Strain Fitness in Phaeobacter inhibens DSM 17395 around PGA1_c20800

Experiment: m.b. Choline Lysine 3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Choline Lysine 3 mM
2,156,389	+				-0.9
2,156,393	+				-0.2
2,156,395	+				+1.0
2,156,395	+				-0.8
2,156,395	+				-0.9
2,156,395	+				-0.5
2,156,395	+				-1.3
2,156,395	+				-0.6
2,156,395	+				+1.7
2,156,395	+				-0.0
2,156,397	-				+0.3
2,156,397	-				-0.2
2,156,403	-				-0.0
2,156,403	-				-0.0
2,156,403	-				+0.1
2,156,403	-				-0.0
2,156,403	-				-0.1
2,156,403	-				+2.6
2,156,450	+				+0.0
2,156,450	+				+1.8
2,156,456	-				-0.2
2,156,568	-		PGA1_c20800	0.15	-0.2
2,156,661	+		PGA1_c20800	0.33	-0.0
2,156,661	+		PGA1_c20800	0.33	+0.2
2,156,674	-		PGA1_c20800	0.35	+0.6
2,156,770	+		PGA1_c20800	0.54	+0.2
2,156,770	+		PGA1_c20800	0.54	+0.4
2,156,770	+		PGA1_c20800	0.54	+1.2
2,156,778	-		PGA1_c20800	0.56	+0.8
2,156,778	-		PGA1_c20800	0.56	+2.0
2,156,788	-		PGA1_c20800	0.58	-1.4
2,156,788	-		PGA1_c20800	0.58	+0.2
2,156,813	+		PGA1_c20800	0.62	-0.0
2,156,813	+		PGA1_c20800	0.62	-0.4
2,156,813	+		PGA1_c20800	0.62	+2.8
2,156,813	+		PGA1_c20800	0.62	+1.6
2,156,813	+		PGA1_c20800	0.62	+0.8
2,156,821	-		PGA1_c20800	0.64	+1.5
2,156,821	-		PGA1_c20800	0.64	+0.5
2,156,912	+		PGA1_c20800	0.82	-0.0
2,156,913	-		PGA1_c20800	0.82	+1.8
2,156,987	-				-0.5
2,157,079	+				-1.6
2,157,083	-				+1.0
2,157,134	+				-1.3
2,157,184	-				+1.7
2,157,193	-				-0.2
2,157,194	-				+0.3
2,157,194	-				-0.2
2,157,199	+				-0.0
2,157,199	+				+0.5
2,157,201	-				+0.3
2,157,239	+				+0.4
2,157,257	-				+1.2
2,157,310	+				-1.9
2,157,310	+				+0.3
2,157,360	-		PGA1_c20810	0.12	-0.4
2,157,379	+		PGA1_c20810	0.13	-2.0
2,157,390	-		PGA1_c20810	0.14	+0.5
2,157,476	+		PGA1_c20810	0.21	+2.7
2,157,476	+		PGA1_c20810	0.21	-2.4
2,157,478	+		PGA1_c20810	0.21	-0.7
2,157,659	+		PGA1_c20810	0.35	+0.1
2,157,769	+		PGA1_c20810	0.43	-0.0
2,157,771	+		PGA1_c20810	0.43	+0.2
2,157,783	+		PGA1_c20810	0.44	+0.6
2,157,803	+		PGA1_c20810	0.46	-0.4
2,157,816	-		PGA1_c20810	0.47	-0.4
2,157,816	-		PGA1_c20810	0.47	-0.2
2,157,831	+		PGA1_c20810	0.48	+0.4
2,157,872	+		PGA1_c20810	0.51	+0.1
2,157,961	-		PGA1_c20810	0.58	+1.1
2,157,994	+		PGA1_c20810	0.61	+0.5