,208	-		PGA1_c33700	0.75	-2.6
3,533,273	+		PGA1_c33700	0.79	+1.1
3,533,291	+		PGA1_c33700	0.80	+0.7
3,533,299	-		PGA1_c33700	0.80	+0.4
3,533,355	-		PGA1_c33700	0.84	+0.9
3,533,364	-		PGA1_c33700	0.84	-0.9
3,533,445	-		PGA1_c33700	0.90	-0.9
3,533,465	-				+1.0
3,533,481	-				+1.2
3,533,525	+				+0.2
3,533,533	-				+0.7
3,533,533	-				+1.1
3,533,565	-				+0.7
3,533,565	-				+0.4
3,533,591	+				-0.2
3,533,591	+				+0.3
3,533,591	+				+0.3
3,533,591	+				+0.5
3,533,591	+				+0.9
3,533,591	+				-0.5
3,533,591	+				+0.3
3,533,591	+				-0.2
3,533,591	+				+0.9
3,533,591	+				+0.0
3,533,591	+				+1.0
3,533,591	+				-1.0
3,533,599	-				-0.8
3,533,599	-				-0.7
3,533,599	-				-0.4
3,533,599	-				+1.9
3,533,599	-				+1.5
3,533,599	-				+0.5
3,533,599	-				+0.8
3,533,599	-				+0.3
3,533,599	-				+0.6
3,533,599	-				-2.8
3,533,599	-				+0.3
3,533,599	-				+1.3
3,533,604	+				+0.3
3,533,604	+				-1.1
3,533,604	+				-0.2
3,533,604	+				-0.1
3,533,604	+				+0.1
3,533,604	+				+0.8
3,533,604	+				-0.5
3,533,604	+				-0.9
3,533,604	+				+0.3
3,533,604	+				+0.0
3,533,604	+				+0.5
3,533,604	+				-2.5
3,533,604	+				+0.6
3,533,604	+				-1.4
3,533,604	+				-0.2
3,533,604	+				+1.9
3,533,604	+				-0.4
3,533,604	+				+0.8
3,533,604	+				-1.2
3,533,604	+				+0.4
3,533,604	+				+0.4
3,533,604	+				+0.0
3,533,604	+				+0.2
3,533,607	-				+1.3
3,533,612	-				+0.4
3,533,612	-				-0.4
3,533,612	-				-0.5
3,533,612	-				-0.2
3,533,612	-				+0.7
3,533,612	-				-1.0
3,533,612	-				+0.0
3,533,612	-				+0.8
3,533,612	-				-0.7
3,533,612	-				+0.0
3,533,612	-				-0.9
3,533,612	-				+1.8
3,533,612	-				-0.3
3,533,612	-				+0.5
3,533,612	-				+0.9
3,533,612	-				+0.6
3,533,612	-				+1.8
3,533,612	-				+0.2
3,533,612	-				+0.2
3,533,612	-				+0.1
3,533,612	-				+0.2
3,533,612	-				+2.2
3,533,612	-				+0.1
3,533,612	-				-0.2
3,533,612	-				+0.4
3,533,612	-				+0.1
3,533,612	-				+0.2
3,533,612	-				+0.2
3,533,612	-				-1.2
3,533,612	-				-0.8
3,533,612	-				+0.5
3,533,613	+				-0.7
3,533,657	+				-0.2
3,533,689	+				+1.0
3,533,689	+				+1.3
3,533,689	+				-0.6
3,533,689	+				-0.4
3,533,689	+				+0.4
3,533,689	+				+0.6
3,533,689	+				+1.1
3,533,689	+				-0.0
3,533,689	+				+0.3
3,533,689	+				-1.0
3,533,697	-				-0.4
3,533,697	-				+0.6
3,533,697	-				-1.2
3,533,697	-				-0.5
3,533,697	-				+0.2
3,533,697	-				+0.1
3,533,697	-				-0.4
3,533,697	-				-0.7
3,533,697	-				-0.5
3,533,697	-				-0.6
3,533,706	-				-0.2
3,533,723	-				+0.5
3,533,725	+				+0.3
3,533,730	+				+0.3
3,533,732	+				+0.9
3,533,740	-				-1.1
3,533,781	+				-0.4
3,533,781	+				+0.5
3,533,781	+				-1.3
3,533,784	-				+0.4
3,533,823	+				+0.2
3,533,823	+				+0.9
3,533,823	+				-0.6
3,533,823	+				+0.1
3,533,823	+				-1.1
3,533,823	+				+0.5
