Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c23210

Experiment: m.b. Choline Lysine 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Choline Lysine 3 mM
2,406,894	+		PGA1_c23200	0.26	-0.2
2,406,902	-		PGA1_c23200	0.27	+0.0
2,406,983	+		PGA1_c23200	0.35	-1.3
2,407,016	+		PGA1_c23200	0.38	-0.6
2,407,016	+		PGA1_c23200	0.38	-0.6
2,407,016	+		PGA1_c23200	0.38	+0.4
2,407,016	+		PGA1_c23200	0.38	-1.2
2,407,016	+		PGA1_c23200	0.38	+0.4
2,407,016	+		PGA1_c23200	0.38	+1.6
2,407,026	-		PGA1_c23200	0.39	-0.2
2,407,034	-		PGA1_c23200	0.40	+0.3
2,407,272	-		PGA1_c23200	0.63	-0.6
2,407,276	-		PGA1_c23200	0.64	+0.3
2,407,317	+		PGA1_c23200	0.68	+1.2
2,407,329	+		PGA1_c23200	0.69	+0.7
2,407,378	+		PGA1_c23200	0.74	+0.7
2,407,391	-		PGA1_c23200	0.75	-0.0
2,407,413	-		PGA1_c23200	0.77	-1.8
2,407,423	+		PGA1_c23200	0.78	-0.3
2,407,490	+		PGA1_c23200	0.85	-0.2
2,407,490	+		PGA1_c23200	0.85	-0.3
2,407,509	+		PGA1_c23200	0.86	-0.6
2,407,509	+		PGA1_c23200	0.86	+0.4
2,407,546	+				+0.0
2,407,563	-				+1.3
2,407,583	+				-0.4
2,407,641	-				+0.3
2,407,642	+				+0.5
2,407,648	+				-0.3
2,407,650	-				-1.2
2,407,661	-				-0.8
2,407,684	-				+0.1
2,407,723	-				-0.1
2,407,758	+				+0.7
2,407,790	-				-0.5
2,407,798	-				-1.3
2,407,956	+		PGA1_c23210	0.35	+0.6
2,408,001	+		PGA1_c23210	0.47	+0.2
2,408,012	+		PGA1_c23210	0.50	-0.8
2,408,071	+		PGA1_c23210	0.65	-2.0
2,408,079	-		PGA1_c23210	0.67	+0.4
2,408,112	-		PGA1_c23210	0.75	-1.3
2,408,112	-		PGA1_c23210	0.75	+1.3
2,408,114	+		PGA1_c23210	0.76	+1.8
2,408,234	-				+0.4
2,408,278	+				-2.0
2,408,298	+				+1.5
2,408,306	-				-0.5
2,408,312	+				+0.6
2,408,341	+				-0.0
2,408,349	-				+0.2
2,408,358	-				-0.8
2,408,506	-				+1.2
2,408,554	-		PGA1_c23220	0.11	+1.0
2,408,708	+		PGA1_c23220	0.23	+1.0
2,408,708	+		PGA1_c23220	0.23	-0.8
2,408,809	+		PGA1_c23220	0.31	-0.3
2,408,841	+		PGA1_c23220	0.33	+0.2
2,408,921	+		PGA1_c23220	0.39	-0.1
2,408,921	+		PGA1_c23220	0.39	-0.4
2,409,066	-		PGA1_c23220	0.50	+0.3
2,409,074	-		PGA1_c23220	0.51	+1.0
2,409,174	+		PGA1_c23220	0.59	+1.5
2,409,182	-		PGA1_c23220	0.59	-0.4
2,409,189	+		PGA1_c23220	0.60	+0.6
2,409,189	-		PGA1_c23220	0.60	+0.1