Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c27050

Experiment: m.b. Choline Lysine 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Choline Lysine 3 mM
2,819,052	+		PGA1_c27040	0.16	-0.2
2,819,079	+		PGA1_c27040	0.19	-0.0
2,819,087	+		PGA1_c27040	0.20	-0.1
2,819,130	+		PGA1_c27040	0.24	-0.1
2,819,181	-		PGA1_c27040	0.29	-1.2
2,819,226	+		PGA1_c27040	0.33	+1.4
2,819,229	-		PGA1_c27040	0.34	+1.1
2,819,248	-		PGA1_c27040	0.35	+0.7
2,819,252	+		PGA1_c27040	0.36	+0.5
2,819,269	-		PGA1_c27040	0.37	+1.1
2,819,288	-		PGA1_c27040	0.39	+0.4
2,819,449	+		PGA1_c27040	0.55	-1.2
2,819,455	-		PGA1_c27040	0.56	-2.2
2,819,485	+		PGA1_c27040	0.59	+1.1
2,819,490	+		PGA1_c27040	0.59	-0.7
2,819,493	-		PGA1_c27040	0.59	+2.1
2,819,493	-		PGA1_c27040	0.59	+0.2
2,819,495	+		PGA1_c27040	0.60	-2.1
2,819,503	-		PGA1_c27040	0.60	+0.1
2,819,531	+		PGA1_c27040	0.63	+1.1
2,819,551	+		PGA1_c27040	0.65	+0.8
2,819,551	+		PGA1_c27040	0.65	-0.5
2,819,559	-		PGA1_c27040	0.66	-0.5
2,819,600	-		PGA1_c27040	0.70	+1.1
2,819,633	-		PGA1_c27040	0.73	+0.3
2,819,741	-		PGA1_c27040	0.84	+1.5
2,819,799	-		PGA1_c27040	0.89	-0.2
2,819,859	+				-0.0
2,820,066	+				-0.9
2,820,085	+				+0.6
2,820,112	-		PGA1_c27050	0.11	+0.6
2,820,114	+		PGA1_c27050	0.11	+1.4
2,820,149	-		PGA1_c27050	0.13	+0.1
2,820,298	+		PGA1_c27050	0.23	-0.5
2,820,298	+		PGA1_c27050	0.23	+0.0
2,820,306	-		PGA1_c27050	0.23	+0.1
2,820,306	-		PGA1_c27050	0.23	-0.9
2,820,306	-		PGA1_c27050	0.23	-0.2
2,820,306	-		PGA1_c27050	0.23	+0.4
2,820,306	-		PGA1_c27050	0.23	-0.9
2,820,306	-		PGA1_c27050	0.23	-0.5
2,820,368	+		PGA1_c27050	0.28	+0.4
2,820,403	+		PGA1_c27050	0.30	+0.2
2,820,411	-		PGA1_c27050	0.30	+0.7
2,820,418	+		PGA1_c27050	0.31	+1.7
2,820,426	-		PGA1_c27050	0.31	-0.2
2,820,432	-		PGA1_c27050	0.32	+1.6
2,820,542	+		PGA1_c27050	0.39	-0.5
2,820,594	-		PGA1_c27050	0.42	+1.1
2,820,594	-		PGA1_c27050	0.42	+0.1
2,820,603	+		PGA1_c27050	0.43	+1.1
2,820,611	-		PGA1_c27050	0.44	+2.4
2,820,642	+		PGA1_c27050	0.46	+1.5
2,820,645	-		PGA1_c27050	0.46	+0.8
2,820,655	-		PGA1_c27050	0.46	+1.1
2,820,660	-		PGA1_c27050	0.47	-1.8
2,820,669	+		PGA1_c27050	0.47	+1.7
2,820,804	-		PGA1_c27050	0.56	-1.5
2,820,950	+		PGA1_c27050	0.66	+0.7
2,820,982	-		PGA1_c27050	0.68	-0.2
2,821,059	+		PGA1_c27050	0.73	-0.1
2,821,075	-		PGA1_c27050	0.74	+0.4
2,821,085	+		PGA1_c27050	0.75	+0.1
2,821,093	-		PGA1_c27050	0.75	+0.9
2,821,177	-		PGA1_c27050	0.81	-0.9
2,821,196	-		PGA1_c27050	0.82	+1.1
2,821,266	+		PGA1_c27050	0.87	+1.5
2,821,274	-		PGA1_c27050	0.87	+1.1
2,821,294	+		PGA1_c27050	0.89	+0.6
2,821,302	-		PGA1_c27050	0.89	+1.4
2,821,304	-		PGA1_c27050	0.89	+1.0
2,821,304	-		PGA1_c27050	0.89	+1.1
2,821,388	+				+0.8
2,821,396	-				+0.8
2,822,024	+		PGA1_c27060	0.33	+0.4
2,822,032	-		PGA1_c27060	0.33	+0.5
2,822,037	-		PGA1_c27060	0.33	-1.9
2,822,124	-		PGA1_c27060	0.38	-2.1
2,822,450	-		PGA1_c27060	0.57	+0.1
2,822,458	+		PGA1_c27060	0.57	-0.5