3,533,823	+				+0.9
3,533,823	+				-0.3
3,533,829	-				+0.8
3,533,831	-				-0.7
3,533,831	-				+0.3
3,533,831	-				-0.2
3,533,831	-				-1.2
3,533,831	-				+0.3
3,533,831	-				+0.0
3,533,831	-				-0.3
3,533,831	-				+1.1
3,533,831	-				+0.6
3,533,831	-				-1.3
3,533,831	-				+0.7
3,533,831	-				-0.0
3,533,831	-				+0.0
3,533,870	+				-0.0
3,533,878	+				-0.1
3,533,878	-				-0.1
3,533,930	-				-0.8
3,533,943	-				+1.1
3,533,943	-				+0.2
3,533,965	+				-1.1
3,533,965	+				-0.4
3,533,973	-				+0.3
3,533,973	-				+0.3
3,533,973	-				-0.4
3,533,973	-				+0.4
3,533,973	-				+0.4
3,533,973	-				-1.8
3,533,975	+				+1.0
3,533,975	+				+1.3
3,533,983	-				+0.2
3,533,983	-				+2.0
3,533,983	-				+0.0
3,533,983	-				-2.3
3,533,994	+				+1.3
3,534,025	+				-0.7
3,534,025	+				-0.2
3,534,025	-				+1.2
3,534,033	-		PGA1_c33710	0.10	-1.7
3,534,066	+		PGA1_c33710	0.14	+1.7
3,534,066	+		PGA1_c33710	0.14	-0.1
3,534,066	+		PGA1_c33710	0.14	+0.0
3,534,068	-		PGA1_c33710	0.14	+0.2
3,534,069	-		PGA1_c33710	0.14	+0.6
3,534,070	+		PGA1_c33710	0.14	-0.4
3,534,070	+		PGA1_c33710	0.14	+1.0
3,534,073	-		PGA1_c33710	0.14	+0.2
3,534,073	-		PGA1_c33710	0.14	+1.3
3,534,073	-		PGA1_c33710	0.14	-0.6
3,534,089	+		PGA1_c33710	0.16	-0.3
3,534,089	+		PGA1_c33710	0.16	+1.5
3,534,089	+		PGA1_c33710	0.16	+0.0
3,534,097	-		PGA1_c33710	0.17	+0.0
3,534,097	-		PGA1_c33710	0.17	-1.0
3,534,103	-		PGA1_c33710	0.17	+0.8
3,534,135	-		PGA1_c33710	0.21	-0.6
3,534,145	-		PGA1_c33710	0.22	-0.0
3,534,209	+		PGA1_c33710	0.28	+0.2
3,534,212	+		PGA1_c33710	0.28	-2.4
3,534,212	+		PGA1_c33710	0.28	-0.1
3,534,255	+		PGA1_c33710	0.33	+0.5
3,534,271	+		PGA1_c33710	0.34	+0.2
3,534,273	+		PGA1_c33710	0.35	-0.9
3,534,278	+		PGA1_c33710	0.35	+0.1
3,534,330	-		PGA1_c33710	0.40	+1.5
3,534,352	+		PGA1_c33710	0.42	+0.8
3,534,371	+		PGA1_c33710	0.44	-0.3
3,534,374	-		PGA1_c33710	0.45	-0.7
3,534,379	-		PGA1_c33710	0.45	-1.5
3,534,420	+		PGA1_c33710	0.49	-1.0
3,534,426	+		PGA1_c33710	0.50	-0.0
3,534,433	-		PGA1_c33710	0.51	+0.2
3,534,475	+		PGA1_c33710	0.55	-1.1
3,534,475	+		PGA1_c33710	0.55	+0.6
3,534,475	+		PGA1_c33710	0.55	-0.0
3,534,475	+		PGA1_c33710	0.55	-0.4
3,534,475	+		PGA1_c33710	0.55	-1.0
3,534,477	-		PGA1_c33710	0.55	+0.1
3,534,483	-		PGA1_c33710	0.56	-1.3
3,534,483	-		PGA1_c33710	0.56	-0.4
3,534,483	-		PGA1_c33710	0.56	+0.5
3,534,485	+		PGA1_c33710	0.56	+0.9
3,534,543	+		PGA1_c33710	0.62	+1.7
3,534,556	+		PGA1_c33710	0.63	+0.9
3,534,564	-		PGA1_c33710	0.64	-1.5
3,534,566	-		PGA1_c33710	0.64	+0.4
3,534,577	-		PGA1_c33710	0.65	+0.5
3,534,600	+		PGA1_c33710	0.67	-0.9
3,534,604	+		PGA1_c33710	0.68	-0.8
3,534,607	-		PGA1_c33710	0.68	+1.3
3,534,609	+		PGA1_c33710	0.68	-1.0
3,534,609	+		PGA1_c33710	0.68	+0.4
3,534,609	+		PGA1_c33710	0.68	+1.9